Showing papers by "University of Seville published in 2001"

Perfectly monodisperse microbubbling by capillary flow focusing.

Abstract: Here we report a simple microfluidics phenomenon which allows the efficient mass production of micron size gas bubbles with a perfectly monodisperse and controllable diameter. It resorts on a self-excited breakup phenomenon (which locks at a certain frequency) of a short gas microligament coflowing in a focused liquid stream. In this work, we describe the physics of the phenomenon and obtain closed expressions for the bubble diameter as a function of the liquid and gas properties, geometry, and flow parameters, from a large set of experimental results.

Cellular Mechanism of Oxygen Sensing

Abstract: O2 sensing is a fundamental biological process necessary for adaptation of living organisms to variable habitats and physiological situations. Cellular responses to hypoxia can be acute or chronic. Acute responses rely mainly on O2-regulated ion channels, which mediate adaptive changes in cell excitability, contractility, and secretory activity. Chronic responses depend on the modulation of hypoxia-inducible transcription factors, which determine the expression of numerous genes encoding enzymes, transporters and growth factors. O2-regulated ion channels and transcription factors are part of a widely operating signaling system that helps provide sufficient O2 to the tissues and protect the cells against damage due to O2 deficiency. Despite recent advances in the molecular characterization of O2-regulated ion channels and hypoxia-inducible factors, several unanswered questions remain regarding the nature of the O2 sensor molecules and the mechanisms of interaction between the sensors and the effectors. Current models of O2 sensing are based on either a heme protein capable of reversibly binding O2 or the production of oxygen reactive species by NAD(P)H oxidases and mitochondria. Complete molecular characterization of the hypoxia signaling pathways will help elucidate the differential sensitivity to hypoxia of the various cell types and the gradation of the cellular responses to variable levels of PO2. A deeper understanding of the cellular mechanisms of O2 sensing will facilitate the development of new pharmacological tools effective in the treatment of diseases such as stroke or myocardial ischemia caused by localized deficits of O2.

Differentiation of Tea (Camellia sinensis) Varieties and Their Geographical Origin According to their Metal Content

Abstract: The metal content of 46 tea samples, including green, black, and instant teas, was analyzed. Al, Ba, Ca, Cu, Fe, K, Mg, Mn, Na, Sr, Ti, and Zn were determined by ICP-AES. Potassium, with an average content of 15145.4 mg kg(-1) was the metal with major content. Calcium, magnesium, and aluminum had average contents of 4252.4, 1978.2, and 1074.0 mg kg(-1), respectively. The average amount of manganese was 824.8 mg kg(-1). There were no clear differences between the metal contents of green and black teas. Pattern recognition methods such as principal component analysis (PCA), linear discriminant analysis (LDA), and artificial neural networks (ANN), were applied to differentiate the tea types. LDA and ANN provided the best results in the classification of tea varieties. These chemometric procedures were also useful for distinguishing between Asian and African teas and between the geographical origin of different Asian teas.

Comparison of leaf construction costs in woody species with differing leaf life-spans in contrasting ecosystems

Abstract: ummary • The construction costs (CC) are reported of leaves from 162 wild woody species from 14 contrasting environments (desert to rain forest) and with different leaf life-spans. • Calorimetric methods were used to estimate the CC of deciduous, semideciduous and evergreen leaves. • Leaf CC showed a wide range (78%) between species, and deciduous species showed a slightly lower CC (6%) than both semideciduous and evergreen species. Mean leaf CC differed between ecosystems, with the highest and lowest CC in the tundra and rain forest, respectively. Leaf CC was positively correlated with lipid concentration. Leaf size (log) and specific leaf area (SLA, leaf area per leaf dry mass) were negatively correlated with leaf CC. Leaf CC did not show differences between different leaf life-spans or ecosystems when leaf size (log) or SLA were included as covariates. • The small differences in leaf CC among leaf life-span types and ecosystems (6% and 23%, respectively) suggest that SLA is more important in determining differences in the carbon balance between species than leaf CC. Leaf size is shown to be an important trait associated with other leaf characteristics. Abbreviations A, ash concentration; CC, construction cost per unit dry mass; CCA, construction cost per unit area; Eg, growth efficiency; Hc, ash free heat of combustion; N, nitrogen; SLA, specific leaf area.

The dielectrophoretic and travelling wave forces generated by interdigitated electrode arrays: analytical solution using Fourier series

Abstract: In alternating current electrokinetics, electric fields are used to generate forces on particles. Techniques have been applied for the manipulation of particles and the measurement of their dielectric properties. The fields are typically generated by microelectrode structures fabricated on planar surfaces. One particular design, using interdigitated bar electrodes, is used both in dielectrophoretic field flow fractionation and travelling wave dielectrophoresis. This paper presents a Fourier series analysis of the dielectrophoretic force on a particle generated by this type of electrode array, for both dielectrophoresis and travelling wave dielectrophoresis. Simple expressions are derived for the force at a distance of the order of the electrode spacing from the electrodes. A full analytical expression is given for the dielectrophoretic force in two dimensions. Comparisons are made with previously published experimental observations.

