Showing papers in "Biodiversity and Conservation in 2014"
TL;DR: In this article, the authors stress the need to frame research and policy jointly; promote inter-and trans-disciplinary research and "multi-domain" working groups that include both scientists and policy makers from various fields and sectors; and put in place structures and incentive schemes that support interactive dialogue in the long-term.
Abstract: A better, more effective dialogue is needed between biodiversity science and policy to underpin the sustainable use and conservation of biodiversity. Many initiatives exist to improve communication, but these largely conform to a ‘linear’ or technocratic model of communication in which scientific “facts” are transmitted directly to policy advisers to “solve problems”. While this model can help start a dialogue, it is, on its own, insufficient, as decision taking is complex, iterative and often selective in the information used. Here, we draw on the literature, interviews and a workshop with individuals working at the interface between biodiversity science and government policy development to present practical recommendations aimed at individuals, teams, organisations and funders. Building on these recommendations, we stress the need to: (a) frame research and policy jointly; (b) promote inter- and trans-disciplinary research and “multi-domain” working groups that include both scientists and policy makers from various fields and sectors; (c) put in place structures and incentive schemes that support interactive dialogue in the long-term. These are changes that are needed in light of continuing loss of biodiversity and its consequences for societal dependence on and benefits from nature.
226 citations
TL;DR: Minimum principles for standardizing information that should be reported in all peer-reviewed papers are presented, believing that standardised reporting enables more robust comparisons among studies, facilitates national and global reviews, enables greater ease of study replication, and leads to improved wildlife research and management outcomes.
Abstract: Camera traps are used by scientists and natural resource managers to acquire ecological data, and the rapidly increasing camera trapping literature highlights how popular this technique has become. Nevertheless, the methodological information reported in camera trap publications can vary widely, making replication of the study difficult. Here we propose a series of guiding principles for reporting methods and results obtained using camera traps. Attributes of camera trapping we cover include: (i) specifying the model(s) of camera traps(s) used, (ii) mode of deployment, (iii) camera settings, and (iv) study design. In addition to suggestions regarding best practice data coding and analysis, we present minimum principles for standardizing information that we believe should be reported in all peer-reviewed papers. Standardised reporting enables more robust comparisons among studies, facilitates national and global reviews, enables greater ease of study replication, and leads to improved wildlife research and management outcomes.
225 citations
TL;DR: Ass associations between habitat disturbance and functional diversity of ants and termites—two numerically dominant and functionally important taxa in tropical rain forests that perform key roles in predation, decomposition, nutrient cycling and seed dispersal are investigated.
Abstract: Forested tropical landscapes around the world are being extensively logged and converted to agriculture, with serious consequences for biodiversity and potentially ecosystem functioning. Here we investigate associations between habitat disturbance and functional diversity of ants and termites—two numerically dominant and functionally important taxa in tropical rain forests that perform key roles in predation, decomposition, nutrient cycling and seed dispersal. We compared ant and termite occurrence and composition within standardised volumes of soil and dead wood in old growth forest, logged forest and oil palm plantation in Sabah, Malaysian Borneo. Termites occurred substantially less frequently in converted habitats than in old growth forest, whereas ant occurrences were highest in logged forest and lowest in old growth forest. All termite feeding groups had low occurrence in disturbed habitats, with soil feeders occurring even less frequently than wood feeders. Ant functional groups showed more variable associations, with some opportunist and behaviourally dominant groups being more abundant in degraded habitats. The importance of ants and termites in tropical ecosystems and such differing patterns of assemblage variation suggest that ecosystem functioning may be significantly altered in converted habitats.
123 citations
TL;DR: An attitudinal survey on wildlife consumption and conservation awareness was conducted in Beijing, Shanghai, Guangzhou, Kunming and Nanning of China recently as mentioned in this paper, which showed that the consumption of wildlife was mostly driven by utilitarian motivation, and mainly for food.
Abstract: An attitudinal survey on wildlife consumption and conservation awareness was conducted in Beijing, Shanghai, Guangzhou, Kunming and Nanning of China recently. Comparison with the results from a similar survey we did in 2004, after 8 years, the proportion of respondents who had consumed wildlife was dropped slightly from 31.3 % down to 29.6 %. It showed that the rates of wildlife consumed as food and as ingredients for traditional medicines in Guangzhou and Nanning ranked in the top. The consumptions in these two cities were mostly driven by utilitarian motivation, and mainly for food. Meanwhile, the rate of consumers taking wildlife as food was declining significantly in Beijing after 8 years. The results also showed that 52.7 % agreed that wildlife should not be consumed, which was significantly increased comparison with the survey result of 42.7 % in 2004. In addition, respondents agreed that wildlife could be used significantly decline from 42.8 to 34.8 %. It’s indicated that wildlife conservation awareness was raised in China in the past years. We also founded that consumers with higher income and higher educational background were having higher wildlife consumption rate. It suggested that to strengthen the law enforcement and to promote the public awareness were keys to reduce wildlife consumption in China.
104 citations
TL;DR: It was found that both bee abundance and richness increased in neighborhoods with higher human population density, as did visitation to purple coneflower flower heads, suggesting that the positive relationship between people and bees was mediated by the effect of people on floral resources.
