D
D. Jasper G. Rees
Researcher at University of the Western Cape
Publications - 15
Citations - 2448
D. Jasper G. Rees is an academic researcher from University of the Western Cape. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 13, co-authored 14 publications receiving 2099 citations.
Papers
More filters
Journal ArticleDOI
The genome of woodland strawberry ( Fragaria vesca )
Vladimir Shulaev,Daniel J. Sargent,Ross N. Crowhurst,Todd C. Mockler,Otto Folkerts,Arthur L. Delcher,Pankaj Jaiswal,Keithanne Mockaitis,Aaron Liston,Shrinivasrao P. Mane,Paul Burns,Thomas M. Davis,Janet P. Slovin,Nahla V. Bassil,Roger P. Hellens,Clive Evans,Tim Harkins,Chinnappa D. Kodira,Brian Desany,Oswald Crasta,Roderick V. Jensen,Andrew C. Allan,Andrew C. Allan,Todd P. Michael,João C. Setubal,Jean-Marc Celton,D. Jasper G. Rees,Kelly P. Williams,Sarah H. Holt,Juan Jairo Ruiz Rojas,Mithu Chatterjee,Bo Liu,Herman Silva,Lee A. Meisel,Avital Adato,Sergei A. Filichkin,Michela Troggio,Roberto Viola,Tia-Lynn Ashman,Hao Wang,Palitha Dharmawardhana,Justin Elser,Rajani Raja,Henry D. Priest,Douglas W. Bryant,Samuel E. Fox,Scott A. Givan,Larry J. Wilhelm,Sushma Naithani,Alan Christoffels,David Y. Salama,Jade Carter,Elena Lopez Girona,Anna Zdepski,Wenqin Wang,Randall A. Kerstetter,Wilfried Schwab,Schuyler S. Korban,Jahn Davik,Amparo Monfort,Beatrice Denoyes-Rothan,Pere Arús,Ron Mittler,Barry S. Flinn,Asaph Aharoni,Jeffrey L. Bennetzen,Steven L. Salzberg,Allan W. Dickerman,Riccardo Velasco,Mark Borodovsky,Richard E. Veilleux,Kevin M. Folta +71 more
TL;DR: New phylogenetic analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted, and macrosyntenic relationships between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes.
Journal ArticleDOI
High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development
Nicolas Daccord,Jean-Marc Celton,Gareth Linsmith,Claude Becker,Nathalie Choisne,Elio Schijlen,Henri van de Geest,Luca Bianco,Diego Micheletti,Riccardo Velasco,Erica A. Di Pierro,Jérôme Gouzy,D. Jasper G. Rees,Philippe Guérif,Helene Muranty,Charles-Eric Durel,François Laurens,Yves Lespinasse,Sylvain Gaillard,Sébastien Aubourg,Hadi Quesneville,Detlef Weigel,Eric van de Weg,Michela Troggio,Etienne Bucher +24 more
TL;DR: High-quality de novo assembly of the apple genome is produced and genome-wide DNA methylation data suggest that epigenetic marks may contribute to agronomically relevant aspects, such as apple fruit development.
Journal ArticleDOI
Deep sequencing analysis of viruses infecting grapevines: Virome of a vineyard
Coetzee B,Michael John Freeborough,Hans J. Maree,Jean-Marc Celton,D. Jasper G. Rees,Johan T. Burger +5 more
TL;DR: It was found that Grapevine leafroll-associated virus 3 (GLRaV-3) is the most prevalent species, constituting 59% of the total reads, followed by Grapevine rupestris stem pitting- associated virus and Grapevine virus A.
Journal ArticleDOI
Genome-wide association analysis of agronomic traits in wheat under drought-stressed and non-stressed conditions.
TL;DR: The MTAs reported in this population could be useful to initiate marker-assisted selection and targeted trait introgression of wheat under drought-stressed and non-Stressed conditions, and for fine mapping and cloning of the underlying genes and QTL.
Journal ArticleDOI
RBBP6 Interacts with Multifunctional Protein YB-1 through Its RING Finger Domain, Leading to Ubiquitination and Proteosomal Degradation of YB-1
Moredreck Chibi,Mervin Meyer,Amanda Skepu,D. Jasper G. Rees,Johanna C. Moolman-Smook,David J.R. Pugh +5 more
TL;DR: It is shown that both full-length RBBP6 and the isolated RING finger domain were able to ubiquitinate YB-1, resulting in its degradation in the proteosome, and that R BBP6 was able to suppress the levels of Yb-1 in vivo and to reduce its transactivational ability.