C
Christelle Borel
Researcher at University of Geneva
Publications - 79
Citations - 7466
Christelle Borel is an academic researcher from University of Geneva. The author has contributed to research in topics: Gene & Regulation of gene expression. The author has an hindex of 38, co-authored 75 publications receiving 6736 citations. Previous affiliations of Christelle Borel include French Institute of Health and Medical Research & Icahn School of Medicine at Mount Sinai.
Papers
More filters
Journal ArticleDOI
A User's Guide to the Encyclopedia of DNA Elements (ENCODE)
Richard M. Myers,John A. Stamatoyannopoulos,Michael Snyder,Ian Dunham,Ross C. Hardison,Bradley E. Bernstein,Bradley E. Bernstein,Thomas R. Gingeras,W. James Kent,Ewan Birney,Barbara J. Wold,Gregory E. Crawford,Charles B. Epstein,Noam Shoresh,Jason Ernst,Jason Ernst,Tarjei S. Mikkelsen,Pouya Kheradpour,Pouya Kheradpour,Xiaolan Zhang,Li Wang,Robbyn Issner,Michael Coyne,Timothy Durham,Manching Ku,Thanh Truong,Lucas D. Ward,Lucas D. Ward,Robert C. Altshuler,Michael F. Lin,Michael F. Lin,Manolis Kellis,Manolis Kellis,Carrie A. Davis,Philipp Kapranov,Alexander Dobin,Chris Zaleski,Felix Schlesinger,Philippe Batut,Sudipto K. Chakrabortty,Sonali Jha,Wei Lin,Jorg Drenkow,Huaien Wang,Kim Bell,Ian Bell,Hui Gao,Erica Dumais,Jacqueline Dumais,Stylianos E. Antonarakis,Catherine Ucla,Christelle Borel,Roderic Guigó,Sarah Djebali,Julien Lagarde,Colin Kingswood,Paolo Ribeca,Micha Sammeth,Tyler Alioto,Angelika Merkel,Hagen Tilgner,Piero Carninci,Yoshihide Hayashizaki,Timo Lassmann,Hazuki Takahashi,Rehab F. Abdelhamid,Gregory J. Hannon,Katalin Toth Fejes,Jonathan B. Preall,Assaf Gordon,Vihra Sotirova,Alexandre Reymond,Cédric Howald,Emilie Aït Yahya Graison,Jacqueline Chrast,Yijun Ruan,Xiaoan Ruan,Atif Shahab,Wan Ting Poh,Chia-Lin Wei,Terrence S. Furey,Alan P. Boyle,Nathan C. Sheffield,Lingyun Song,Yoichiro Shibata,Teresa Vales,Deborah R. Winter,Zhancheng Zhang,Darin London,Tianyuan Wang,Damian Keefe,Vishwanath R. Iyer,Bum Kyu Lee,Ryan M. McDaniell,Zheng Liu,Anna Battenhouse,Akshay Bhinge,Jason D. Lieb,Linda L. Grasfeder,Kimberly A. Showers,Paul G. Giresi,Seul K.C. Kim,Christopher Shestak,Florencia Pauli,Timothy E. Reddy,Jason Gertz,E. Christopher Partridge,Preti Jain,Rebekka O. Sprouse,Anita Bansal,Barbara N. Pusey,Michael Muratet,Katherine E. Varley,Kevin M. Bowling,Kimberly M. Newberry,Amy S. Nesmith,Jason A. Dilocker,Stephanie L. Parker,Lindsay L. Waite,Krista Thibeault,Kevin Roberts,Devin Absher,Ali Mortazavi,Brian Williams,Georgi K. Marinov,Diane Trout,Brandon King,Kenneth McCue,Anthony Kirilusha,Gilberto DeSalvo,Katherine Aylor Fisher,Henry Amrhein,Shirley Pepke,Jost Vielmetter,Gavin Sherlock,Arend Sidow,Serafim Batzoglou,Rami Rauch,Anshul Kundaje,Max Libbrecht,Elliott H. Margulies,Stephen C. J. Parker,Laura Elnitski,Eric D. Green,Tim Hubbard,Jennifer Harrow,Stephen M. J. Searle,Felix