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Journal ArticleDOI

Dynamical assessment of physiological systems and states using recurrence plot strategies

Charles L. Webber, +1 more
- 01 Feb 1994 - 
- Vol. 76, Iss: 2, pp 965-973
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TLDR
This paper illustrates how recurrence plots can take single physiological measurements, project them into multidimensional space by embedding procedures, and identify time correlations (recurrences) that are not apparent in the one-dimensional time series.
Abstract
Physiological systems are best characterized as complex dynamical processes that are continuously subjected to and updated by nonlinear feedforward and feedback inputs. System outputs usually exhibit wide varieties of behaviors due to dynamical interactions between system components, external noise perturbations, and physiological state changes. Complicated interactions occur at a variety of hierarchial levels and involve a number of interacting variables, many of which are unavailable for experimental measurement. In this paper we illustrate how recurrence plots can take single physiological measurements, project them into multidimensional space by embedding procedures, and identify time correlations (recurrences) that are not apparent in the one-dimensional time series. We extend the original description of recurrence plots by computing an array of specific recurrence variables that quantify the deterministic structure and complexity of the plot. We then demonstrate how physiological states can be assessed by making repeated recurrence plot calculations within a window sliding down any physiological dynamic. Unlike other predominant time series techniques, recurrence plot analyses are not limited by data stationarity and size constraints. Pertinent physiological examples from respiratory and skeletal motor systems illustrate the utility of recurrence plots in the diagnosis of nonlinear systems. The methodology is fully applicable to any rhythmical system, whether it be mechanical, electrical, neural, hormonal, chemical, or even spacial.

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Citations
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Prediction of protein structural classes for low-homology sequences based on predicted secondary structure

TL;DR: The high prediction accuracy achieved by the proposed method is attributed to the design of a comprehensive feature set on the predicted secondary structure sequences, which is capable of characterizing the sequence order information, local interactions of the secondary structural elements, and spacial arrangements of α helices and β strands.
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Cultured neurons coupled to microelectrode arrays: circuit models, simulations and experimental data

TL;DR: The purpose of this paper is to characterize the neuron-microelectrode junction, based on the equivalent electric-circuit approach, so that recording of action potentials can be simulated with a general-purpose circuit simulation program such as HSPICE.
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Extended recurrence plot analysis and its application to erp data

TL;DR: New measures of complexity based on structures of recurrence plots and their application to data from single-trials of the Oddball experiment can identify laminar states therein and offer a new way of analyzing event-related activity on a single-trial basis.
Journal ArticleDOI

Recurrent patterns of atrial depolarization during atrial fibrillation assessed by recurrence plot quantification.

TL;DR: The detection of spatiotemporal recurrent patterns together with the surrogate data results indicate that during AF a certain degree of local organization exists, likely caused by deterministic mechanisms of activation.
Journal ArticleDOI

Multidimensional Recurrence Quantification Analysis (MdRQA) for the Analysis of Multidimensional Time-Series: A Software Implementation in MATLAB and Its Application to Group-Level Data in Joint Action.

TL;DR: Applications of MdRQA are described, as it provides a coherent analysis framework to systematically investigate dynamics at different group levels—from individual dynamics, to dyadic dynamics, up to global group-level of arbitrary size.
References
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Journal ArticleDOI

Measuring the Strangeness of Strange Attractors

TL;DR: In this paper, the correlation exponent v is introduced as a characteristic measure of strange attractors which allows one to distinguish between deterministic chaos and random noise, and algorithms for extracting v from the time series of a single variable are proposed.
Journal ArticleDOI

Recurrence Plots of Dynamical Systems

TL;DR: In this article, a graphical tool for measuring the time constancy of dynamical systems is presented and illustrated with typical examples, and the tool can be used to measure the time complexity of a dynamical system.
Journal ArticleDOI

Embeddings and delays as derived from quantification of recurrence plots

TL;DR: Recurrence plots have been advocated as a useful diagnostic tool for the assessment of dynamical time series by quantifying certain features of these plots which may be helpful in determining embeddings and delays.
Journal ArticleDOI

Fundamental limitations for estimating dimensions and Lyapunov exponents in dynamical systems

TL;DR: In this paper, it was shown that the correlation dimension of the Grassberger-Procaccia algorithm cannot exceed the value 2 log 10N if N is the number of points in the time series, and when this bound is saturated it is thus not legitimate to conclude that low dimensional dynamics is present.
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