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Journal ArticleDOI

Crystal structure of botulinum neurotoxin type A and implications for toxicity.

TLDR
The crystal structure of the entire 1,285 amino acid di-chain neurotoxin was determined and the toxin appears as a hybrid of varied structural motifs and suggests a modular assembly of functional subunits to yield pathogenesis.
Abstract
Botulinum neurotoxin type A (BoNT/A) is the potent disease agent in botulism, a potential biological weapon and an effective therapeutic drug for involuntary muscle disorders. The crystal structure of the entire 1,285 amino acid di-chain neurotoxin was determined at 3.3 A resolution. The structure reveals that the translocation domain contains a central pair of alpha-helices 105 A long and a approximately 50 residue loop or belt that wraps around the catalytic domain. This belt partially occludes a large channel leading to a buried, negative active site--a feature that calls for radically different inhibitor design strategies from those currently used. The fold of the translocation domain suggests a mechanism of pore formation different from other toxins. Lastly, the toxin appears as a hybrid of varied structural motifs and suggests a modular assembly of functional subunits to yield pathogenesis.

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Book ChapterDOI

CHAPTER 20 – Uptake and transport of Clostridium neurotoxins

TL;DR: The complexity of the CNT receptors, which are composed of multiple lipid and protein components, together with the high affinity of CNT for the neuronal membrane has led to the recent proposal that arrays of presynaptic receptors (APRs) are involved in CNT binding.
Journal ArticleDOI

Long-time molecular dynamics simulations of botulinum biotoxin type-A at different pH values and temperatures

TL;DR: The results show that certain parts of the protein are active at acidic pH environments or at high temperatures, and theprotein is more stable in neutral environments at normal human body temperature, whereas, at high temperature, the protein is morestable in acidic environments.
Patent

Engineered botulinum neurotoxin

TL;DR: In this article, botulinum neurotoxin (BoNT) polypeptides with a modified receptor binding domain with substitution mutations corresponding to substitution mutations in serotype B, strain 1, V1118M, Y1183M, E1191M, S 1199L, E 1191Q and S 119 9Y, or E 119 1 Q andS 119 9F were disclosed.
Journal ArticleDOI

Structural analysis of Clostridium botulinum neurotoxin type D as a platform for the development of targeted secretion inhibitors.

TL;DR: The suitability of botulinum neurotoxin, and serotype D in particular, as a basis for engineering novel secretion inhibitors is demonstrated and the robustness of the ‘LHn fold’ across serotypes and its use in engineering additional polypeptide components with added functionality is demonstrated.
References
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Journal ArticleDOI

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

TL;DR: The MOLSCRIPT program as discussed by the authors produces plots of protein structures using several different kinds of representations, including simple wire models, ball-and-stick models, CPK models and text labels.
Journal ArticleDOI

Improved methods for building protein models in electron density maps and the location of errors in these models.

TL;DR: In this paper, the authors describe strategies and tools that help to alleviate this problem and simplify the model-building process, quantify the goodness of fit of the model on a per-residue basis and locate possible errors in peptide and side-chain conformations.
Journal ArticleDOI

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

TL;DR: It is demonstrated in this work that the surface tension, water‐organic solvent, transfer‐free energies and the thermodynamics of melting of linear alkanes provide fundamental insights into the nonpolar driving forces for protein folding and protein binding reactions.
Journal ArticleDOI

Improved Fourier coefficients for maps using phases from partial structures with errors

TL;DR: In this article, a method is given to estimate the parameter σA in these phase probability expressions from the observed and calculated structure factor amplitudes, from which one can estimate the mean coordinate error for the model, and when there are coordinate errors, a new expression for the non-centric Fourier coefficients is required to suppress this model bias.
Journal ArticleDOI

Atomic structure of the ectodomain from HIV-1 gp41

TL;DR: X-ray crystallography determines the structure of the protease-resistant part of a gp41 ectodomain solubilized with a trimeric GCN4 coiled coil in place of the amino-terminal fusion peptide, and suggests a common mechanism for initiating fusion.
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