Comparison of proline accumulation in two mediterranean shrubs subjected to natural and experimental water deficit

Abstract: The effect of water stress on proline accumulation was tested in two contrasted species of Mediterranean scrub: Halimium halimifolium (L.) Willk and Pistacia lentiscus L. Leaf water potential, stomatal resistance and proline content have been measured both in experimental and in natural water stress conditions. Both species accumulated proline in their leaves when leaf water potential dropped below a threshold value of −3.0 MPa, under natural as well as under experimental conditions. In the field, however, a time-lag between decrease of leaf water potential and proline accumulation could be observed. In Halimium halimifolium, proline accumulation appeared to be associated with severe stress conditions as most plants with high proline contents suffered irreversible wilting, especially in the greenhouse. P. lentiscus showed a different pattern, accumulating proline at two different times of the year, as a response to cold or to drought. The results of our study indicated that the role of proline in this species, rather than an osmotic agent, seems to be more related to a protective action in cases of severe stress conditions.

Salmonella enterica serovar Typhimurium response involved in attenuation of pathogen intracellular proliferation.

Abstract: Salmonella enterica serovar Typhimurium proliferates within cultured epithelial and macrophage cells. Intracellular bacterial proliferation is, however, restricted within normal fibroblast cells. To characterize this phenomenon in detail, we investigated the possibility that the pathogen itself might contribute to attenuating the intracellular growth rate. S. enterica serovar Typhimurium mutants were selected in normal rat kidney fibroblasts displaying an increased intracellular proliferation rate. These mutants harbored loss-of-function mutations in the virulence-related regulatory genes phoQ, rpoS, slyA, and spvR. Lack of a functional PhoP-PhoQ system caused the most dramatic change in the intracellular growth rate. phoP- and phoQ-null mutants exhibited an intracellular growth rate 20- to 30-fold higher than that of the wild-type strain. This result showed that the PhoP-PhoQ system exerts a master regulatory function for preventing bacterial overgrowth within fibroblasts. In addition, an overgrowing clone was isolated harboring a mutation in a previously unknown serovar Typhimurium open reading frame, named igaA for intracellular growth attenuator. Mutations in other serovar Typhimurium virulence genes, such as ompR, dam, crp, cya, mviA, spiR (ssrA), spiA, and rpoE, did not result in pathogen intracellular overgrowth. Nonetheless, lack of either SpiA or the alternate sigma factor RpoE led to a substantial decrease in intracellular bacterial viability. These results prove for the first time that specific serovar Typhimurium virulence regulators are involved in a response designed to attenuate the intracellular growth rate within a nonphagocytic host cell. This growth-attenuating response is accompanied by functions that ensure the viability of intracellular bacteria.

New issues about nitric oxide and its effects on the gastrointestinal tract.

Abstract: Over the last years the important role of nitric oxide (NO) as endogenous modulator of numerous physiological functions has been shown. NO is involved in the regulation of blood flow, maintenance of vascular tone, control of platelet aggregation, and modulation of the activity of the mastocytes. It also plays a key role as neurotransmitter in the central and peripheric nervous system (non adrenergic non colinergic, NANC, neurons), in the nervous control of the cerebral blood flow and in the neuroendocrine regulation or synaptic plasticity. However, NO shows a dual behavior: at physiological concentrations, released through the constitutive synthase (cNOS), it regulates house-keeping functions, whereas its overproduction by the inducible isoenzyme (iNOS) exhibits cytotoxic activity because interacting with reactive species producing peroxinitrites (ONOO) and other compounds, which are highly damaging for the tissues. In the gastrointestinal tract (GIT) NO participates in the modulation of the smooth musculature tone, such as the regulation of intestinal peristaltism, gastric emptying and antral motor activity. It also regulates acid and gastric mucus secretion, alkaline production, and is involved in the maintenance of mucosal blood flow. In physiological conditions, NO acts as an endogenous mediator modulating both, the repairing and integrity of the tissues, and exhibits gastroprotective properties against different types of aggressive agents. However, high concentrations of NO are related to numerous pathological processes of GIT including peptic ulcer, chronic gastritis, gastrointestinal cancer, bacterial gastroenteritis, and celiac or chronic inflammatory bowel diseases. Recently, this hypothesis that cNOS is always beneficial and iNOS is always deleterious, has been questioned, since that a series of data suggest that the increase of cNOS activity could be responsible for the derived pathological changes an d, by contrast, NO liberated by the inducible isoenzyme might play a reparing effect in certain pathological disorders. The pharmaceutical industry is really interested in proving the clinical benefits of the mediator. Numerous NO-donor drugs, nitrate derivatives, have been frequently used in the cardiovascular diseases due to their vasodilating properties, which allow an enhancement of coronary blood flow. More recently, the protective effect of NO against non steroidal antiinflammatory drugs (NSAID)-gastroenteropathy has been shown, because its vasodilating and antioxidant properties render it a potentially useful agent. Different NSAID, including acetyl salicylic acid, diclofenac or naproxen, have been formulated by attaching a NO releasing-moiety. These NO-NSAID, antiinflammatories combined with precursors of the mediator, or with inhibitors of the inducible synthase, are currently being evaluated. However, although the pharmacotherapeutical possibilities of NO are considerable, it is necessary to elucidate the exact mechanisms derived from stimulation inhibition of the isoenzymes in order to determine the clinic al utility of NO-donors.