Abstract: Despite the global trend in urbanization, little is known about patterns of biodiversity or provisioning of ecosystem services in urban areas. Bee communities and the pollination services they provide are important in cities, both for small-scale urban agriculture and native gardens. To better understand this important ecological issue, we examined bee communities, their response to novel floral resources, and their potential to provide pollination services in 25 neighborhoods across Chicago, IL (USA). In these neighborhoods, we evaluated how local floral resources, socioeconomic factors, and surrounding land cover affected abundance, richness, and community composition of bees active in summer. We also quantified species-specific body pollen loads and visitation frequencies to potted flowering purple coneflower plants (Echinacea purpurea) to estimate potential pollination services in each neighborhood. We documented 37 bee species and 79 flowering plant genera across all neighborhoods, with 8 bee species and 14 flowering plant genera observed on average along each neighborhood block. We found that both bee abundance and richness increased in neighborhoods with higher human population density, as did visitation to purple coneflower flower heads. In more densely populated neighborhoods, bee communities shifted to a suite of species that carry more pollen and are more active pollinators in this system, including the European honey bee (Apis mellifera) and native species such as Agapostemon virescens. More densely populated neighborhoods also had a greater diversity of flowering plants, suggesting that the positive relationship between people and bees was mediated by the effect of people on floral resources. Other environmental variables that were important for bee communities included the amount of grass/herbaceous cover and solar radiation in the surrounding area. Our results indicate that bee communities and pollination services can be maintained in dense urban neighborhoods with single-family and multi-family homes, as long as those neighborhoods contain diverse and abundant floral resources.
103 citations
TL;DR: This review highlights mechanisms, which include photoprotection, photochemical quenching, and high osmotic values to avoid water loss, and in some groups flexibility of secondary cell walls to maintain turgor pressure even in water-limited situations.
Abstract: Green algae are major components of biological soil crusts in alpine habitats. Together with cyanobacteria, fungi and lichens, green algae form a pioneer community important for the organisms that will succeed them. In their high altitudinal habitat these algae are exposed to harsh and strongly fluctuating environmental conditions, mainly intense irradiation, including ultraviolet radiation, and lack of water leading to desiccation. Therefore, green algae surviving in these environments must have evolved with either avoidance or protective strategies, as well as repair mechanisms for damage. In this review we have highlighted these mechanisms, which include photoprotection, photochemical quenching, and high osmotic values to avoid water loss, and in some groups flexibility of secondary cell walls to maintain turgor pressure even in water-limited situations. These highly specialized green algae will serve as good model organisms to study desiccation tolerance or photoprotective mechanisms, due to their natural capacity to withstand unfavorable conditions. We point out the urgent need for modern phylogenetic approaches in characterizing these organisms, and molecular methods for analyzing the metabolic changes involved in their adaptive strategies.
99 citations
TL;DR: In this article, the authors argue that biological soil crusts (biocrusts) have unique combinations of these features that should be more widely exploited in community, landscape and ecosystem ecology.
Abstract: Model systems have had a profound influence on the development of ecological theory and general principles. Compared to alternatives, the most effective models share some combination of the following characteristics: simpler, smaller, faster, general, idiosyncratic or manipulable. We argue that biological soil crusts (biocrusts) have unique combinations of these features that should be more widely exploited in community, landscape and ecosystem ecology. In community ecology, biocrusts are elucidating the importance of biodiversity and spatial pattern for maintaining ecosystem multifunctionality due to their manipulability in experiments. Due to idiosyncrasies in their modes of facilitation and competition, biocrusts have led to new models on the interplay between environmental stress and biotic interactions and on the maintenance of biodiversity by competitive processes. Biocrusts are perhaps one of the best examples of micro-landscapes—real landscapes that are small in size. Although they exhibit varying patch heterogeneity, aggregation, connectivity and fragmentation, like macro-landscapes, they are also compatible with well-replicated experiments (unlike macro-landscapes). In ecosystem ecology, a number of studies are imposing small-scale, low cost manipulations of global change or state factors in biocrust micro-landscapes. The versatility of biocrusts to inform such disparate lines of inquiry suggests that they are an especially useful model system that can enable researchers to see ecological principles more clearly and quickly.
91 citations
TL;DR: In this paper, the authors investigated the effect of climate change on amphibian species in the Atlantic Forest network of protected areas (PAs) and found that altitude was a good predictor of species gains or losses inside PAs.
Abstract: Only 7 % of the Atlantic Forest Biodiversity Hotspot is currently protected, though it holds 18 % of all amphibian species in South America. How effective would the Atlantic Forest network of protected areas (PAs) be in a changing climate? Are there some intrinsic features of PAs that drive species loss or gain inside them? We addressed these questions by modeling the ecological niches of 430 amphibian species in the Atlantic Forest and projecting their distributions into three future climate change simulations. We then assessed changes in species richness inside PAs for different time frames and tested their significance via null model. The number of species should decline within Atlantic Forest network of PAs under changing climate conditions. Only altitude was a good predictor of species gains or lost inside PAs. Therefore, we suggest that new PAs established in highlands would be more effective to alleviate the effects of climate change on this imperiled fauna.
91 citations
TL;DR: Although BSCs of the four European sites share a common set of bacteria, algae, lichens and bryophytes, first results indicate not only climate specific additions of species, but also genetic/phenotypic uniqueness of species between the four sites.
