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Showing papers on "Pelagic zone published in 2014"



Journal ArticleDOI
18 Jun 2014-PLOS ONE
TL;DR: It is highlighted how anthropogenic millimeter-sized polymers have created a new pelagic habitat for microorganisms and invertebrates in Australia-wide coastal and oceanic, tropical to temperate sample collections.
Abstract: Millimeter-sized plastics are abundant in most marine surface waters, and known to carry fouling organisms that potentially play key roles in the fate and ecological impacts of plastic pollution. In this study we used scanning electron microscopy to characterize biodiversity of organisms on the surface of 68 small floating plastics (length range = 1.7–24.3 mm, median = 3.2 mm) from Australia-wide coastal and oceanic, tropical to temperate sample collections. Diatoms were the most diverse group of plastic colonizers, represented by 14 genera. We also recorded ‘epiplastic’ coccolithophores (7 genera), bryozoans, barnacles (Lepas spp.), a dinoflagellate (Ceratium), an isopod (Asellota), a marine worm, marine insect eggs (Halobates sp.), as well as rounded, elongated, and spiral cells putatively identified as bacteria, cyanobacteria, and fungi. Furthermore, we observed a variety of plastic surface microtextures, including pits and grooves conforming to the shape of microorganisms, suggesting that biota may play an important role in plastic degradation. This study highlights how anthropogenic millimeter-sized polymers have created a new pelagic habitat for microorganisms and invertebrates. The ecological ramifications of this phenomenon for marine organism dispersal, ocean productivity, and biotransfer of plastic-associated pollutants, remains to be elucidated.

388 citations


Journal ArticleDOI
TL;DR: It is shown that environmentally realistic exposures to crude oil cause specific dose-dependent defects in cardiac function in all three species, with circulatory disruption culminating in pericardial edema and other secondary malformations.
Abstract: The Deepwater Horizon disaster released more than 636 million L of crude oil into the northern Gulf of Mexico. The spill oiled upper surface water spawning habitats for many commercially and ecologically important pelagic fish species. Consequently, the developing spawn (embryos and larvae) of tunas, swordfish, and other large predators were potentially exposed to crude oil-derived polycyclic aromatic hydrocarbons (PAHs). Fish embryos are generally very sensitive to PAH-induced cardiotoxicity, and adverse changes in heart physiology and morphology can cause both acute and delayed mortality. Cardiac function is particularly important for fast-swimming pelagic predators with high aerobic demand. Offspring for these species develop rapidly at relatively high temperatures, and their vulnerability to crude oil toxicity is unknown. We assessed the impacts of field-collected Deepwater Horizon (MC252) oil samples on embryos of three pelagic fish: bluefin tuna, yellowfin tuna, and an amberjack. We show that environmentally realistic exposures (1–15 µg/L total PAH) cause specific dose-dependent defects in cardiac function in all three species, with circulatory disruption culminating in pericardial edema and other secondary malformations. Each species displayed an irregular atrial arrhythmia following oil exposure, indicating a highly conserved response to oil toxicity. A considerable portion of Gulf water samples collected during the spill had PAH concentrations exceeding toxicity thresholds observed here, indicating the potential for losses of pelagic fish larvae. Vulnerability assessments in other ocean habitats, including the Arctic, should focus on the developing heart of resident fish species as an exceptionally sensitive and consistent indicator of crude oil impacts.

386 citations


Journal ArticleDOI
TL;DR: Different species of fish showed inter-specific variation of metals, as well as variations between fish from the same species, which contributed to the contribution of potential factors that affected metals' uptake, like age, geographical distribution and species' specific factors.
Abstract: The concentrations of heavy metals (Cu, Zn, Pb, Cd, Fe and Mn) were measured in the liver, gills and muscles of fourteen benthic and pelagic fish species collected from three main landing areas (Shalateen, Hurghada and Suez) in the Egyptian Red Sea. The levels of heavy metals varied significantly among fish species and organs. As expected, muscles always possessed the lowest concentrations of all metals. In most studied fish, the liver was the target organ for Cu, Zn and Fe accumulation. Pb and Mn, however, exhibited their highest concentrations in the gills. Different species of fish showed inter-specific variation of metals, as well as variations between fish from the same species. These differences were discussed for the contribution of potential factors that affected metals' uptake, like age, geographical distribution and species' specific factors. Generally, recorded metal concentrations were within the range or below the levels in similar species from global studies. The concentration of metals in the present fish muscles were accepted by the international legislation limits and are safe for human consumption.