Mathematical justification of the hydrostatic approximation in the primitive equations of geophysical fluid dynamics

Abstract: Geophysical fluids all exhibit a common feature: their aspect ratio (depth to hori- zontal width) is very small. This leads to an asymptotic model widely used in meteorology, oceanog- raphy, and limnology, namely the hydrostatic approximation of the time-dependent incompressible Navier-Stokes equations. It relies on the hypothesis that pressure increases linearly in the vertical direction. In the following, we prove a convergence and existence theorem for this model by means of anisotropic estimates and a new time-compactness criterium.

Wavelet and neural structure: a new tool for diagnostic of power system disturbances

Abstract: The Fourier transform can be used for the analysis of nonstationary signals, but the Fourier spectrum does not provide any time-domain information about the signal. When the time localization of the spectral components is needed, a wavelet transform giving the time-frequency representation of the signal must be used. In this paper, using wavelet analysis and neural systems as a new tool for the analysis of power system disturbances, disturbances are automatically detected, compacted and classified. An example showing the potential of these techniques for diagnosis of actual power system disturbances is presented.

Hpr1 is preferentially required for transcription of either long or G+C-rich DNA sequences in Saccharomyces cerevisiae.

Abstract: Hpr1 forms, together with Tho2, Mft1, and Thp2, the THO complex, which controls transcription elongation and genome stability in Saccharomyces cerevisiae. Mutations in genes encoding the THO complex confer strong transcription-impairment and hyperrecombination phenotypes in the bacterial lacZ gene. In this work we demonstrate that Hpr1 is a factor required for transcription of long as well as G+C-rich DNA sequences. Using different lacZ segments fused to the GAL1 promoter, we show that the negative effect of lacZ sequences on transcription depends on their distance from the promoter. In parallel, we show that transcription of either a long LYS2 fragment or the S. cerevisiae YAT1 G+C-rich open reading frame fused to the GAL1 promoter is severely impaired in hpr1 mutants, whereas transcription of LAC4, the Kluyveromyces lactis ortholog of lacZ but with a lower G+C content, is only slightly affected. The hyperrecombination behavior of the DNA sequences studied is consistent with the transcriptional defects observed in hpr1 cells. These results indicate that both length and G+C content are important elements influencing transcription in vivo. We discuss their relevance for the understanding of the functional role of Hpr1 and, by extension, the THO complex.

Are Antarctic suspension-feeding communities different from those elsewhere in the world?

Abstract: This paper reviews the trophic ecology of benthic suspension feeders in Antarctic shelf communities, studied within SCAR’s EASIZ Programme, in comparison with published information from other seas. Dense benthic suspension-feeder communities capture large quantities of particles and may directly regulate primary, and indirectly, secondary production in littoral food chains. Most work has been performed in temperate and tropical seas; however, little is known about suspension feeders in cold environments. Recent studies on Antarctic littoral benthic suspension feeders suggest the period of winter inactivity may last only a few weeks. This contrasts with the hypothesis that in Antarctic communities there is a prolonged period of minimal activity lasting at least 6 months during the austral winter. Results from other oceans may explain how dense benthic communities could develop under such conditions. Alternative food sources, i.e. the “fine fraction”, sediment resuspension, lateral advection and efficient food assimilation may play a significant role in the development of suspension-feeder dominated, very diversified, high biomass and three-dimensionally structured communities on the Antarctic shelf.

Protective effects upon experimental inflammation models of a polyphenol-supplemented virgin olive oil diet.