Abstract: Here we report details of the European research initiative “Soil Crust International” (SCIN) focusing on the biodiversity of biological soil crusts (BSC, composed of bacteria, algae, lichens, and bryophytes) and on functional aspects in their specific environment. Known as the so-called “colored soil lichen community” (Bunte Erdflechtengesellschaft), these BSCs occur all over Europe, extending into subtropical and arid regions. Our goal is to study the uniqueness of these BSCs on the regional scale and investigate how this community can cope with large macroclimatic differences. One of the major aims of this project is to develop biodiversity conservation and sustainable management strategies for European BSCs. To achieve this, we established a latitudinal transect from the Great Alvar of Oland, Sweden in the north over Gossenheim, Central Germany and Hochtor in the Hohe Tauern National Park, Austria down to the badlands of Tabernas, Spain in the south. The transect stretches over 20° latitude and 2,300 m in altitude, including natural (Hochtor, Tabernas) and semi-natural sites that require maintenance such as by grazing activities (Oland, Gossenheim). At all four sites BSC coverage exceeded 30 % of the referring landscape, with the alpine site (Hochtor) reaching the highest cyanobacterial cover and the two semi-natural sites (Oland, Gossenheim) the highest bryophyte cover. Although BSCs of the four European sites share a common set of bacteria, algae (including cyanobacteria) lichens and bryophytes, first results indicate not only climate specific additions of species, but also genetic/phenotypic uniqueness of species between the four sites. While macroclimatic conditions are rather different, microclimatic conditions and partly soil properties seem fairly homogeneous between the four sites, with the exception of water availability. Continuous activity monitoring of photosystem II revealed the BSCs of the Spanish site as the least active in terms of photosynthetic active periods.
89 citations
TL;DR: There is large variation in response to spatial and temporal dead wood patterns between different taxa and sub-groups, and several of the reviewed papers indicate that time-lagged effects deserve more attention, especially on a landscape scale and for specialized or red-listed species.
Abstract: Dead wood is a key substrate for forest biodiversity, hosting a rich and often threatened biodiversity of wood-living species. However, the relationship between the occurrence of dead wood and associated species is modified by several environmental factors. Here we review the present state of knowledge on how dead wood on different spatial and temporal scales affects saproxylic biodiversity. We searched for peer-reviewed studies on saproxylic species that compared dead wood distribution on at least two spatial or temporal scales. We scanned close to 300 articles, of which 34 fit our criteria. 20 studies were directed towards the current amount of dead wood at different scale levels and how this relates to the abundance or occurrence of saproxylic species, embracing scales from 10 m to 10 km. 14 studies compared time-lagged effects of dead wood, covering time-lags from 25 years to more than 200 years. The reviewed articles focused mainly on European forest and addressed invertebrates (mostly beetles), alone or in combination with fungi (27 articles), fungi (six articles), or lichens (one article). Although the significance of dead wood for forest biodiversity is firmly established, the reviewed studies show that we still have limited knowledge of the relationship between saproxylic biodiversity and spatial and temporal scales. Based on the reviewed studies, we conclude that there is large variation in response to spatial and temporal dead wood patterns between different taxa and sub-groups. Still, several of the reviewed papers indicate that time-lagged effects deserve more attention, especially on a landscape scale and for specialized or red-listed species. Further work is required before firm management recommendations can be suggested.
84 citations
TL;DR: In this article, the response of different successional stages to raindrop erosivity and underlying influences was investigated using single drop simulated rainfall, the erosion controlling capacities of biocrusts were analyzed from an energetic perspective.
Abstract: Biological soil crusts (biocrusts) are ubiquitous living covers in arid and semiarid regions, playing a critical role in soil erosion control in semiarid regions. So far, research separating the multiple mechanisms of erosion control by biocrusts has been limited. It was problematic to link the influence of biocrusts to existing erosion models. In the present study, the response of biocrusts of different successional stages to raindrop erosivity and underlying influences was investigated. Using single drop simulated rainfall, the erosion controlling capacities of biocrusts were analyzed from an energetic perspective. The results showed that biocrusts caused a dramatic improvement of soil erosion resistance, which depended on species composition and increased considerably with higher succession stages. While the accumulated raindrop kinetic energy sustained by dark cyanobacterial crusts was 0.93 J (~15 times higher than that of bare soil), that of 60 % moss covered crusts reached values up to 20.18 J (~342 times higher than that of bare soil) and for 80 % moss covered crusts even 24.59 J were measured. Besides the composition and successional stages, the resistance of biocrusts to raindrop erosivity was related to the substrate soil moisture, soil texture, slope gradients and seasonal variation. The accumulated raindrop kinetic energy measured for cyanobacterial crusts was highest on silty, followed by loamy and sandy soil. For moss-dominated crusts raindrop kinetic energy was highest on sandy, followed by silty and loamy soil. Dry biocrust samples reached significantly higher accumulated raindrop kinetic energies compared to moist biocrusts, whereas the moisture content within moist crusts did not have a significant influence. Erosion resistance increased significantly with higher slope gradients. The resistance capacities of biocrusts during monsoon and post-monsoon were significantly higher than these of pre-monsoon biocrusts. Our results suggest that the influence of biocrusts can be included into erosion models from an energy point of view. The raindrop kinetic energy resistance capacity provides a potential bridge between biocrust succession and soil erodibility in commonly used erosion models.
