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Assessment of the generalization of learned image reconstruction and the potential for transfer learning

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TLDR
In this paper, the authors evaluated the generalization ability of learned image reconstruction with respect to deviations in the acquisition settings between training and testing, and provided an outlook for the potential of transfer learning to fine-tune trainings to a particular target application using only a small number of training cases.
Abstract
Purpose Although deep learning has shown great promise for MR image reconstruction, an open question regarding the success of this approach is the robustness in the case of deviations between training and test data. The goal of this study is to assess the influence of image contrast, SNR, and image content on the generalization of learned image reconstruction, and to demonstrate the potential for transfer learning. Methods Reconstructions were trained from undersampled data using data sets with varying SNR, sampling pattern, image contrast, and synthetic data generated from a public image database. The performance of the trained reconstructions was evaluated on 10 in vivo patient knee MRI acquisitions from 2 different pulse sequences that were not used during training. Transfer learning was evaluated by fine-tuning baseline trainings from synthetic data with a small subset of in vivo MR training data. Results Deviations in SNR between training and testing led to substantial decreases in reconstruction image quality, whereas image contrast was less relevant. Trainings from heterogeneous training data generalized well toward the test data with a range of acquisition parameters. Trainings from synthetic, non-MR image data showed residual aliasing artifacts, which could be removed by transfer learning-inspired fine-tuning. Conclusion This study presents insights into the generalization ability of learned image reconstruction with respect to deviations in the acquisition settings between training and testing. It also provides an outlook for the potential of transfer learning to fine-tune trainings to a particular target application using only a small number of training cases.

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An overview of deep learning in medical imaging focusing on MRI

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Deep Magnetic Resonance Image Reconstruction: Inverse Problems Meet Neural Networks

TL;DR: Several signal processing issues for maximizing the potential of deep reconstruction in fast MRI are discussed, which may facilitate further development of the networks and performance analysis from a theoretical point of view.
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Deep-Learning Methods for Parallel Magnetic Resonance Imaging Reconstruction: A Survey of the Current Approaches, Trends, and Issues

TL;DR: An overview of the recent machine-learning approaches that have been proposed specifically for improving parallel imaging is provided and a general background introduction to parallel MRI is given and structured around the classical view of image- and k-space-based methods.
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Plug-and-Play Methods for Magnetic Resonance Imaging: Using Denoisers for Image Recovery

TL;DR: This article describes the use of plug-and-play (PnP) algorithms for MRI image recovery and describes how the result of the PnP method can be interpreted as a solution to an equilibrium equation, allowing convergence analysis from this perspective.
References
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Deep learning

TL;DR: Deep learning is making major advances in solving problems that have resisted the best attempts of the artificial intelligence community for many years, and will have many more successes in the near future because it requires very little engineering by hand and can easily take advantage of increases in the amount of available computation and data.
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Image quality assessment: from error visibility to structural similarity

TL;DR: In this article, a structural similarity index is proposed for image quality assessment based on the degradation of structural information, which can be applied to both subjective ratings and objective methods on a database of images compressed with JPEG and JPEG2000.
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Sparse MRI: The application of compressed sensing for rapid MR imaging.

TL;DR: Practical incoherent undersampling schemes are developed and analyzed by means of their aliasing interference and demonstrate improved spatial resolution and accelerated acquisition for multislice fast spin‐echo brain imaging and 3D contrast enhanced angiography.
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Advances in sensitivity encoding with arbitrary k-space trajectories.

TL;DR: Using the proposed method, SENSE becomes practical with nonstandard k‐space trajectories, enabling considerable scan time reduction with respect to mere gradient encoding, and the in vivo feasibility of non‐Cartesian SENSE imaging with iterative reconstruction is demonstrated.
Journal ArticleDOI

Learning a variational network for reconstruction of accelerated MRI data.

TL;DR: In this paper, a variational network approach is proposed to reconstruct the clinical knee imaging protocol for different acceleration factors and sampling patterns using retrospectively and prospectively undersampled data.
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