356 citations


Journal ArticleDOI
TL;DR: This work reviews the processes that contribute to coastal acidification with attention to timescales of variability and habitats relevant to marine bivalves.
Abstract: Multiple natural and anthropogenic processes alter the carbonate chemistry of the coastal zone in ways that either exacerbate or mitigate ocean acidification effects. Freshwater inputs and multiple acid-base reactions change carbonate chemistry conditions, sometimes synergistically. The shallow nature of these systems results in strong benthic-pelagic coupling, and marine invertebrates at different life history stages rely on both benthic and pelagic habitats. Carbonate chemistry in coastal systems can be highly variable, responding to processes with temporal modes ranging from seconds to centuries. Identifying scales of variability relevant to levels of biological organization requires a fuller characterization of both the frequency and magnitude domains of processes contributing to or reducing acidification in pelagic and benthic habitats. We review the processes that contribute to coastal acidification with attention to timescales of variability and habitats relevant to marine bivalves.

325 citations


Journal ArticleDOI
TL;DR: It is found that oil and gas platforms off the coast of California have the highest secondary fish production per unit area of seafloor of any marine habitat that has been studied, about an order of magnitude higher than fish communities from other marine ecosystems.
Abstract: Secondary (i.e., heterotrophic or animal) production is a main pathway of energy flow through an ecosystem as it makes energy available to consumers, including humans. Its estimation can play a valuable role in the examination of linkages between ecosystem functions and services. We found that oil and gas platforms off the coast of California have the highest secondary fish production per unit area of seafloor of any marine habitat that has been studied, about an order of magnitude higher than fish communities from other marine ecosystems. Most previous estimates have come from estuarine environments, generally regarded as one of the most productive ecosystems globally. High rates of fish production on these platforms ultimately result from high levels of recruitment and the subsequent growth of primarily rockfish (genus Sebastes) larvae and pelagic juveniles to the substantial amount of complex hardscape habitat created by the platform structure distributed throughout the water column. The platforms have a high ratio of structural surface area to seafloor surface area, resulting in large amounts of habitat for juvenile and adult demersal fishes over a relatively small footprint of seafloor. Understanding the biological implications of these structures will inform policy related to the decommissioning of existing (e.g., oil and gas platforms) and implementation of emerging (e.g., wind, marine hydrokinetic) energy technologies.

170 citations


Journal ArticleDOI
TL;DR: It is shown that tropical vagrant species are more likely to originate from high-latitude populations, while at the demographic level, tropical fish species with large body size, high swimming ability, large size at settlement and pelagic spawning behaviour areMore likely to show successful settlement into temperate habitats.
Abstract: Climate change is resulting in rapid poleward shifts in the geographical distribution of many tropical fish species, but it is equally apparent that some fishes are failing to exhibit expected shifts in their geographical distribution. There is still little understanding of the species-specific traits that may constrain or promote successful establishment of populations in temperate regions. We review the factors likely to affect population establishment, including larval supply, settlement and post-settlement processes. In addition, we conduct meta-analyses on existing and new data to examine relationships between species-specific traits and vagrancy. We show that tropical vagrant species are more likely to originate from high-latitude populations, while at the demographic level, tropical fish species with large body size, high swimming ability, large size at settlement and pelagic spawning behaviour are more likely to show successful settlement into temperate habitats. We also show that both habitat and food limitation at settlement and within juvenile stages may constrain tropical vagrant communities to those species with medium to low reliance on coral resources.

153 citations


Journal ArticleDOI
TL;DR: It is shown that oceanic-stage turtles rarely travel in Continental Shelf waters, frequently depart the currents associated with the North Atlantic Subtropical Gyre, and travel quickly when in Gyre currents, and select sea surface habitats that are likely to provide a thermal benefit or refuge to young sea turtles, supporting growth, foraging and survival.
Abstract: Few at-sea behavioural data exist for oceanic-stage neonate sea turtles, a life-stage commonly referred to as the sea turtle ‘lost years’. Historically, the long-term tracking of small, fast-growing organisms in the open ocean was logistically or technologically impossible. Here, we provide the first long-term satellite tracks of neonate sea turtles. Loggerheads (Caretta caretta) were remotely tracked in the Atlantic Ocean using small solar-powered satellite transmitters. We show that oceanic-stage turtles (i) rarely travel in Continental Shelf waters, (ii) frequently depart the currents associated with the North Atlantic Subtropical Gyre, (iii) travel quickly when in Gyre currents, and (iv) select sea surface habitats that are likely to provide a thermal benefit or refuge to young sea turtles, supporting growth, foraging and survival. Our satellite tracks help define Atlantic loggerhead nursery grounds and early loggerhead habitat use, allowing us to re-examine sea turtle ‘lost years’ paradigms.