Kokocinski,Felix Kokocinski,Browen Aken,Adam Frankish,Toby Hunt,Gloria Despacio-Reyes,M. Kay,Gaurab Mukherjee,Alexandra Bignell,Gary Saunders,Veronika Boychenko,Michael R. Brent,M. van Baren,Randall H. Brown,Mark Gerstein,Mark Gerstein,Ekta Khurana,Suganthi Balasubramanian,Hugo Y. K. Lam,Philip Cayting,Philip Cayting,R. Robilotto,Zhi Lu,Thomas Derrien,Andrea Tanzer,David G. Knowles,Marco Mariotti,David Haussler,Rachel A. Harte,Mark Diekhans,Michael F. Lin,Michael F. Lin,Alfonso Valencia,Michael L. Tress,Stephen G. Landt,Stephen G. Landt,Debasish Raha,Minyi Shi,Ghia Euskirchen,Fabian Grubert,Maya Kasowski,Jin Lian,Phil Lacroute,Youhan Xu,Hannah Monahan,Dorrelyn Patacsil,Teri Slifer,Xinqiong Yang,Alexandra Charos,Brian Reed,Linfeng Wu,Raymond K. Auerbach,Lukas Habegger,Manoj Hariharan,Joel Rozowsky,Alexej Abyzov,Sherman M. Weissman,Kevin Struhl,Nathan Lamarre-Vincent,Marianne Lindahl-Allen,Benoit Miotto,Zarmik Moqtaderi,Joseph D. Fleming,Peter E. Newburger,Peggy J. Farnham,Peggy J. Farnham,Seth Frietze,Seth Frietze,Henriette O'Geen,Xiaoqin Xu,Kim Blahnik,Alina R. Cao,Sushma Iyengar,Rajinder Kaul,Robert E. Thurman,Hao Wang,Patrick A. Navas,Richard Sandstrom,Peter J. Sabo,Molly Weaver,Theresa K. Canfield,Kristen Lee,Shane Neph,Vaughan Roach,Alex Reynolds,Audra K. Johnson,Eric Rynes,Erika Giste,Shinny Vong,Jun Neri,Tristan Frum,Eric D. Nguyen,Abigail K. Ebersol,Minerva E. Sanchez,Hadar H. Sheffer,Dimitra Lotakis,Eric Haugen,Richard Humbert,Tanya Kutyavin,Tony Shafer,William Stafford Noble,Job Dekker,Bryan R. Lajoie,Amartya Sanyal,Kate R. Rosenbloom,Timothy R. Dreszer,Brian J. Raney,Galt P. Barber,Laurence R. Meyer,Cricket A. Sloan,Venkat S. Malladi,Melissa S. Cline,Katrina Learned,Vanessa K. Swing,Ann S. Zweig,Brooke Rhead,Pauline A. Fujita,Krishna M. Roskin,Donna Karolchik,Robert M. Kuhn,Steven P. Wilder,Daniel Sobral,Javier Herrero,Kathryn Beal,Margus Lukk,Alvis Brazma,Juan M. Vaquerizas,Nicholas M. Luscombe,Peter J. Bickel,Nathan Boley,James B. Brown,Qiang Li,Haiyan Huang,Andrea Sboner,Kevin Y. Yip,Chao Cheng,Koon-Kiu Yan,Nitin Bhardwaj,Jing Wang,Lucas Lochovsky,Justin Jee,Theodore Gibson,Jing Leng,Jiang Du,Robert S. Harris,Giltae Song,Webb Miller,Bernard B. Suh,Benedict Paten,Michael M. Hoffman,Orion J. Buske,Zhiping Weng,Xianjun Dong,Jie Wang,Hualin Xi,Scott A. Tenenbaum,Frank Doyle,Sridar V. Chittur,Luiz O. F. Penalva,Thomas D. Tullius,Kevin P. White,Subhradip Karmakar,Alec Victorsen,Nader Jameel,Nick Bild,Robert L. Grossman,Patrick J. Collins,Nathan D. Trinklein,Morgan C. Giddings,Morgan C. Giddings,Jainab Khatun,Christopher W. Maier,Ting Wang,Troy W. Whitfield,Xian Chen,Yanbao Yu,Harsha P. Gunawardena,Elise A. Feingold,Rebecca F. Lowdon,Laura A.L. Dillon,Peter J. Good,Brian A. Risk +328 more
TL;DR: An overview of the project and the resources it is generating and the application of ENCODE data to interpret the human genome are provided.