TL;DR: Deer impact on Mediterranean shrublands is causing biotic homogenization of plant communities and is threatening vegetation dynamics by forcing it to return to earlier succession stages.
Abstract: Land-use change and current game management have favored an increasing population of wild ungulates (especially deer) in many regions of the Northern Hemisphere. Here, we assess the impact of high deer densities (>30 ind km−2) on the highly diverse woody vegetation of Mediterranean ecosystems, where big game have been favored for the last decades. We examine whether prolonged deer browsing (over 30 years) affected plant composition, diversity and dynamics of the original (non-browsed) vegetation. Deer browsing led to an average decrease of 30.4 % in woody plant diversity (species richness), due to a lack of regeneration for the most preferred plant species. Species belonging to early stages of succession (mostly Labiatae and Cistaceae) were non-preferred by deer. Conversely, the most preferred species belonged mainly to late stages of plant succession. Deer impact on Mediterranean shrublands is causing biotic homogenization of plant communities and is threatening vegetation dynamics by forcing it to return to earlier succession stages. Strict deer population control favouring larger trophies but lower offspring numbers together with an adequate habitat management (increasing grass and acorn availability) would be the most efficient measures to reverse this diversity loss. Restoration work seems only appropriate for the most vulnerable species. We highlight the need of sampling deer-free areas with low or null historical browsing to assess the real impact of deer on woody plant diversity and vegetation dynamics.
TL;DR: The results indicate that wood-inhabiting fungi are responsive to forest management intended to promote the structural attributes of old-growth northern hardwood forests.
Abstract: Experimental canopy gap formation and additions of coarse woody debris (CWD) are techniques intended to mimic the disturbance regime and accelerate the development of northern hardwood forests. The effects of these techniques on biodiversity and ecosystem functioning were investigated by surveying the abundance and diversity of wood-inhabiting fungi in six treatments: (i) unharvested control, (ii) control ? fenced to exclude deer, (iii) gap creation ? fenced to exclude deer, (iv) gap creation, (v) gap cre- ation ? CWD addition, and (vi) CWD addition under closed-canopy. A total of 1,885 fungal occurrences (polyporoid and corticoid fruiting bodies) representing 130 species were recorded on 11 tree species, with eight fungal species accounting for 52 % of all observations. A linear mixed model demonstrated significant differences in the abundance and diversity of wood-inhabiting fungi by treatment, with the gap creation ? CWD addition treatment supporting the highest abundance and richness of fungal species. Non-
TL;DR: It was showed that human activity and the size of patches of remnant rainforest were important factors influencing the richness of mammal species in oil palm landscapes, and strategies to promote the persistence of both high and low conservation value species should be adopted as part of a strengthened certification scheme for oil palm production.
Abstract: Global oil palm expansion has caused substantial ecological damage to tropical biodiversity. We quantified wild mammal richness in large oil palm plantation estates and semi-traditional oil palm smallholdings in Peninsular Malaysia. We sampled 41 plantation estates and 14 smallholdings, and used line-transect surveys coupled with semi-structured interviews to develop a database of the native mammals found in oil palm landscapes. Semi-structured interviews revealed a total of 32 mammal species, including 13 IUCN Red Listed taxa of high conservation value. Our results showed that human activity and the size of patches of remnant rainforest were important factors influencing the richness of mammal species in oil palm landscapes. More carnivorous and herbivorous species were reported in smallholdings than plantation estates, most probably as a response to greater habitat heterogeneity in smallholdings. All species, irrespective of conservation status, were more likely to be recorded in oil palm plantation estates and smallholdings that supported large areas of native forest. Our findings suggest that biodiversity conservation in oil palm landscapes will require a variety of conservation approaches. Minimizing poaching, reducing disturbance from human activity, and protecting existing forest patches appear particularly important. Strategies to promote the persistence of both high and low conservation value species should be adopted as part of a strengthened certification scheme for oil palm production.
TL;DR: The results imply that the AUC does not appropriately measure changes in the discrimination of models, and it is especially incapable of distinguishing between models with high discrimination capacity.
Abstract: Species distribution modelling has become a common approach in ecology in the last decades. As in any modelling exercise, evaluation of the predicted suitability surfaces is a key process, and the area under the receiver operating characteristic (ROC) curve (AUC) has become the most popular statistic for this purpose. A close covariation between the AUC and threshold-dependent discrimination measures (sensitivity Se and specificity Sp) raises into question the advantage of the threshold-independence of the AUC. In this study, the relationship between the AUC and several threshold-dependent discrimination measures is characterized in detail, and the sensitivity of the pattern to variations in the shape of the ROC curve is assessed. Hypothetical suitability values, coming from normal and skew-normal distributions, were simulated for both instances of presence and absence. The flexibility of the skew-normal distribution allowed for the simulation of a wide range of ROC curve configurations. The relationship between the AUC and threshold-dependent measures was graphically assessed; independently of the ROC curve shape, a nonlinear asymptotic relationship between the AUC and Se (and Sp) was obtained after applying the threshold that makes Se = Sp. A nonlinear asymptotic relationship between the AUC and the Youden index was also reported. These results imply that the AUC does not appropriately measure changes in the discrimination of models, and it is especially incapable of distinguishing between models with high discrimination capacity. Se or Sp derived from the application of the threshold that makes them equal is a preferred measure of discrimination power. Together with the rate of false positives and negatives, and with the prevalence of the species, these statistics provide more information about the discrimination capacity of the models than the AUC.
