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Journal ArticleDOI

Crystal structure of botulinum neurotoxin type A and implications for toxicity.

TLDR
The crystal structure of the entire 1,285 amino acid di-chain neurotoxin was determined and the toxin appears as a hybrid of varied structural motifs and suggests a modular assembly of functional subunits to yield pathogenesis.
Abstract
Botulinum neurotoxin type A (BoNT/A) is the potent disease agent in botulism, a potential biological weapon and an effective therapeutic drug for involuntary muscle disorders. The crystal structure of the entire 1,285 amino acid di-chain neurotoxin was determined at 3.3 A resolution. The structure reveals that the translocation domain contains a central pair of alpha-helices 105 A long and a approximately 50 residue loop or belt that wraps around the catalytic domain. This belt partially occludes a large channel leading to a buried, negative active site--a feature that calls for radically different inhibitor design strategies from those currently used. The fold of the translocation domain suggests a mechanism of pore formation different from other toxins. Lastly, the toxin appears as a hybrid of varied structural motifs and suggests a modular assembly of functional subunits to yield pathogenesis.

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Citations
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Journal ArticleDOI

Classification of multi-family enzymes by multi-label machine learning and sequence-based descriptors

TL;DR: Three of seven pairs of homologous enzymes with different functions and eighteen of twenty-three distantly related enzymes with a similar family were correctly classified by the RAkEL-RF-CTD predictor, indicating the extensive applicability of the predictors.
Journal ArticleDOI

Structural insights into the functional role of the Hcn sub-domain of the receptor-binding domain of the botulinum neurotoxin mosaic serotype C/D

TL;DR: The crystal structure of BoNT/CD-HCR determined at 1.70 Å resolution is described with a tetraethylene glycol (PG4) moiety bound in a hydrophobic cleft between β-strands in the β-sheet jelly roll fold of the Hcn sub-domain of the BoNT-HCR.
Journal ArticleDOI

Engineering toxins for 21st century therapies.

TL;DR: The meeting explored how the current structural and mechanistic knowledge of toxins could be used to engineer future toxin‐based therapies and concluded that the clinical potential for development of novel biologics based on toxin domains was evident.
Journal ArticleDOI

Immune recognition of BoNTs A and B: how anti-toxin antibodies that bind to the heavy chain obstruct toxin action.

TL;DR: Some epitopes within the two toxins display substantial homology and occupy equivalent 3-D locations, occasionally showing a small shift relative to one another, consistent with recognition adjustments accommodating structural differences between the two BoNTs.
Book ChapterDOI

Absorption and Transport of Botulinum Neurotoxins

TL;DR: Botulinum neurotoxin is a potent toxin, which blocks the neurotransmitter release at neuromuscular junctions, and associates to nontoxic proteins (ANTPs), which have a main role in toxin protection against acidic pH and proteases, especially in the gastrointestinal tract.
References
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Journal ArticleDOI

MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures

TL;DR: The MOLSCRIPT program as discussed by the authors produces plots of protein structures using several different kinds of representations, including simple wire models, ball-and-stick models, CPK models and text labels.
Journal ArticleDOI

Improved methods for building protein models in electron density maps and the location of errors in these models.

TL;DR: In this paper, the authors describe strategies and tools that help to alleviate this problem and simplify the model-building process, quantify the goodness of fit of the model on a per-residue basis and locate possible errors in peptide and side-chain conformations.
Journal ArticleDOI

Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

TL;DR: It is demonstrated in this work that the surface tension, water‐organic solvent, transfer‐free energies and the thermodynamics of melting of linear alkanes provide fundamental insights into the nonpolar driving forces for protein folding and protein binding reactions.
Journal ArticleDOI

Improved Fourier coefficients for maps using phases from partial structures with errors

TL;DR: In this article, a method is given to estimate the parameter σA in these phase probability expressions from the observed and calculated structure factor amplitudes, from which one can estimate the mean coordinate error for the model, and when there are coordinate errors, a new expression for the non-centric Fourier coefficients is required to suppress this model bias.
Journal ArticleDOI

Atomic structure of the ectodomain from HIV-1 gp41

TL;DR: X-ray crystallography determines the structure of the protease-resistant part of a gp41 ectodomain solubilized with a trimeric GCN4 coiled coil in place of the amino-terminal fusion peptide, and suggests a common mechanism for initiating fusion.
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