140 citations


Journal ArticleDOI
TL;DR: It is shown that decadal-to-century scale changes in carbon export associated with climate change lead to an estimated 5.2% decrease in future (2091–2100) global open ocean benthic biomass under RCP8.5 (reduction of 5.1 Mt C) compared with contemporary conditions.
Abstract: Seafloor organisms are vital for healthy marine ecosystems, contributing to elemental cycling, benthic remineralization, and ultimately sequestration of carbon. Deep-sea life is primarily reliant on the export flux of particulate organic carbon from the surface ocean for food, but most ocean biogeochemistry models predict global decreases in export flux resulting from 21st century anthropogenically induced warming. Here we show that decadal-to-century scale changes in carbon export associated with climate change lead to an estimated 5.2% decrease in future (2091–2100) global open ocean benthic biomass under RCP8.5 (reduction of 5.2 Mt C) compared with contemporary conditions (2006–2015). Our projections use multi-model mean export flux estimates from eight fully coupled earth system models, which contributed to the Coupled Model Intercomparison Project Phase 5, that have been forced by high and low representative concentration pathways (RCP8.5 and 4.5, respectively). These export flux estimates are used in conjunction with published empirical relationships to predict changes in benthic biomass. The polar oceans and some upwelling areas may experience increases in benthic biomass, but most other regions show decreases, with up to 38% reductions in parts of the northeast Atlantic. Our analysis projects a future ocean with smaller sized infaunal benthos, potentially reducing energy transfer rates though benthic multicellular food webs. More than 80% of potential deep-water biodiversity hotspots known around the world, including canyons, seamounts, and cold-water coral reefs, are projected to experience negative changes in biomass. These major reductions in biomass may lead to widespread change in benthic ecosystems and the functions and services they provide.

132 citations


Journal ArticleDOI
TL;DR: It is postulate that E. huxleyi may be more sensitive to recent environmental changes than to changing ocean carbonate chemistry, partly because increased availability of CO2(aq) likely alleviates a carbon limitation for the inefficient Rubisco enzyme in these algae.
Abstract: Coccolithophores are one of the most abundant eukaryotic phytoplankton in the oceans and are distinguished by their ability to build calcitic platelets (coccoliths). Of the numerous species, Emiliania huxleyi is considered one of the major calcifiers in the pelagic ocean. There is growing concern that increasing levels of CO2 in the atmosphere and the subsequent acidification of the ocean may disrupt the production of coccoliths. Furthermore, any change in the global distribution and abundance of E. huxleyi relative to non-calcifying groups of phytoplankton (e. g. diatoms) will have important effects on the biogeochemical cycling of carbon and climatic feedbacks. We review different lines of evidence that suggest E. huxleyi is increasingly expanding its range into the polar oceans. These observations contribute to the debate on the climatic effects on natural coccolithophore populations. We postulate that E. huxleyi may be more sensitive to recent environmental changes such as increasing sea surface temperature and salinity than to changing ocean carbonate chemistry, partly because increased availability of CO2(aq) likely alleviates a carbon limitation for the inefficient Rubisco enzyme in these algae. Any potentially important climatic feedbacks of coccolithophores need a better knowledge of the mechanisms and rates of adaptation by natural populations. As more data and modelling work become available, the real significance of this poleward expansion will become clear.

116 citations


Journal ArticleDOI
TL;DR: The deployment of pop-up satellite archival transmitting tags on 15 Chilean devil rays in the central North Atlantic Ocean provides evidence of an important link between predators in the surface ocean and forage species occupying pelagic habitats below the euphotic zone in ocean ecosystems.
Abstract: Many pelagic fishes and squids live at ocean depths below the euphotic zone but whether surface predators dive to these depths to feed on them is unclear. Here, the authors tag Chilean devil rays and demonstrate that they regularly make dives to at least 1,500 m, suggesting that the rays forage for food at these depths.