TL;DR: This paper reviews the available evidence and demonstrates that while the links between biodiversity and health seem intuitive, they are very difficult to prove.
Abstract: The Millennium Ecosystem Assessment and other commentators have warned about the impacts that biodiversity decline will have on human health. There is no doubting that the natural world provides mankind with the majority of the resources required to sustain life and health. Many species provide food, fuel, medicines; with the potential for many more (as of yet) undiscovered uses for various species. Despite this, there have been very few attempts to actually investigate relationships between biodiversity (i.e. number of species, rather than the ability of specific species to provide health benefits) and human health. This paper reviews the available evidence and demonstrates that while the links between biodiversity and health seem intuitive, they are very difficult to prove. Socio-economics has a huge influence on health status and the exploitation of natural resources (leading to eventual biodiversity loss) tends to have a positive economic effects. More direct effects of biodiversity on health include the diversity of the internal microbiome, the effect of natural diversity on our mental health and well-being (although this has large social aspects with many people feeling fearful in very diverse environments). Still to be elucidated are the tipping points where the level of global biodiversity loss is such that human health can no longer be sustained.
TL;DR: In this article, the change of the pore system of three different successional stages of BSCs, as well as their respective subcrusts in the NW Negev desert, was investigated.
Abstract: Biological soil crusts (BSCs) can play an important role in hydrological cycles, especially in dryland ecosystems where the availability of water is limited. Many factors influence the hydrological behavior of BSCs, one of which is the microstructure. In order to describe the influence of the soil microstructure of BSCs on water redistribution, we investigated the change of the pore system of three different successional stages of BSCs, as well as their respective subcrusts in the NW Negev desert, Israel, using 2-dimensional thin sections, as well as non-invasive X-ray 3D computed microtomography (XCMT) and mercury intrusion porosimetry. Our results show that the pore system undergoes significant changes during crust succession. Both the total porosity, as well as the pore sizes significantly increased from cyano- to lichen- to mosscrust and the pore geometry changed from tortuous to straight pore shapes. We introduce two new mechanisms that contribute to the hydrological properties of the BSCs in the NW Negev that impede infiltration: (i) vesicular pores and (ii) a discontinuous pore system with capillary barrier effects, caused by a rapid change of grain sizes due to sand burial. Since both of these mechanisms are present mostly in early stage cyanobacterial crusts and their abundance decreases strongly with succession, it is very likely that they influence BSC hydrology to different extents in the various crust types and that they are partly responsible for differences in runoff in the NW Negev.
TL;DR: It is indicated that the composition of soil prokaryotes varies at a small scale not only in adjacent soil layers but also in BSC-forming lichen species, probably representing a case of fungal-bacterial interaction.
Abstract: Biological soil crusts (BSCs) provide important ecosystem
services in dryland regions, including erosion control and
contribution to nitrogen and CO2 fixation. As soil
microorganisms are still rarely studied within the context of
biodiversity planning, we describe, as a contribution to the
Soil Crust International project, an approach that addresses
this gap in biodiversity assessments. The purpose of the
present study was a characterization of prokaryotic communities
of BSCs formed by two species of lichenized fungi, Psora
decipiens and Toninia sedifolia, in relation to surrounding
BSCs and the below-crust soil layer from Tabernas basin
(Almeria, Spain). Microbial community profiles were determined
using 454 pyrosequencing targeting the V4 hypervariable region
of the bacterial and archaeal 16S rRNA gene. The majority of
the 65,497 sequences obtained belonged to Proteobacteria
(mainly Alphaproteobacteria), Actinobacteria, Bacteroidetes and
Cyanobacteria. Cyanobacteria were more abundant at the soil
surface but rare in below-crust soils, whilst below-crust soils
harbored significantly more Acidobacteria, Verrucomicrobia,
Gemmatimonadetes, Planctomycetes and Armatimonadetes.
Additionally, terricolous lichens were investigated using
fluorescence in situ hybridization in conjunction with confocal
laser scanning microscopy, the objective being to illustrate
bacterial niches in BSC-forming lichens. Bacteria were mainly
present at the upper cortex of the squamules and attachment
organs. Our findings indicate that the composition of soil
prokaryotes varies at a small scale not only in adjacent soil
layers but also in BSC-forming lichen species. Furthermore,
bacteria were shown to be attached to fungal structures,
probably representing a case of fungal-bacterial interaction.
TL;DR: This paper argues that functional traits have to be functional, meaning that they have to demonstrably effect or respond to ecosystem processes, and following the insights of BEFR they should experimentally be tested too.