Journal ArticleDOI
Common Regulatory Variation Impacts Gene Expression in a Cell Type–Dependent Manner
Antigone S. Dimas,Samuel Deutsch,Barbara E. Stranger,Barbara E. Stranger,Stephen B. Montgomery,Christelle Borel,Homa Attar-Cohen,Catherine E. Ingle,Claude Beazley,Maria Gutierrez Arcelus,Magdalena Sekowska,Marilyne Gagnebin,James Nisbett,Panos Deloukas,Emmanouil T. Dermitzakis,Stylianos E. Antonarakis +15 more
TL;DR: The data suggest that the complete regulatory variant repertoire can only be uncovered in the context of cell-type specificity, and identifies multiple expressive quantitative trait loci per gene, unique or shared among cell types and positively correlated with the number of transcripts per gene.
Journal ArticleDOI
Genetic structure of Europeans: a view from the North-East
Mari Nelis,Mari Nelis,Tõnu Esko,Tõnu Esko,Reedik Mägi,Fritz Zimprich,Alexander Zimprich,Draga Toncheva,Sena Karachanak,T. Piskackova,Ivan Balascak,Leena Peltonen,Eveliina Jakkula,Karola Rehnström,Mark Lathrop,Mark Lathrop,Simon Heath,Pilar Galan,Stefan Schreiber,Thomas Meitinger,Arne Pfeufer,H-Erich Wichmann,Béla Melegh,Noémi Polgár,Daniela Toniolo,Paolo Gasparini,Pio D'Adamo,Janis Klovins,Liene Nikitina-Zake,Vaidutis Kučinskas,Jūratė Kasnauskienė,Jan Lubinski,Tadeusz Dębniak,Svetlana A. Limborska,Andrey Khrunin,Xavier Estivill,Raquel Rabionet,Sara Marsal,Antonio Julià,Stylianos E. Antonarakis,Samuel Deutsch,Christelle Borel,Homa Attar,Maryline Gagnebin,Milan Macek,Michael Krawczak,Maido Remm,Andres Metspalu,Andres Metspalu +48 more
TL;DR: This analysis revealed that the genetic structure of the European population correlates closely with geography, and allows the creation of a comprehensive European genetic map that will greatly facilitate inter-population genetic studies including genome wide association studies (GWAS).
Journal ArticleDOI
Passive and active DNA methylation and the interplay with genetic variation in gene regulation
Maria Gutierrez-Arcelus,Maria Gutierrez-Arcelus,Tuuli Lappalainen,Tuuli Lappalainen,Stephen B. Montgomery,Stephen B. Montgomery,Alfonso Buil,Alfonso Buil,Halit Ongen,Halit Ongen,Alisa Yurovsky,Alisa Yurovsky,Julien Bryois,Julien Bryois,Thomas Giger,Luciana Romano,Luciana Romano,Alexandra Planchon,Alexandra Planchon,Emilie Falconnet,Deborah Bielser,Maryline Gagnebin,Ismael Padioleau,Ismael Padioleau,Christelle Borel,Audrey Letourneau,Periklis Makrythanasis,Michel Guipponi,Corinne Gehrig,Stylianos E. Antonarakis,Emmanouil T. Dermitzakis,Emmanouil T. Dermitzakis +31 more
TL;DR: It is shown that unlike genetic regulatory variation, DNA methylation alone does not significantly drive allele specific expression, and inferred mechanistic relationships using genetic variation as well as correlations with TF abundance reveal both a passive and active role of DNAmethylation to regulatory interactions influencing gene expression.
Journal ArticleDOI
Human microRNA-155 on Chromosome 21 Differentially Interacts with Its Polymorphic Target in the AGTR1 3′ Untranslated Region: A Mechanism for Functional Single-Nucleotide Polymorphisms Related to Phenotypes
Praveen Sethupathy,Christelle Borel,Maryline Gagnebin,Gregory R. Grant,Samuel Deutsch,Terry S. Elton,Artemis G. Hatzigeorgiou,Stylianos E. Antonarakis +7 more
TL;DR: The 1166C allele may be functionally associated with hypertension by abrogating regulation by hsa-miR-155, thereby elevating AGTR1 levels, and mapping annotated SNPs onto a collection of experimentally supported human miRNA targets found one of these target sites containing SNP rs5186.