Journal ArticleDOI
18 Feb 2014-PLOS ONE
TL;DR: The results across a broad gradient of sites demonstrate that the pathways of MeHg to lower trophic level estuarine organisms are distinctly different between benthic deposit feeders and forage fish, suggesting that even in systems with contaminated sediments, transfer of Mehg into estuarist food webs maybe driven more by the efficiency of processes that determine MeHG input and bioavailability in the water column.
Abstract: Methylmercury (MeHg) is a contaminant of global concern that bioaccumulates and bioamagnifies in marine food webs. Lower trophic level fauna are important conduits of MeHg from sediment and water to estuarine and coastal fish harvested for human consumption. However, the sources and pathways of MeHg to these coastal fisheries are poorly known particularly the potential for transfer of MeHg from the sediment to biotic compartments. Across a broad gradient of human land impacts, we analyzed MeHg concentrations in food webs at ten estuarine sites in the Northeast US (from the Hackensack Meadowlands, NJ to the Gulf of Maine). MeHg concentrations in water column particulate material, but not in sediments, were predictive of MeHg concentrations in fish (killifish and Atlantic silversides). Moreover, MeHg concentrations were higher in pelagic fauna than in benthic-feeding fauna suggesting that MeHg delivery to the water column from methylation sites from within or outside of the estuary may be an important driver of MeHg bioaccumulation in estuarine pelagic food webs. In contrast, bulk sediment MeHg concentrations were only predictive of concentrations of MeHg in the infaunal worms. Our results across a broad gradient of sites demonstrate that the pathways of MeHg to lower trophic level estuarine organisms are distinctly different between benthic deposit feeders and forage fish. Thus, even in systems with contaminated sediments, transfer of MeHg into estuarine food webs maybe driven more by the efficiency of processes that determine MeHg input and bioavailability in the water column.

Journal ArticleDOI
TL;DR: This paper reviews the current knowledge on the ecology of widely distributed pelagic fish stocks in the North Atlantic basin with emphasis on their role in the food web and the factors determining their relationship with the environment, and identifies knowledge gaps and modelling needs that the EURO-BASIN project attempts to address.

Journal ArticleDOI
TL;DR: It is shown that excess NH4+ delivery from the benthic system during the A. marina and M. viridis expansion period enriched the overlying water in DIN and stimulated phytoplankton concentration, in support of the second hypothesis that changes in species functional traits affect biogeochemical cycling with cascading effects on ecological functioning.
Abstract: We identify how ecosystem functioning in shallow estuaries is affected by shifts in benthic fauna communities. We use the shallow estuary, Odense Fjord, Denmark, as a case study to test our hypotheses that (1) shifts in benthic fauna composition and species functional traits affect biogeochemical cycling with cascading effects on ecological functioning, which may (2) modulate pelagic primary productivity with feedbacks to the benthic system. Odense Fjord is suitable because it experienced dramatic shifts in benthic fauna community structure from 1998 to 2008. We focused on infaunal species with emphasis on three dominating burrow-dwelling polychaetes: the native Nereis (Hediste) diversicolor and Arenicola marina, and the invasive Marenzelleria viridis. The impact of functional traits in the form of particle reworking and ventilation on biogeochemical cycles, i.e. sediment metabolism and nutrient dynamics, was determined from literature data. Historical records of summer nutrient levels in the water column of the inner Odense Fjord show elevated concentrations of NH4+ and NO3- (DIN) during the years 2004-2006, exactly when the N. diversicolor population declined and A. marina and M. viridis populations expanded dramatically. In support of our first hypothesis, we show that excess NH4+ delivery from the benthic system during the A. marina and M. viridis expansion period enriched the overlying water in DIN and stimulated phytoplankton concentration. The altered benthic-pelagic coupling and stimulated pelagic production may, in support of our second hypothesis, have feedback to the benthic system by changing the deposition of organic material. We therefore advice to identify the exact functional traits of the species involved in a community shift before studying its impact on ecosystem functioning. We also suggest studying benthic community shifts in shallow environments to obtain knowledge about the drivers and controls before exploring deep-water environments.