Abstract: The current definition of a functional trait as any trait that is linked to growth, reproduction and survival is problematic. With this logic all traits within an organism can be defined as functional, because there is no one trait that is not linked to these processes. Such a definition, therefore, hinders the realignment of functional traits with biodiversity-ecosystem functioning relationship (BEFR) and is also out of sync with taxonomy resulting in an unfortunate view of functional diversity as a combination of any available morphological, physiological and life-history traits. This paper argues that functional traits have to be functional, meaning that they have to demonstrably effect or respond to ecosystem processes, and following the insights of BEFR they should experimentally be tested too. The recent crop of studies comparing taxonomical versus functional diversity appears to be conceptually flawed, as they conflate trait-based and species-based approaches. If the focus is on the trait-based approach, then taxonomic diversity should be comprised of trait information too, which is given in the species taxonomic descriptions and not just species richness. Instead of the concept of functional traits being easier and quicker than species-based assessment, it is actually more demanding, and the burden of proof for identifying functional traits is much higher. Demonstrating that a trait plays a crucial role in ecosystem processes (i.e. functional) requires a far greater understanding of the organism and its interaction with the environment. The effort put on the functional traits, however considerable, may yield novel insights that are not possible with species-based approach.
TL;DR: It is emphasized that direct predation processes should not be the only factor considered in the management of invasive cats on islands, and that knowledge of these impacts can be of great importance to preserve insular ecosystem functions and persistence of endangered native species.
Abstract: The domestic cat has been introduced on most islands worldwide, where it has established feral populations and is currently known to be one of the worst invasive mammalian predators. Predation is the strongest deleterious effect of cats on wildlife, inducing a direct negative impact on population size and dynamics, breeding success and changes in species assemblages. Direct predation is not the only damaging impact on native wildlife, since cats can be responsible for other poorly-documented underlying ecological impacts, like competition, hybridization, disease transmission, ecological process alteration, and behavioral change. Here, we pinpoint relevant examples of these ecological impacts, by searching for accurate data from published literature. We used electronic databases covering most of the world islands where the effects of cats were documented. Knowledge of these impacts can be of great importance to preserve insular ecosystem functions and persistence of endangered native species. We emphasize that direct predation processes should not be the only factor considered in the management of invasive cats on islands.
TL;DR: In this paper, the diversity of harvested wild orchid species and their collection sites in Iran were determined and the current harvest status and trade chain and volume to estimate the total orchid plant extraction from natural populations.
Abstract: Wild orchids are traditionally harvested as Salep and used in traditional medicine and ice-cream production in Iran. Recently however, illegal harvest of wild orchids for export appears to have grown. This study aimed to: (1) determine the diversity of harvested wild orchid species and their collection sites in Iran; and (2) study the current harvest status and trade chain and volume to estimate the total orchid plant extraction from natural populations. Field surveys of collectors and market surveys of traders were conducted to establish the diversity of collected species, to identify harvest hotspots, and to document harvesting and trade volumes. Sixteen species and subspecies from 7 genera of Orchidaceae are collected for their tubers. Based on estimates from the 2013 April to June harvest season more than 24.5 tons of fresh tubers were collected from three districts in Golestan province alone. It is estimated that this amount of tuber requires the lethal destructive harvesting of 5.5 –6.1 million orchids, with a market value of 320,000 USD. In the Tehran Bazar Salep trade during May–July 2013 was 1.9 tons of dried tubers, with estimated retail value of 310,000 USD. Current orchid collection practices in Iran, which have soared in recent years due to international demand, do not seem sustainable as all tubers are collected destructively. To preserve orchid populations, in the longterm, establishment of specific Orchid Conservation Areas and introduction of sustainable production practices, could alleviate harvesting pressure. In the midterm, development of a DNA barcoding-based molecular identification system could help to monitor and control illegal trade. In the near term, effective implementation of collection bans in excessively harvested areas and strengthening of current regulations are necessary to avoid the catastrophic effects of harvesting on orchid populations, as has been observed in Turkey.
TL;DR: The seed longevity of 172 species sourced from across the mega-diverse flora of the Australia continent was determined and Seeds sourced from regions of higher mean annual temperature and rainfall were significantly longer-lived than seeds from cooler and drier regions, although both environmental factors were weakly associated with longevity.
Abstract: Management of seed banks conserving the biodiversity of phylogenetically diverse species requires insight into seed longevity. This study determined the seed longevity of 172 species sourced from across the mega-diverse flora of the Australia continent. Seeds were aged via a controlled ageing experiment through storage at 45 °C and 60 % RH, or 60 °C and 60 % RH, and regularly tested for germination. Relative seed longevity between species was determined by comparing the time to 50 % viability loss (p
50), calculated via probit analysis of seed survival curves. Seed, plant, and environmental traits were examined for associations with longevity. The p
50 values varied between species from 3.0 to 588.6 days. Serotinous species, and woody trees and shrubs, had significantly longer-lived seeds than geosporous species, and species of herbaceous habit. Seeds that possess physical dormancy, and seeds with large embryos with little endosperm, were also long-lived. There was a weak, but significant, positive correlation between seed mass and longevity. Seeds sourced from regions of higher mean annual temperature and rainfall were significantly longer-lived than seeds from cooler and drier regions, although both environmental factors were weakly associated with longevity. Compared with species from other regions of the world, prolonged longevity is a feature of many Australian species. Nevertheless, seed life-spans vary substantially between species and close consideration of seed traits along with biotic and abiotic components of the plants and their environment can assist to differentiate between potentially long- and short-lived seeds.
TL;DR: In this paper, the authors used text messages on Twitter to quantify the level of public attention toward different mammal and bird species listed under the United States' Endangered Species Act (ESA).
