Journal ArticleDOI
On the Water−Carbon Interaction for Use in Molecular Dynamics Simulations of Graphite and Carbon Nanotubes
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TLDR
In this paper, a linear relationship between the contact angle and the water monomer binding energy on graphite was established and a new route to calibrate interaction potential parameters was presented, which was obtained by applying a carbon−oxygen Lennard-Jones potential with parameters eCO = 0.392 kJ mol-1 and σCO = 3.19 A.Abstract:
A systematic molecular dynamics study shows that the contact angle of a water droplet on graphite changes significantly as a function of the water−carbon interaction energy. Together with the observation that a linear relationship can be established between the contact angle and the water monomer binding energy on graphite, a new route to calibrate interaction potential parameters is presented. Through a variation of the droplet size in the range from 1000 to 17 500 water molecules, we determine the line tension to be positive and on the order of 2 × 10-10 J/m. To recover a macroscopic contact angle of 86°, a water monomer binding energy of −6.33 kJ mol-1 is required, which is obtained by applying a carbon−oxygen Lennard-Jones potential with the parameters eCO = 0.392 kJ mol-1 and σCO = 3.19 A. For this new water−carbon interaction potential, we present density profiles and hydrogen bond distributions for a water droplet on graphite.read more
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Precise and Ultrafast Molecular Sieving Through Graphene Oxide Membranes
Rakesh Joshi,Paola Carbone,FengChao Wang,Vasyl G. Kravets,Yang Su,Irina V. Grigorieva,HengAn Wu,Andre K. Geim,Rahul R. Nair +8 more
TL;DR: This work investigates permeation through micrometer-thick laminates prepared by means of vacuum filtration of graphene oxide suspensions, which reveal that the GO membrane can attract a high concentration of small ions into the membrane, which may explain the fast ion transport.
Journal ArticleDOI
Graphene as a subnanometre trans-electrode membrane
Slaven Garaj,William A. Hubbard,Alfonso Reina,Jing Kong,Daniel Branton,Jene Andrew Golovchenko +5 more
TL;DR: It is shown that when immersed in an ionic solution, a layer of graphene becomes a new electrochemical structure that is called a trans-electrode, which is an ideal substrate for very high resolution, high throughput nanopore-based single-molecule detectors.
Journal ArticleDOI
Tunable sieving of ions using graphene oxide membranes
Jijo Abraham,K. S. Vasu,Christopher D. Williams,Kalon Gopinadhan,Yang Su,C. T. Cherian,James Dix,Eric Prestat,Sarah J. Haigh,Irina V. Grigorieva,Paola Carbone,Andre K. Geim,Rahul R. Nair +12 more
TL;DR: A simple scalable method is demonstrated to obtain graphene-based membranes with limited swelling, which exhibit 97% rejection for NaCl and decrease exponentially with decreasing sieve size, but water transport is weakly affected.
Journal ArticleDOI
Wetting transparency of graphene
J. Rafiee,Xi Mi,Hemtej Gullapalli,Abhay V. Thomas,Fazel Yavari,Yunfeng Shi,Pulickel M. Ajayan,Nikhil Koratkar +7 more
TL;DR: It is reported that graphene coatings do not significantly disrupt the intrinsic wetting behaviour of surfaces for which surface-water interactions are dominated by van der Waals forces, and contact angle measurements indicate that a graphene monolayer is wetting-transparent to copper, gold or silicon, but not glass, for which the wettability is dominated by short-range chemical bonding.
References
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Journal ArticleDOI
Comparison of simple potential functions for simulating liquid water
TL;DR: In this article, the authors compared the Bernal Fowler (BF), SPC, ST2, TIPS2, TIP3P, and TIP4P potential functions for liquid water in the NPT ensemble at 25°C and 1 atm.
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Computer Simulation of Liquids
Michael P. Allen,D. J. Tildesley +1 more
TL;DR: In this paper, the gear predictor -corrector is used to calculate forces and torques in a non-equilibrium molecular dynamics simulation using Monte Carlo methods. But it is not suitable for the gear prediction problem.
Journal ArticleDOI
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
Bernard R. Brooks,Robert E. Bruccoleri,Barry D. Olafson,David J. States,S. Swaminathan,Martin Karplus +5 more
TL;DR: The CHARMM (Chemistry at Harvard Macromolecular Mechanics) as discussed by the authors is a computer program that uses empirical energy functions to model macromolescular systems, and it can read or model build structures, energy minimize them by first- or second-derivative techniques, perform a normal mode or molecular dynamics simulation, and analyze the structural, equilibrium, and dynamic properties determined in these calculations.
Journal ArticleDOI
A Second Generation Force Field for the Simulation of Proteins, Nucleic Acids, and Organic Molecules
Wendy D. Cornell,Piotr Cieplak,Piotr Cieplak,Christopher I. Bayly,Christopher I. Bayly,Ian R. Gould,Ian R. Gould,Kenneth M. Merz,Kenneth M. Merz,David M. Ferguson,David M. Ferguson,David C. Spellmeyer,David C. Spellmeyer,Thomas R. Fox,James W. Caldwell,Peter A. Kollman +15 more
TL;DR: Weiner et al. as mentioned in this paper derived a new molecular mechanical force field for simulating the structures, conformational energies, and interaction energies of proteins, nucleic acids, and many related organic molecules in condensed phases.
Journal ArticleDOI
Nanotube molecular wires as chemical sensors
Jing Kong,Nathan R. Franklin,Chongwu Zhou,Michael Chapline,Shu Peng,Kyeongjae Cho,Hongjie Dai +6 more
TL;DR: The nanotubes sensors exhibit a fast response and a substantially higher sensitivity than that of existing solid-state sensors at room temperature and the mechanisms of molecular sensing with nanotube molecular wires are investigated.