Journal ArticleDOI
TL;DR: The population genetic patterns of an anemonefish, Amphiprion bicinctus, along the Saudi Arabian coast of the Red Sea are investigated, highlighting the potential key role of environmental patchiness in shaping patterns of gene flow in species with pelagic larval dispersal.
Abstract: The relatively recent fields of terrestrial landscape and marine seascape genetics seek to identify the influence of biophysical habitat features on the spatial genetic structure of populations or individuals. Over the last few years, there has been accumulating evidence for the effect of environmental heterogeneity on patterns of gene flow and connectivity in marine systems. Here, we investigate the population genetic patterns of an anemonefish, Amphiprion bicinctus, along the Saudi Arabian coast of the Red Sea. We collected nearly one thousand samples from 19 locations, spanning approximately 1500 km, and genotyped them at 38 microsatellite loci. Patterns of gene flow appeared to follow a stepping-stone model along the northern and central Red Sea, which was disrupted by a distinct genetic break at a latitude of approximately 19°N. The Red Sea is characterized by pronounced environmental gradients along its axis, roughly separating the northern and central from the southern basin. Using mean chlorophyll-a concentrations as a proxy for this gradient, we ran tests of isolation by distance (IBD, R(2) = 0.52) and isolation by environment (IBE, R(2) = 0.64), as well as combined models using partial Mantel tests and multiple matrix regression with randomization (MMRR). We found that genetic structure across our sampling sites may be best explained by a combined model of IBD and IBE (Mantel: R(2) = 0.71, MMRR: R(2) = 0.86). Our results highlight the potential key role of environmental patchiness in shaping patterns of gene flow in species with pelagic larval dispersal. We support growing calls for the integration of biophysical habitat characteristics into future studies of population genetic structure.

Journal ArticleDOI
04 Feb 2014-PLOS ONE
TL;DR: It is found that a regime shift and ocean climate, acting via food availability, have discernible impacts on the regulation of this population of capelin and are important for the development of ecosystem approaches to fisheries management and raise questions on the potential impacts of climate change on the structure and productivity of this marine ecosystem.
Abstract: The Northwest Atlantic marine ecosystem off Newfoundland and Labrador, Canada, has been commercially exploited for centuries. Although periodic declines in various important commercial fish stocks have been observed in this ecosystem, the most drastic changes took place in the early 1990s when the ecosystem structure changed abruptly and has not returned to its previous configuration. In the Northwest Atlantic, food web dynamics are determined largely by capelin (Mallotus villosus), the focal forage species which links primary and secondary producers with the higher trophic levels. Notwithstanding the importance of capelin, the factors that influence its population dynamics have remained elusive. We found that a regime shift and ocean climate, acting via food availability, have discernible impacts on the regulation of this population. Capelin biomass and timing of spawning were well explained by a regime shift and seasonal sea ice dynamics, a key determinant of the pelagic spring bloom. Our findings are important for the development of ecosystem approaches to fisheries management and raise questions on the potential impacts of climate change on the structure and productivity of this marine ecosystem.

Journal ArticleDOI
01 May 2014-Ecology
TL;DR: Lake Michigan fishes and invertebrates appear to have responded to dreissenid-induced changes in nutrient and energy pathways by switching from pelagic to alternative nearshore energy subsidies, suggesting changes in trophic structure and utilization of novel energy pathways may help to stabilize food webs following species invasions.
Abstract: Aquatic food webs that incorporate multiple energy channels (e.g., nearshore benthic and pelagic) with varying productivity and turnover rates convey stability to biological communities by providing independent energy sources. Within the Lake Michigan food web, invasive dreissenid mussels have caused rapid changes to food web structure and potentially altered the channels through which consumers acquire energy. We used stable C and N isotopes to determine how Lake Michigan food web structure has changed in the past decade, coincident with the expansion of dreissenid mussels, decreased pelagic phytoplankton production, and increased nearshore benthic algal production. Fish and invertebrate samples collected from sites around Lake Michigan were analyzed to determine taxa-specific 13C:12C (δ13C) and 15N:14N (δ15N) ratios. Sampling took place during two distinct periods, 2002–2003 and 2010–2012, that spanned the period of dreissenid expansion, and included nearshore, pelagic and profundal fish and invertebrat...

