C
Chao Bian
Researcher at Chinese Academy of Sciences
Publications - 79
Citations - 4722
Chao Bian is an academic researcher from Chinese Academy of Sciences. The author has contributed to research in topics: Genome & Whole genome sequencing. The author has an hindex of 22, co-authored 77 publications receiving 3684 citations. Previous affiliations of Chao Bian include Beijing Genomics Institute & University of Macau.
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Journal ArticleDOI
Genome sequence of foxtail millet ( Setaria italica ) provides insights into grass evolution and biofuel potential
Gengyun Zhang,Xin Liu,Zhiwu Quan,Shifeng Cheng,Xun Xu,Shengkai Pan,Min Xie,Peng Zeng,Zhen Yue,Wenliang Wang,Ye Tao,Chao Bian,Changlei Han,Qiuju Xia,Xiaohua Peng,Rui Cao,Xinhua Yang,Dongliang Zhan,Jingchu Hu,Yinxin Zhang,Henan Li,Li Hua,Ning Li,Junyi Wang,Chanchan Wang,Renyi Wang,Tao Guo,Cai Yanjie,Chengzhang Liu,Haitao Xiang,Qiuxiang Shi,Huang Ping,Qingchun Chen,Yingrui Li,Jun Wang,Zhao Zhihai,Jian Wang +36 more
TL;DR: A draft genome anchored onto nine chromosomes and annotated 38,801 genes was produced and key chromosome reshuffling events were detected through collinearity identification between foxtail millet, rice and sorghum.
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Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)
Yang Dong,Yang Dong,Min Xie,Yu Jiang,Yu Jiang,Nianqing Xiao,Xiaoyong Du,Wenguang Zhang,Wenguang Zhang,Gwenola Tosser-Klopp,Jinhuan Wang,Shuang Yang,Jie Liang,Wenbin Chen,Jing Chen,Peng Zeng,Yong Hou,Chao Bian,Shengkai Pan,Yuxiang Li,Xin Liu,Wenliang Wang,Bertrand Servin,B.L. Sayre,Bin Zhu,Deacon John Sweeney,Rich Moore,Wenhui Nie,Yongyi Shen,Yongyi Shen,Ruoping Zhao,Guojie Zhang,Jinquan Li,Thomas Faraut,James E. Womack,Ya-Ping Zhang,James Kijas,Noelle E. Cockett,Xun Xu,Xun Xu,Shuhong Zhao,Jun Wang,Wen Wang +42 more
TL;DR: This study shows that whole-genome mapping technology can be used for the de novo assembly of large genomes and compares transcriptomic analysis of the primary and secondary follicles of a cashmere goat to reveal 51 genes that are differentially expressed between the two types of hair follicles.
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The sheep genome illuminates biology of the rumen and lipid metabolism
Yu Jiang,Yu Jiang,Yu Jiang,Min Xie,Wenbin Chen,Richard Talbot,Jillian F. Maddox,Thomas Faraut,Chunhua Wu,Donna M. Muzny,Yuxiang Li,Wenguang Zhang,Wenguang Zhang,Jo-Ann L. Stanton,Rudiger Brauning,W. Barris,Thibaut Hourlier,Thibaut Hourlier,Bronwen Aken,Bronwen Aken,Stephen M. J. Searle,David L. Adelson,Chao Bian,Graham R. Cam,Yulin Chen,Shifeng Cheng,Udaya DeSilva,Karen Dixen,Yang Dong,Guangyi Fan,I.R. Franklin,Shaoyin Fu,Pablo Fuentes-Utrilla,Rui Guan,Margaret A. Highland,Margaret A. Highland,Michael Holder,Guodong Huang,Aaron Ingham,Shalini N. Jhangiani,Divya Kalra,Christie Kovar,Sandra L. Lee,Weiqing Liu,Xin Liu,Changxin Lu,Tian Lv,Tittu Mathew,Sean McWilliam,Moira Menzies,Shengkai Pan,David Robelin,Bertrand Servin,David Townley,Wenliang Wang,Bin Wei,Stephen N. White,Stephen N. White,Xinhua Yang,Chen Ye,Yaojing Yue,Peng Zeng,Qing Zhou,Jacob B. Hansen,Karsten Kristiansen,Richard A. Gibbs,Paul Flicek,Christopher C. Warkup,Huw E. Jones,V. Hutton Oddy,Frank W. Nicholas,John C. McEwan,James Kijas,Jun Wang,Kim C. Worley,Alan Archibald,Noelle E. Cockett,Xun Xu,Wen Wang,Brian P. Dalrymple +79 more
TL;DR: A genome for ewe and ewe Sheep-specific genetic changes underlie differences in lipid metabolism between sheep and other mammals, and may have contributed to the production of wool.
Journal ArticleDOI
Genomic landscapes of Chinese hamster ovary cell lines as revealed by the Cricetulus griseus draft genome
Nathan E. Lewis,Xin Liu,Yuxiang Li,Harish Nagarajan,George Yerganian,Edward J. O’Brien,Aarash Bordbar,Anne M Roth,Jeffrey Rosenbloom,Chao Bian,Min Xie,Wenbin Chen,Ning Li,Deniz Baycin-Hizal,Haythem Latif,Jochen Förster,Michael J. Betenbaugh,Iman Famili,Xun Xu,Jun Wang,Bernhard O. Palsson +20 more
TL;DR: This analysis identified hamster genes missing in different CHO cell lines, and detected >3.7 million single-nucleotide polymorphisms (SNPs), 551,240 indels and 7,063 copy number variations.
Journal ArticleDOI
The genome sequence of the orchid Phalaenopsis equestris
Jing Cai,Xin Liu,Kevin Vanneste,Sebastian Proost,Wen Chieh Tsai,Ke-Wei Liu,Li-Jun Chen,Ying He,Qing Xu,Chao Bian,Zhijun Zheng,Fengming Sun,Weiqing Liu,Yu Yun Hsiao,Zhao-Jun Pan,Chia Chi Hsu,Ya-Ping Yang,Yi-Chin Hsu,Yu-Chen Chuang,Anne Dievart,Jean-François Dufayard,Xun Xu,Junyi Wang,Jun Wang,Xin-Ju Xiao,Xue-Min Zhao,Rong Du,Guo-Qiang Zhang,Meina Wang,Yong-Yu Su,Gao-Chang Xie,Guo-Hui Liu,Liqiang Li,Laiqiang Huang,Yi-Bo Luo,Hong-Hwa Chen,Yves Van de Peer,Zhong-Jian Liu +37 more
TL;DR: The genome sequence of the tropical epiphytic orchid Phalaenopsis equestris, a frequently used parent species for orchid breeding, is presented and evidence for an orchid-specific paleopolyploidy event that preceded the radiation of most orchid clades is found.