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Bernd Rinn
Researcher at ETH Zurich
Publications - 28
Citations - 2086
Bernd Rinn is an academic researcher from ETH Zurich. The author has contributed to research in topics: Brownian dynamics & Data management. The author has an hindex of 16, co-authored 28 publications receiving 1828 citations. Previous affiliations of Bernd Rinn include University of Konstanz & École Polytechnique Fédérale de Lausanne.
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Journal ArticleDOI
Condition-Dependent Transcriptome Reveals High-Level Regulatory Architecture in Bacillus subtilis
Pierre Nicolas,Ulrike Mäder,Etienne Dervyn,Tatiana Rochat,Aurélie Leduc,Nathalie Pigeonneau,Elena Bidnenko,Elodie Marchadier,Mark Hoebeke,Stéphane Aymerich,Dörte Becher,Paola Bisicchia,Eric Botella,Olivier Delumeau,Geoff Doherty,Emma L. Denham,Mark J. Fogg,Vincent Fromion,Anne Goelzer,Annette Hansen,Elisabeth Härtig,Colin R. Harwood,Georg Homuth,Hanne Østergaard Jarmer,Matthieu Jules,Edda Klipp,Ludovic Le Chat,François Lecointe,Peter J. Lewis,Wolfram Liebermeister,Anika March,Ruben A. T. Mars,Priyanka Nannapaneni,David Noone,Susanne Pohl,Bernd Rinn,Frank Rügheimer,Praveen K. Sappa,Franck Samson,Marc Schaffer,Benno Schwikowski,Leif Steil,Jörg Stülke,Thomas Wiegert,Kevin M. Devine,Anthony J. Wilkinson,Jan Maarten van Dijl,Michael Hecker,Uwe Völker,Philippe Bessières,Philippe Noirot +50 more
TL;DR: The transcriptomes of Bacillus subtilis exposed to a wide range of environmental and nutritional conditions that the organism might encounter in nature are reported, offering an initial understanding of why certain regulatory strategies may be favored during evolution of dynamic control systems.
Journal ArticleDOI
Global Network Reorganization During Dynamic Adaptations of Bacillus subtilis Metabolism
Joerg Martin Buescher,Wolfram Liebermeister,Matthieu Jules,Markus Uhr,Jan Muntel,Eric Botella,Bernd Hessling,Roelco J. Kleijn,Ludovic Le Chat,François Lecointe,Ulrike Mäder,Pierre Nicolas,Sjouke Piersma,Frank Rügheimer,Dörte Becher,Philippe Bessières,Elena Bidnenko,Emma L. Denham,Etienne Dervyn,Kevin M. Devine,Geoff Doherty,Samuel Drulhe,Liza Felicori,Mark J. Fogg,Anne Goelzer,Annette Hansen,Colin R. Harwood,Michael Hecker,Sebastian Hubner,Claus Hultschig,Hanne Østergaard Jarmer,Edda Klipp,Aurélie Leduc,Peter J. Lewis,F. Molina,Philippe Noirot,Sabine Peres,Nathalie Pigeonneau,Susanne Pohl,Simon Rasmussen,Bernd Rinn,Marc Schaffer,Julian Schnidder,Benno Schwikowski,Jan Maarten van Dijl,Patrick Veiga,Sean Walsh,Anthony J. Wilkinson,Jörg Stelling,Stéphane Aymerich,Uwe Sauer +50 more
TL;DR: The responses of a bacterium to changing nutritional conditions are explored and an initial understanding of why certain regulatory strategies may be favored during evolution of dynamic control systems is offered.
Journal ArticleDOI
Probing the Reproducibility of Leaf Growth and Molecular Phenotypes: A Comparison of Three Arabidopsis Accessions Cultivated in Ten Laboratories
Catherine Massonnet,Denis Vile,Juliette Fabre,Matthew A. Hannah,Camila Caldana,Jan Lisec,Gerrit T.S. Beemster,Rhonda C. Meyer,Gaëlle Messerli,Jesper T. Gronlund,Josip Perkovic,Emma Wigmore,Sean T. May,Michael W. Bevan,Christian Meyer,Silvia Rubio-Díaz,Detlef Weigel,José Luis Micol,Vicky Buchanan-Wollaston,Fabio Fiorani,Sean Walsh,Bernd Rinn,Wilhelm Gruissem,Pierre Hilson,Lars Hennig,Lothar Willmitzer,Christine Granier +26 more
TL;DR: It is revealed that small variations in growing conditions and handling of plants can account for significant differences in phenotypes and molecular profiles obtained in independent laboratories.
Journal ArticleDOI
Phase separation in confined geometries: Solving the Cahn–Hilliard equation with generic boundary conditions
Rainer Kenzler,Frank Eurich,Philipp Maass,Bernd Rinn,Johannes Schropp,Erich Bohl,Wolfgang Dieterich +6 more
TL;DR: In this article, the authors apply implicit numerical methods to solve the Cahn-Hilliard equation for confined systems, where the boundary conditions for hard walls are derived from physical principles.
Journal ArticleDOI
openBIS: a flexible framework for managing and analyzing complex data in biology research
Angela Bauch,Izabela Adamczyk,Piotr Buczek,Franz-Josef Elmer,Franz-Josef Elmer,Kaloyan Enimanev,Kaloyan Enimanev,Pawel Glyzewski,Pawel Glyzewski,Manuel Kohler,Manuel Kohler,Tomasz Pylak,Tomasz Pylak,Andreas Quandt,Chandrasekhar Ramakrishnan,Chandrasekhar Ramakrishnan,Christian Beisel,Lars Malmström,Ruedi Aebersold,Ruedi Aebersold,Bernd Rinn,Bernd Rinn +21 more
TL;DR: openBIS is an open source software framework for constructing user-friendly, scalable and powerful information systems for data and metadata acquired in biological experiments that can be extended and customized for different data types acquired by a range of technologies.