Journal ArticleDOI
TL;DR: In this paper, the authors review the scientific underpinnings of pelagic MPA effects, spatio-temporal patterns of Indian Ocean tuna catch, bycatch and fish movements, and the consequences of these for the efficacy of spatial management for Indian Ocean tropical tuna fisheries.
Abstract: Effective use of spatial management in the pelagic realm presents special challenges due to high fish and fisher mobility, limited knowledge and significant governance challenges. The tropical Indian Ocean provides an ideal case study for testing our ability to apply existing data sources to assessing impacts of spatial management on tuna fisheries because of several recent controversial spatial closures. We review the scientific underpinnings of pelagic MPA effects, spatio-temporal patterns of Indian Ocean tuna catch, bycatch and fish movements, and the consequences of these for the efficacy of spatial management for Indian Ocean tropical tuna fisheries. The tropical Indian Ocean is characterized by strong environmental fluctuations, regular seasonal variability in catch, large observed tuna displacement distances, relatively uniform catch-per-unit-effort and bycatch rates over space, and high fisher mobility, all of which suggest significant variability and movement in tropical tuna fisheries that are simply not well adapted to static spatial closures. One possible exception to this overall conclusion would be a large time/area closure east of Somalia. If closed for a significant fraction of the year it could reduce purse-seine bycatch and juvenile tuna catch. Dynamic closures following fish migratory patterns are possible, but more focused information on fish movements will be needed for effective implementation. Fortunately, several recent improvements in conventional fishery management and reporting will likely enhance our ability to evaluate spatial and non-spatial management options in the near future, particularly as pertaining to bycatch species.

Journal ArticleDOI
TL;DR: In this article, the authors describe recent trends in phytoplankton composition and abundance in the Laurentian Great Lakes using synoptic spring and summer sampling events from 2001 through 2011, a period of rapid shifts in pelagic food webs and water quality.

Journal ArticleDOI
06 Nov 2014-PLOS ONE
TL;DR: An innovative method to investigate species collocation at different scales revealed that globally the three species strongly overlap, and species often co-occurred in terms of presence/absence, their biomass density differed at local scale, suggesting potential interspecific avoidance or different sensitivity to local environmental characteristics.
Abstract: Understanding the ecological and anthropogenic drivers of population dynamics requires detailed studies on habitat selection and spatial distribution. Although small pelagic fish aggregate in large shoals and usually exhibit important spatial structure, their dynamics in time and space remain unpredictable and challenging. In the Gulf of Lions (north-western Mediterranean), sardine and anchovy biomasses have declined over the past 5 years causing an important fishery crisis while sprat abundance rose. Applying geostatistical tools on scientific acoustic surveys conducted in the Gulf of Lions, we investigated anchovy, sardine and sprat spatial distributions and structures over 10 years. Our results show that sardines and sprats were more coastal than anchovies. The spatial structure of the three species was fairly stable over time according to variogram outputs, while year-to-year variations in kriged maps highlighted substantial changes in their location. Support for the McCall's basin hypothesis (covariation of both population density and presence area with biomass) was found only in sprats, the most variable of the three species. An innovative method to investigate species collocation at different scales revealed that globally the three species strongly overlap. Although species often co-occurred in terms of presence/absence, their biomass density differed at local scale, suggesting potential interspecific avoidance or different sensitivity to local environmental characteristics. Persistent favourable areas were finally detected, but their environmental characteristics remain to be determined.

Journal ArticleDOI
TL;DR: In this article, stable isotope analyses of 13 major fish taxa were performed in Lake Superior of the Laurentian Great Lakes and the results indicated that the overall importance of benthic food-web pathways to fish was highest in nearshore species, whereas the importance of planktonic pathways increased in offshore species.
Abstract: SUMMARY 1. In large lakes around the world, depth-based changes in the abundance and distribution of invertebrate and fish species suggest that there may be concomitant changes in patterns of resource allocation. Using Lake Superior of the Laurentian Great Lakes as an example, we explored this idea through stable isotope analyses of 13 major fish taxa. 2. Patterns in carbon and nitrogen isotope ratios revealed use of both littoral and profundal benthos among populations of most taxa analysed regardless of the depth of their habitat, providing evidence of nearshore–offshore trophic linkages in the largest freshwater lake by area in the world. 3. Isotope-mixing model results indicated that the overall importance of benthic food-web pathways to fish was highest in nearshore species, whereas the importance of planktonic pathways increased in offshore species. These characteristics, shared with the Great Lakes of Africa, Russia and Japan, appear to be governed by two key processes: high benthic production in nearshore waters and the prevalence of diel vertical migration (DVM) among offshore invertebrate and fish taxa. DVM facilitates use of pelagic food resources by deep-water biota and represents an important process of trophic linkage among habitats in large lakes. 4. Support of whole-lake food webs through trophic linkages among pelagic, profundal and littoral habitats appears to be integral to the functioning of large lakes. These linkages can be disrupted though ecosystem disturbance such as eutrophication or the effects of invasive species and should be considered in native species restoration efforts.

