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Molecular phylogenetics and diagnosis of Anisakis, Pseudoterranova, and Contracaecum from northern Pacific marine mammals.

TLDR
Phylogenetic analysis of LSU sequences revealed strong support for the monophyly of Anisakinae, Contracaecum plus Phocascaris, Pseudoterranova, and Anisakis, which is primarily consistent with previously published phenograms based on multilocus electrophoretic data.
Abstract
Individual specimens of Anisakis, Pseudoterranova, and Contracaecum collected from marine mammals inhabiting northern Pacific waters were used for comparative diagnostic and molecular phylogenetic analyses. Forty-eight new sequences were obtained for this study of 14 Anisakis taxa, 8 Pseudoterranova taxa, 4 Contracaecum taxa, and 4 outgroup species. Partial 28S (LSU) and complete internal transcribed spacer (ITS-1, 5.8S, ITS-2) ribosomal DNA was amplified by the polymerase chain reaction and sequenced. Sequences of ITS indicated that Pseudoterranova specimens from Zalophus californianus (California sea lion), Mirounga angustirostris (northern elephant seal), Phoca vitulina (harbor seal), Enhydra lutris (sea otter), and Eumetopias jubatus (Steller's sea lion) exactly matched P. decipiens s. str., extending the host and geographic range of this species. Anisakis from northern Pacific marine mammals were most closely related to members of the A. simplex species complex. Comparison of Anisakis ITS sequences diagnosed the presence of A. simplex C in 2 M. angustirostris hosts, which is a new host record. Anisakis specimens from Phocoena phocoena (harbor porpoise), Lissodelphis borealis (Pacific rightwhale porpoise), and E. jubatus included 3 ITS sequences that did not match any known species. Contracaecum adults obtained from Z. californianus were most closely related to C. ogmorhini s.l. and C. rudolphii, but ITS sequences of these Contracaecum specimens did not match C. ogmorhini s. str. or C. margolisi. These novel Anisakis and Contracaecum ITS sequences may represent previously uncharacterized species. Phylogenetic analysis of LSU sequences revealed strong support for the monophyly of Anisakinae, Contracaecum plus Phocascaris, Pseudoterranova, and Anisakis. Phylogenetic trees inferred from ITS sequences yielded robustly supported relationships for Pseudoterranova and Anisakis species that are primarily consistent with previously published phenograms based on multilocus electrophoretic data.

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Journal ArticleDOI

Parasitic Anisakid Nematode Isolated from Stranded Fraser’s Dolphin (Lagenodelphis hosei Fraser, 1956) from Central Philippine Waters

TL;DR: In this paper, the authors used morphological and molecular tools to identify anisakid worms from Fraser's dolphins in the waters of the central Philippines using DNA sequences and phylogenetic analysis of both ITS and mtDNA COX2 genes.
Journal ArticleDOI

The morphological and molecular characterization of Baylisascaris devosi Sprent, 1952 (Ascaridoidea, Nematoda), collected from Pine marten (Martes martes) in Iran.

TL;DR: In this paper, B. devosi was identified from a road-killed Pine marten in northern Iran using morphological and molecular approaches, and the molecular characterization was carried out using partial Cox1, LSU rDNA and ITS-rDNA genes.
Journal ArticleDOI

Quantitative Proteomics Comparison of Total Expressed Proteomes of Anisakis simplex Sensu Stricto, A. pegreffii, and Their Hybrid Genotype.

TL;DR: The proposed methodology (proteomics and statistical) solidly characterize a set of proteins that are susceptible to take advantage of the new targeted proteomics, and confirms the validity of the method.

Molecular identification of Anisakid worm third stage larvae isolated from masou salmon Oncorhynchus masou

TL;DR: This is the first report of molecular detection of anisakid worms in salmonid fishes in Korea.
Journal ArticleDOI

First Report of the Parasitic Nematode Pseudoterranova spp. Found in Mediterranean Monk Seal (Monachus monachus) in Greece: Conservation Implications

TL;DR: A parasitic nematode found in the digestive system of a sub-adult Mediterranean monk seal individual, that was found stranded in the area of Pagasitikos Gulf, Greece in 2019, is identified and a clear genetic similarity is revealed between these individuals and Pseudoterranova spp.
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Is it better to add taxa or characters to a difficult phylogenetic problem

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Is It Better to Add Taxa or Characters to a Difficult

TL;DR: In this paper, the effects of adding characters and/or taxa on phylogenetic accuracy were explored using data generated by computer simulation using a four-taxon tree in the "Felsenstein zone/7".
Journal ArticleDOI

Nematodes from some Norwegian marine fishes

TL;DR: More than 260 specimens of fish, belonging to 64 species, have been searched for nematode parasites and 9 species of fish were found to be free of nematodes.
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