Abstract: Knowledge about the level of public attention toward different species is crucial to successful conservation. The evolution of online social networks offers new possibilities for collecting data about public interest. Building on an analysis of text messages on Twitter, this study aimed to quantify the level of public attention toward different mammal and bird species listed (at the full species or subspecies/population level) under the United States’ Endangered Species Act (ESA). Once a month during 1 year, I searched recently posted messages (‘tweets’) for the common names of every listed species. The polar bear (Ursus maritimus) was by far the most tweeted species. The other most tweeted mammals were the American bison (Bison bison), brown bear (U. arctos), cougar (Puma concolor), killer whale (Orcinus orca), black bear (U. americanus) and West Indian manatee (Trichechus manatus), respectively. The three most frequently tweeted birds were the sandhill crane (Grus canadensis), whooping crane (G. americana) and spotted owl (Strix occidentalis). Some species, such as the manatee, right whale (Eubalaena glacialis), and gray wolf (Canis lupus) ranked higher when restricting the search to conservation contexts. The results suggest that Twitter users interact about a biased sample of ESA-listed species: mammals were better represented than birds among the most tweeted species and larger-sized species received more tweets. The findings can be used for prioritizing conservation education and marketing campaigns aiming to raise the profile of lesser-known listed species. Data from online social networks open the door for a range of novel applications in conservation science.
TL;DR: This paper analyses the recent wave of investments in farm land in Central Africa, and discusses their specificity, the ways the host countries deal with investors, and the impacts of these large-scale projects on livelihoods and on forest cover.
Abstract: Large-scale land-based investments in Central Africa are not new, and the first decade of the twenty-first century saw renewed interest in agriculture by foreign investors. The new rush for farm land has involved new multi-national holdings in the region and sometimes in the sector. This paper analyses the recent wave of investments in farm land, and discusses their specificity, the ways the host countries deal with investors, and the impacts of these large-scale projects on livelihoods and on forest cover. It focuses on the four countries that host most of the natural forests in the Congo Basin: Cameroon, Gabon, the Democratic Republic of Congo, and the Republic of Congo. The analysis was based on a historical review of the scientific literature and of media reports. Results are based on the assessment of large-scale land acquisitions for agricultural expansion and on field surveys conducted in 2012 and 2013, during which key stakeholders were interviewed in the four countries.
TL;DR: In this article, the authors summarize information pertaining to the mechanisms by which biodiversity functions to provide ecosystem services including: production, pest control, pollination, resilience, nutrient cycling, seed dispersal, and water quality and quantity.
Abstract: Planted forests are increasingly contributing wood products and other ecosystem services at a global scale. These forests will be even more important as carbon markets develop and REDD-plus forest programs (forests used specifically to reduce atmospheric emissions of CO2 through deforestation and forest degradation) become common. Restoring degraded and deforested areas with long-rotation planted forests can be accomplished in a manner that enhances carbon storage and other key ecosystem services. Knowledge from natural systems and understanding the functioning novel of ecosystems can be instructive for planning and restoring future forests. Here we summarize information pertaining to the mechanisms by which biodiversity functions to provide ecosystem services including: production, pest control, pollination, resilience, nutrient cycling, seed dispersal, and water quality and quantity and suggest options to improve planted forest management, especially for REDD-plus.
TL;DR: It is found that climatic variation on the non-breeding grounds, especially passage regions, typically influenced migrants’ breeding phenology and demography more strongly than equivalent variations on the breeding sites.
Abstract: Long distance migrants are declining more rapidly than residents, with birds that breed in Europe and winter in tropical Africa providing particularly clear examples. Causal mechanisms may include climate change, but are poorly understood partly because carry-over effects from non-breeding ranges can influence breeding performance. Using long-term data spanning four decades we assess how climatic variation in migrants’ winter, passage and breeding ranges determine timing of breeding and reproductive success. We do so for three Afro-European avian migrants of regional conservation concern (redstart, spotted flycatcher and wood warbler). We find that carry-over effects from passage regions consistently had stronger impacts on breeding phenology than breeding climate. Warm Mediterranean passage conditions promoted earlier breeding in all species, and redstarts also bred earlier following higher Sahel rainfall. Warmer springs on the breeding grounds promoted slightly earlier breeding in redstart and wood warbler, but not spotted flycatcher. Carry-over effects also typically influenced breeding performance to a greater extent than weather on the breeding grounds. Greater rainfall in the Sahel increased redstart brood size, warmer Mediterranean passage conditions increased spotted flycatcher brood size and, to a lesser extent, the number of wood warbler fledglings. In contrast to the concern regarding climate change impacts on migrants’ breeding grounds we found no evidence that warmer temperatures on the breeding grounds were associated with reduced reproductive performance. We thus find that climatic variation on the non-breeding grounds, especially passage regions, typically influenced migrants’ breeding phenology and demography more strongly than equivalent variation on the breeding sites. Such carry-over effects should be considered when assessing the causes of migrants’ marked population declines.
TL;DR: In this article, the authors conducted a full factorial experiment in two representative dryland ecosys-tems from central (Aranjuez) and southeastern (Sorbas) Spain to evaluate how precipita- tion, temperature and biocrust cover affected the assimilation and net C balance of biocusts.