Journal ArticleDOI
07 May 2014-PLOS ONE
TL;DR: It is postulate that these food-falls are the result of a local concentration of large marine vertebrates, linked to the high surface primary productivity in the study area.
Abstract: The carcasses of large pelagic vertebrates that sink to the seafloor represent a bounty of food to the deep-sea benthos, but natural food-falls have been rarely observed. Here were report on the first observations of three large ‘fish-falls’ on the deep-sea floor: a whale shark (Rhincodon typus) and three mobulid rays (genus Mobula). These observations come from industrial remotely operated vehicle video surveys of the seafloor on the Angola continental margin. The carcasses supported moderate communities of scavenging fish (up to 50 individuals per carcass), mostly from the family Zoarcidae, which appeared to be resident on or around the remains. Based on a global dataset of scavenging rates, we estimate that the elasmobranch carcasses provided food for mobile scavengers over extended time periods from weeks to months. No evidence of whale-fall type communities was observed on or around the carcasses, with the exception of putative sulphide-oxidising bacterial mats that outlined one of the mobulid carcasses. Using best estimates of carcass mass, we calculate that the carcasses reported here represent an average supply of carbon to the local seafloor of 0.4 mg m−2d−1, equivalent to ∼4% of the normal particulate organic carbon flux. Rapid flux of high-quality labile organic carbon in fish carcasses increases the transfer efficiency of the biological pump of carbon from the surface oceans to the deep sea. We postulate that these food-falls are the result of a local concentration of large marine vertebrates, linked to the high surface primary productivity in the study area.

Journal ArticleDOI
TL;DR: It is suggested that new production of Sargassum occurs in neritic waters of the western North Atlantic Ocean and Gulf of Mexico, where mutualistic relationships with fishes, especially juvenile filefishes and carangids, contribute to nutrient supply and growth.

Journal ArticleDOI
TL;DR: In shallow aquatic systems, benthic and pelagic primary producers typically compete for light and nutrients along opposing vertical supply axes: pelagic algae shade the benthics habitat; conversely, ...
Abstract: In shallow aquatic systems, benthic and pelagic primary producers typically compete for light and nutrients along opposing vertical supply axes: pelagic algae shade the benthic habitat; conversely, ...

Journal ArticleDOI
TL;DR: The model suggested that high self-seeding rates for reef fish are possible, even in areas where the ‘sticky water’ effect is minimal and in the absence of long-term trapping in oceanic fronts and/or large-scale oceanic eddies or filaments that are often argued to facilitate the return of the larvae after long periods of drifting at sea.
Abstract: A predictive model of the fate of coral reef fish larvae in a reef system is proposed that combines the oceanographic processes of advection and turbulent diffusion with the biological process of horizontal swimming controlled by olfactory and auditory cues within the timescales of larval development. In the model, auditory cues resulted in swimming towards the reefs when within hearing distance of the reef, whereas olfactory cues resulted in the larvae swimming towards the natal reef in open waters by swimming against the concentration gradients in the smell plume emanating from the natal reef. The model suggested that the self-seeding rate may be quite large, at least 20% for the larvae of rapidly developing reef fish species, which contrasted with a self-seeding rate less than 2% for non-swimming coral larvae. The predicted self-recruitment rate of reefs was sensitive to a number of parameters, such as the time at which the fish larvae reach post-flexion, the pelagic larval duration of the larvae, the horizontal turbulent diffusion coefficient in reefal waters and the horizontal swimming behaviour of the fish larvae in response to auditory and olfactory cues, for which better field data are needed. Thus, the model suggested that high self-seeding rates for reef fish are possible, even in areas where the ‘sticky water’ effect is minimal and in the absence of long-term trapping in oceanic fronts and/or large-scale oceanic eddies or filaments that are often argued to facilitate the return of the larvae after long periods of drifting at sea.

Journal ArticleDOI
TL;DR: In this paper, the authors used a pelagic stereo-Baited Remote Underwater Video system (BRUVs) as a non-destructive, fishery-independent approach to study pelagic fish assemblages.

