D
Duy Pham Thanh
Researcher at University of Oxford
Publications - 40
Citations - 2160
Duy Pham Thanh is an academic researcher from University of Oxford. The author has contributed to research in topics: Salmonella typhi & Typhoid fever. The author has an hindex of 20, co-authored 39 publications receiving 1756 citations. Previous affiliations of Duy Pham Thanh include University of London.
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Journal ArticleDOI
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter- and intracontinental transmission events
Vanessa K. Wong,Vanessa K. Wong,Stephen Baker,Stephen Baker,Stephen Baker,Derek Pickard,Julian Parkhill,Andrew J. Page,Nicholas A. Feasey,Robert A. Kingsley,Robert A. Kingsley,Nicholas R. Thomson,Nicholas R. Thomson,Jacqueline A. Keane,François-Xavier Weill,David J. Edwards,Jane Hawkey,Simon R. Harris,Alison E. Mather,Amy K. Cain,James Hadfield,Peter J. Hart,Nga Tran Vu Thieu,Elizabeth J. Klemm,Dafni A. Glinos,Robert F. Breiman,Robert F. Breiman,Robert F. Breiman,Conall H. Watson,Samuel Kariuki,Samuel Kariuki,Melita A. Gordon,Robert S. Heyderman,Chinyere K. Okoro,Jan Jacobs,Jan Jacobs,Octavie Lunguya,W. John Edmunds,Chisomo L. Msefula,José A. Chabalgoity,Mike Kama,Kylie Jenkins,Shanta Dutta,Florian Marks,Josefina Campos,Corinne N. Thompson,Corinne N. Thompson,Stephen K. Obaro,Calman A. MacLennan,Calman A. MacLennan,Calman A. MacLennan,Christiane Dolecek,Karen H. Keddy,Anthony M. Smith,Christopher M. Parry,Christopher M. Parry,Abhilasha Karkey,E. Kim Mulholland,James Campbell,James Campbell,Sabina Dongol,Buddha Basnyat,Muriel Dufour,Don Bandaranayake,Take Toleafoa Naseri,Shalini Singh,Mochammad Hatta,Paul N. Newton,Paul N. Newton,Robert S. Onsare,Lupeoletalalei Isaia,David A. B. Dance,David A. B. Dance,Viengmon Davong,Guy E. Thwaites,Guy E. Thwaites,Lalith Wijedoru,John A. Crump,Elizabeth de Pinna,Satheesh Nair,Eric J. Nilles,Duy Pham Thanh,Paul Turner,Paul Turner,Paul Turner,Sona Soeng,Mary Valcanis,Joan Powling,Karolina Dimovski,Geoff Hogg,Jeremy Farrar,Jeremy Farrar,Kathryn E. Holt,Gordon Dougan +93 more
TL;DR: This whole-genome sequence analysis of Salmonella enterica serovar Typhi identifies a single dominant MDR lineage, H58, that has emerged and spread throughout Asia and Africa over the last 30 years, and identifies numerous transmissions of H58.
Journal ArticleDOI
Intercontinental dissemination of azithromycin-resistant shigellosis through sexual transmission: a cross-sectional study
Kate S. Baker,Timothy J. Dallman,Philip Ashton,Martin Day,Gwenda Hughes,Paul Crook,V L Gilbart,Sandra Zittermann,Vanessa Allen,Benjamin P Howden,Benjamin P Howden,Takehiro Tomita,Mary Valcanis,Simon R. Harris,Thomas R. Connor,Vitali Sintchenko,Vitali Sintchenko,Peter Howard,Jeremy D Brown,Nicola K. Petty,Malika Gouali,Duy Pham Thanh,Karen H. Keddy,Anthony M. Smith,Kaisar A. Talukder,Shah M. Faruque,Julian Parkhill,Stephen Baker,Stephen Baker,François-Xavier Weill,Claire Jenkins,Nicholas R. Thomson,Nicholas R. Thomson +32 more
TL;DR: The intercontinental spread of antimicrobial-resistant shigella through established transmission routes emphasises the need for new approaches to tackle the public health challenge of sexually transmitted infections in MSM.
Journal ArticleDOI
The Ecological Dynamics of Fecal Contamination and Salmonella Typhi and Salmonella Paratyphi A in Municipal Kathmandu Drinking Water
Abhilasha Karkey,Thibaut Jombart,Alan W. Walker,Alan W. Walker,Corinne N. Thompson,Andrés Torres,Sabina Dongol,Nga Tran Vu Thieu,Duy Pham Thanh,Dung Tran Thi Ngoc,Phat Voong Vinh,Andrew C. Singer,Julian Parkhill,Guy E. Thwaites,Buddha Basnyat,Neil M. Ferguson,Stephen Baker,Stephen Baker +17 more
TL;DR: This study represents the first extensive spatiotemporal investigation of water pollution in an endemic typhoid fever setting and implicates highly localized human waste as the major contributor to poor water quality in the Kathmandu Valley.
Journal ArticleDOI
The genomic signatures of Shigella evolution, adaptation and geographical spread
TL;DR: The evolutionary relationships between Shigella spp.
Journal ArticleDOI
Tracking the establishment of local endemic populations of an emergent enteric pathogen
Kathryn E. Holt,Tran Vu Thieu Nga,Duy Pham Thanh,Ha Vinh,Dong Wook Kim,Dong Wook Kim,My Phan Vu Tra,James Campbell,Nguyen Van Minh Hoang,Nguyen Thanh Vinh,Pham Van Minh,Cao Thu Thuy,Tran Thi Thu Nga,Corinne N. Thompson,Tran Thi Ngoc Dung,Nguyen Thi Khanh Nhu,Phat Voong Vinh,Pham Thi Ngoc Tuyet,Hoang Le Phuc,Nguyen Thi Nam Lien,Bui Duc Phu,Nguyen Thi Thuy Ai,Nguyen Manh Tien,Nguyen Dong,Christopher M. Parry,Tran Tinh Hien,Jeremy Farrar,Julian Parkhill,Gordon Dougan,Nicholas R. Thomson,Stephen Baker,Stephen Baker +31 more
TL;DR: The data show that S. sonnei was introduced into Vietnam in the 1980s and has undergone localized clonal expansion, punctuated by genomic fixation events through periodic selective sweeps, which confer high-level antimicrobial resistance and the ability to kill other gut bacteria.