Abstract: Objective and Design: The aim of the present study was to examine the effect of a virgin olive oil enriched diet in acute and chronic inflammation models in rats and to determine the effect of supplementing this oil with a higher content of its polyphenolic fraction. The response was compared to oils rich in monounsaturated fatty acids (high oleic sunflower oil and palm olein) and rich in polyunsaturated fatty acids (fish oil).¶Diets: Groups of 6-8 male Wistar rats were fed from weaning on six purified diets differing in type of oil: 2 % corn oil (basal diet, BD), 15 % high oleic sunflower oil (HOSO), 15 % virgin olive oil (VOO), 15 % virgin olive oil supplemented with 600 p.p.m. polyphenols from this oil (PSVOO), 15 % palm olein (POL), and 15 % fish oil (FO).¶Materials and methods: Rats were fed for 8 weeks with BD, HOSO, VOO, PSVOO, POL and FO diets before injecting carrageenan. Rats were fed for 3 weeks with BD, PSVOO and FO diets before induction of adjuvant arthritis. Dietary treatment with or without indomethacin continued during 3 weeks. The data were evaluated using an analysis of variance (ANOVA) followed by the least-significant differences.¶Results: In carrageenan oedema test, the inflammation indices of animals fed on a diet rich in olive oil (VOO) were lower compared to animals fed with oils high in oleic acid (HOSO, POL) and polyunsaturated fatty acids (FO), and markedly diminished in the group fed on PSVOO. In established adjuvant arthritis, the PSVOO diet was even more effective than FO diet in the prevention of inflammation. Both groups of animals showed an increase in weight during the latter days of the experiment compared to the BD. Indomethacin administered to every diet group, exerted a strong inhibitory effect on the inflammatory process throughout which was augmented by the PSVOO and FO diets.¶Conclusions: This study demonstrates that virgin olive oil with a higher content of polyphenolic compounds, similar to that of extra virgin olive oil, shows protective effects in both models of inflammation and improves the disease associated loss of weight. This supplementation also augmented the effects of drug therapy.¶

Human securin, hPTTG, is associated with Ku heterodimer, the regulatory subunit of the DNA-dependent protein kinase

Abstract: We have previously isolated the hpttg proto-oncogene, which is expressed in normal tissues containing proliferating cells and in several kinds of tumors. In fact, expression of hPTTG correlates with cell proliferation in a cell cycle-dependent manner. Recently it was reported that PTTG is a vertebrate analog of the yeast securins Pds1 and Cut2, which are involved in sister chromatid separation. Here we show that hPTTG binds to Ku, the regulatory subunit of the DNA-dependent protein kinase (DNA-PK). hPTTG and Ku associate both in vitro and in vivo and the DNA-PK catalytic subunit phosphorylates hPTTG in vitro. Furthermore, DNA double-strand breaks prevent hPTTG–Ku association and disrupt the hPTTG–Ku complexes, indicating that genome damaging events, which result in the induction of pathways that activate DNA repair mechanisms and halt cell cycle progression, might inhibit hPTTG–Ku interaction in vivo. We propose that hPTTG might connect DNA damage-response pathways with sister chromatid separation, delaying the onset of mitosis while DNA repair occurs.

A single gene for lycopene cyclase, phytoene synthase, and regulation of carotene biosynthesis in Phycomyces

Abstract: Previous complementation and mapping of mutations that change the usual yellow color of the Zygomycete Phycomyces blakesleeanus to white or red led to the definition of two structural genes for carotene biosynthesis. We have cloned one of these genes, carRA, by taking advantage of its close linkage to the other, carB, responsible for phytoene dehydrogenase. The sequences of the wild type and six mutants have been established, compared with sequences in other organisms, and correlated with the mutant phenotypes. The carRA and carB coding sequences are separated by 1,381 untranslated nucleotides and are divergently transcribed. Gene carRA contains separate domains for two enzymes, lycopene cyclase and phytoene synthase, and regulates the overall activity of the pathway and its response to physical and chemical stimuli from the environment. The lycopene cyclase domain of carRA derived from a duplication of a gene from a common ancestor of fungi and Brevibacterium linens; the phytoene synthase domain is similar to the phytoene and squalene synthases of many organisms; but the regulatory functions appear to be specific to Phycomyces.

A stochastic pitchfork bifurcation in a reaction-diffusion equation

Abstract: We study in some detail the structure of the random attractor for the Chafee-Infante reaction-diffusion equation perturbed by a multiplicative white noise, d u = ( Δ u + β u - u 3 ) d t + σ u o d W t , x ∈ D ⊂ R m First we prove, for m ⩽ 5, a lower bound on the dimension of the random attractor, which is of the same order in β as the upper bound we derived in an earlier paper, and is the same as that obtained in the deterministic case. Then we show, for m = 1, that as β passes through λ 1 (the first eigenvalue of the negative Laplacian) from below, the system undergoes a stochastic bifurcation of pitchfork type. We believe that this is the first example of such a stochastic bifurcation in an infinite–dimensional setting. Central to our approach is the existence of a random unstable manifold.