Journal ArticleDOI
TL;DR: This analysis suggests that Humboldt squid are indirectly affected by OMZ shoaling through effects on a primary food source, myctophid fishes, and suggests that this indirect linkage between hypoxia and foraging is an important driver of the ongoing range expansion of Humboldingt squid in the northeastern Pacific Ocean.
Abstract: Climate-driven range shifts are ongoing in pelagic marine environments, and ecosystems must respond to combined effects of altered species distributions and environmental drivers. Hypoxic oxygen minimum zones (OMZs) in midwater environments are shoaling globally; this can affect distributions of species both geographically and vertically along with predator–prey dynamics. Humboldt (jumbo) squid (Dosidicus gigas) are highly migratory predators adapted to hypoxic conditions that may be deleterious to their competitors and predators. Consequently, OMZ shoaling may preferentially facilitate foraging opportunities for Humboldt squid. With two separate modeling approaches using unique, long-term data based on in situ observations of predator, prey, and environmental variables, our analyses suggest that Humboldt squid are indirectly affected by OMZ shoaling through effects on a primary food source, myctophid fishes. Our results suggest that this indirect linkage between hypoxia and foraging is an important driver of the ongoing range expansion of Humboldt squid in the northeastern Pacific Ocean.

Journal ArticleDOI
TL;DR: This work compared the catch composition, relative abundance and length distribution of fish assemblages sampled using pelagic stereo-BRUVs and conventional scientific longline surveys and focused on sharks of the family Carcharhinidae to assess the sampling effectiveness of this novel technique along a latitudinal gradient off the coast of Western Australia.
Abstract: Summary Our understanding of the ecology of sharks and other highly mobile marine species often relies on fishery-dependent data or extractive fishery-independent techniques that can result in catchability and size-selectivity biases. Pelagic Baited Remote Underwater stereo-Video Systems (pelagic stereo-BRUVs) provide a standardized, non-destructive and fishery-independent approach to estimate biodiversity measures of fish assemblages in the water column. However, the performance of this novel method has not yet been assessed relative to other standard sampling techniques. We compared the catch composition, relative abundance and length distribution of fish assemblages sampled using pelagic stereo-BRUVs and conventional scientific longline surveys. In particular, we focused on sharks of the family Carcharhinidae (requiem sharks) to assess the sampling effectiveness of this novel technique along a latitudinal gradient off the coast of Western Australia. We calibrated the sampling effort required for each technique to obtain equivalent samples of the target species and discuss the advantages, limitations and potential use of these methods to study highly mobile species. The proportion of sharks sampled by pelagic stereo-BRUVs and scientific longline surveys was comparable across the latitudinal gradient. Carcharhinus plumbeus was the most abundant species sampled by both the techniques. Longline surveys selected larger individuals of the family Carcharhinidae in comparison with the length distribution data obtained from pelagic stereo-BRUVs. However, the relative abundance estimates (catch per unit of effort) from the pelagic stereo-BRUVs were comparable to those from 5 to 30 longline hooks. Pelagic stereo-BRUVs can be calibrated to standard techniques in order to study the species composition, behaviour, relative abundance and size distribution of highly mobile fish assemblages at broad spatial and temporal scales. This technique offers a non-destructive fishery-independent approach that can be implemented in areas that may be closed to fishing and is suitable for studies on rare or threatened species.

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TL;DR: A mass balance food web model for the eastern Chukchi Sea was developed and it was found that density estimates of most fish groups derived from trawl survey data were insufficient to match the consumptive demands of predators, and that densities needed to be several-fold greater to meet modeled demand.
Abstract: The Chukchi Sea is a seasonally ice-covered, marginal Arctic-shelf sea that possesses both large petroleum reserves and abundant biological communities, including migratory mammals and seabirds. We developed a mass balance food web model for the eastern Chukchi Sea to evaluate the trophic structure of this ecosystem and to compare food web properties of the Chukchi Sea to those of other high-latitude marine ecosystems. We compiled data on biomass levels, diet composition, demographic rates (production, consumption), and fishery removals, and used these data to construct an Ecopath trophic mass balance model. The majority of biomass was concentrated in benthic invertebrates and most of the mass flow above trophic level 2.0 was through these groups. We found that density estimates of most fish groups derived from trawl survey data using area-swept methods were insufficient to match the consumptive demands of predators, and that densities needed to be several-fold greater to meet modeled demand. We also used a set of system metrics derived from a common modeling framework to highlight differences in ecosystem structure between the eastern Chukchi Sea and other high-latitude systems. The extent of benthic dominance observed in the eastern Chukchi Sea was unique among the systems examined, both in terms of food web structure and associated mass flows between benthic and pelagic components. In relation to total biomass density, the eastern Chukchi Sea had low production when compared with the other systems, and this lower turnover rate suggests that recovery from disturbance might be slow.

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TL;DR: It is concluded that the simultaneous use of two bird-scaring lines, weighted branch lines and night setting meet the criteria for best-practice seabird bycatch mitigation for the joint-venture fleet targeting tuna and related species in the South African EEZ.