Abstract: The importance of biological soil crusts (biocrusts) for the biogeochemistry of drylands is widely recognized. However, there are significant gaps in our knowledge about how climate change will affect these organisms and the processes depending on them. We conducted a manipulative full factorial experiment in two representative dryland ecosys- tems from central (Aranjuez) and southeastern (Sorbas) Spain to evaluate how precipita- tion, temperature and biocrust cover affected the assimilation and net C balance of biocrusts. Chlorophyll fluorescence, net photosynthesis and dark respiration were mea- sured in situ bimonthly during a year. We also conducted daily cycle measurements of net photosynthesis in winter and at the end of spring. In Sorbas, warming reduced the fixation of atmospheric C in biocrust-dominated microsites throughout the year. In Aranjuez, there was an interaction between the three factors evaluated; during winter, net photosynthesis was significantly greater in high biocrust cover plots under natural conditions and in the rainfall exclusion treatment. During the daily surveys, rainfall exclusion and warming reduced C fixation in Sorbas and in Aranjuez respectively. The effects of the treatments evaluated varied with the rainfall and non-rainfall water inputs (NRWIs) registered before
TL;DR: This study provides the first evidence of a regional grey squirrel population crash and suggests that European pine marten abundance may be a critical factor in the American grey squirrel’s success or failure as an invasive species.
Abstract: In Ireland, the UK and Italy, the invasive North American grey squirrel, Sciurus carolinensis, threatens the survival of the Eurasian red squirrel, Sciurus vulgaris, as the effects of competition and disease almost inevitably lead to total replacement of red squirrel populations. However the results of a recent national squirrel survey suggested that the normally invasive grey squirrel had gone into decline in the Irish midlands, which was anecdotally attributed to an increase in European pine marten, Martes martes, range and numbers. This study aimed to quantify changes in squirrel distribution in Ireland and to investigate the role, if any, of the pine marten in red and grey squirrel population dynamics. A distribution survey of the midlands was carried out which confirmed the grey squirrel population has crashed in approximately 9,000 km2 of its former range and the red squirrel is common after an absence of up to 30 years. At landscape level, pine marten and red squirrel abundance were positively correlated, whereas a strong negative correlation between pine marten and grey squirrel presence at woodland level was found to exist. Squirrel demographics were determined by means of live trapping programs which confirmed that the red squirrel in the midlands is now in competitive release and the grey squirrel is present at unusually low density. This study provides the first evidence of a regional grey squirrel population crash and suggests that European pine marten abundance may be a critical factor in the American grey squirrel’s success or failure as an invasive species.
TL;DR: It is suggested that the urban densification strongly impacted the assemblages of ground-dwelling arthropods by modifying both landscape and local properties of woodlands to be considered as a green planning policy, and the deleterious effects of urban density should be mitigated.
Abstract: Urban densification is often considered has a green planning policy. However, its effects on woodland arthropods have been rarely analysed. To fill this gap, a multi-taxa approach using three ground-dwelling arthropod assemblages was conducted on 11 woodlands located along an urbanisation gradient. The gradient range from rural areas to one of the most urbanized cities in the world: Paris (France). Spiders, ground beetles and rove beetles were sampled with pitfall traps. We addressed the two following questions: (i) do the responses to urbanisation differ between taxa and/or between trait groups (habitat affinity to woodlands and dispersal capability) along the gradient? (ii) do the richness and abundance show a linear or an intermediate response? Our results showed a replacement of forest and non-flying species by generalist species and flying species with an increasing level of urbanisation. In term of species richness and abundance, the response varied between taxonomical and also trait groups. Some groups showed a strong linear decrease like forest carabids but other groups like spiders showed maximum values at intermediate levels of urbanisation. However, after a threshold of 70 % of built-in area, urbanisation negatively affected the species richness of all taxa and almost all trait groups, with a stronger effect on forest species. We suggest that the urban densification strongly impacted the assemblages of ground-dwelling arthropods by modifying both landscape and local properties of woodlands. To be considered as a green planning policy, the deleterious effects of urban densification should be mitigated.
TL;DR: In this paper, the authors employed a nationally available light detection and ranging (LiDAR) remote sensing dataset to develop variables describing forest landscape structure across a large environmental gradient in Switzerland.
Abstract: Conservation and monitoring of forest biodiversity requires reliable information about forest structure and composition at multiple spatial scales. However, detailed data about forest habitat characteristics across large areas are often incomplete due to difficulties associated with field sampling methods. To overcome this limitation we employed a nationally available light detection and ranging (LiDAR) remote sensing dataset to develop variables describing forest landscape structure across a large environmental gradient in Switzerland. Using a model species indicative of structurally rich mountain forests (hazel grouse Bonasa bonasia), we tested the potential of such variables to predict species occurrence and evaluated the additional benefit of LiDAR data when used in combination with traditional, sample plot-based field variables. We calibrated boosted regression trees (BRT) models for both variable sets separately and in combination, and compared the models’ accuracies. While both field-based and LiDAR models performed well, combining the two data sources improved the accuracy of the species’ habitat model. The variables retained from the two datasets held different types of information: field variables mostly quantified food resources and cover in the field and shrub layer, LiDAR variables characterized heterogeneity of vegetation structure which correlated with field variables describing the understory and ground vegetation. When combined with data on forest vegetation composition from field surveys, LiDAR provides valuable complementary information for encompassing species niches more comprehensively. Thus, LiDAR bridges the gap between precise, locally restricted field-data and coarse digital land cover information by reliably identifying habitat structure and quality across large areas.