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Genomic divergence during speciation: causes and consequences.

Patrik Nosil, +1 more
- 05 Feb 2012 - 
- Vol. 367, Iss: 1587, pp 332-342
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TLDR
This issue draws upon empirical studies in plants and animals, and theoretical work, to review and further document patterns of genomic divergence, and points to how experimental work is now required to move the field from descriptive studies of patterns of divergence towards a predictive framework that tackles the causes and consequences of genome-wide patterns.
Abstract
Speciation is a fundamental process responsible for the diversity of life. Progress has been made in detecting individual ‘speciation genes’ that cause reproductive isolation. In contrast, until recently, less attention has been given to genome-wide patterns of divergence during speciation. Thus, major questions remain concerning how individual speciation genes are arrayed within the genome, and how this affects speciation. This theme issue is dedicated to exploring this genomic perspective of speciation. Given recent sequencing and computational advances that now allow genomic analyses in most organisms, the goal is to help move the field towards a more integrative approach. This issue draws upon empirical studies in plants and animals, and theoretical work, to review and further document patterns of genomic divergence. In turn, these studies begin to disentangle the role that different processes, such as natural selection, gene flow and recombination rate, play in generating observed patterns. These factors are considered in the context of how genomes diverge as speciation unfolds, from beginning to end. The collective results point to how experimental work is now required, in conjunction with theory and sequencing studies, to move the field from descriptive studies of patterns of divergence towards a predictive framework that tackles the causes and consequences of genome-wide patterns.

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Citations
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Journal ArticleDOI

The genomics of speciation-with-gene-flow

TL;DR: A theory predicting four phases of speciation, defined by changes in the relative effectiveness of divergence and genome hitchhiking, is described and future directions are outlined, emphasizing the need to couple next-generation sequencing with selection, transplant, functional genomics, and mapping studies.
Journal ArticleDOI

The genomic landscape of species divergence in Ficedula flycatchers

TL;DR: This study provides a roadmap to the emerging field of speciation genomics by showing that the genomic landscape of species differentiation is highly heterogeneous with approximately 50 ‘divergence islands’ showing up to 50-fold higher sequence divergence than the genomic background.
Journal ArticleDOI

Genome sequencing and population genomics in non-model organisms.

TL;DR: High-throughput sequencing technologies are revolutionizing the life sciences, and the past 12 months have seen a burst of genome sequences from non-model organisms, in each case representing a fundamental source of data of significant importance to biological research.
Journal ArticleDOI

Interpreting the genomic landscape of speciation: a road map for finding barriers to gene flow.

TL;DR: It is argued that the availability of promising technical and analytical methods will shed further light on the important roles that gene flow and divergent selection have in shaping the genomic landscape of speciation and proposes a road map for future speciation research.
Journal ArticleDOI

Genomic islands of divergence in hybridizing Heliconius butterflies identified by large-scale targeted sequencing.

TL;DR: Targeted next-generation sequence capture is used to survey patterns of divergence across these entire regions in divergent geographical races and species of Heliconius, finding major peaks of elevated population differentiation between races across hybrid zones, which indicate regions under strong divergent selection.
References
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Book

Animal species and evolution

Ernst Mayr
Book

On the Origin of Species by Means of Natural Selection, or, The Preservation of Favoured Races in the Struggle for Life

TL;DR: The "Penguin Classics" edition of "On the Origin of Species" as discussed by the authors contains an introduction and notes by William Bynum, and features a cover designed by Damien Hirst.
Journal ArticleDOI

Animal Species and Evolution

Robert F. Inger, +1 more
- 26 Mar 1964 - 
Journal ArticleDOI

Systematics and the Origin of Species

Dillon Ripley, +1 more
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