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Elli Papaemmanuil
Researcher at Memorial Sloan Kettering Cancer Center
Publications - 15
Citations - 965
Elli Papaemmanuil is an academic researcher from Memorial Sloan Kettering Cancer Center. The author has contributed to research in topics: Multiple myeloma & Somatic evolution in cancer. The author has an hindex of 9, co-authored 15 publications receiving 344 citations. Previous affiliations of Elli Papaemmanuil include Kettering University.
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Journal ArticleDOI
Cancer therapy shapes the fitness landscape of clonal hematopoiesis
Kelly L. Bolton,Ryan Ptashkin,Teng Gao,Lior Z. Braunstein,Sean M. Devlin,Daniel Kelly,Minal Patel,Antonin Berthon,Aijazuddin Syed,Mariko Yabe,Catherine C. Coombs,Nicole M. Caltabellotta,Michael Walsh,Kenneth Offit,Zsofia K. Stadler,Diana Mandelker,Jessica Schulman,Akshar Patel,John Philip,Elsa Bernard,Gunes Gundem,Juan E. Arango Ossa,Max Levine,Juan S. Medina Martinez,Noushin Farnoud,Dominik Glodzik,Sonya Li,Mark E. Robson,Choonsik Lee,Paul D.P. Pharoah,Konrad H. Stopsack,Barbara Spitzer,Simon Mantha,James A. Fagin,Laura Boucai,Christopher J. Gibson,Benjamin L. Ebert,Andrew L. Young,Todd E. Druley,Koichi Takahashi,Nancy K. Gillis,Markus Ball,Eric Padron,David M. Hyman,David M. Hyman,José Baselga,Larry Norton,Larry Norton,Stuart Gardos,Stuart Gardos,Virginia M. Klimek,Virginia M. Klimek,Howard I. Scher,Howard I. Scher,Dean F. Bajorin,Dean F. Bajorin,Eder Paraiso,Ryma Benayed,Maria E. Arcila,Marc Ladanyi,David B. Solit,Michael F. Berger,Martin S. Tallman,Montserrat Garcia-Closas,Nilanjan Chatterjee,Luis A. Diaz,Ross L. Levine,Lindsay M. Morton,Ahmet Zehir,Elli Papaemmanuil +69 more
TL;DR: It is found mutations are selected differentially based on exposures, whereas cancer therapy with radiation, platinum and topoisomerase II inhibitors preferentially selects for mutations in DNA damage response genes (TP53, PPM1D, CHEK2).
Journal ArticleDOI
Implications of TP53 allelic state for genome stability, clinical presentation and outcomes in myelodysplastic syndromes
Elsa Bernard,Yasuhito Nannya,Robert P. Hasserjian,Sean M. Devlin,Heinz Tuechler,Juan S. Medina-Martinez,Tetsuichi Yoshizato,Yusuke Shiozawa,Ryunosuke Saiki,Luca Malcovati,Max Levine,Juan E. Arango,Yangyu Zhou,Francesc Solé,Catherine Cargo,Detlef Haase,Maria Creignou,Ulrich Germing,Yanming Zhang,Gunes Gundem,Araxe Sarian,Arjan A. van de Loosdrecht,Martin Jädersten,Magnus Tobiasson,Olivier Kosmider,Matilde Y. Follo,Felicitas Thol,Ronald Feitosa Pinheiro,Valeria Santini,Ioannis Kotsianidis,Jacqueline Boultwood,Fabio P.S. Santos,Julie Schanz,Senji Kasahara,Takayuki Ishikawa,Hisashi Tsurumi,Akifumi Takaori-Kondo,Toru Kiguchi,Chantana Polprasert,John M. Bennett,Virginia M. Klimek,Michael R. Savona,Monika Belickova,Christina Ganster,Laura Palomo,Guillermo Sanz,Lionel Ades,Matteo G. Della Porta,Alexandra Smith,Yesenia Werner,Minal Patel,Agnes Viale,Katelynd Vanness,Donna Neuberg,Kristen E. Stevenson,Kamal Menghrajani,Kelly L. Bolton,Pierre Fenaux,Andrea Pellagatti,Uwe Platzbecker,Michael Heuser,Peter Valent,Shigeru Chiba,Yasushi Miyazaki,Carlo Finelli,Maria Teresa Voso,Lee Yung Shih,Michaela Fontenay,Joop H. Jansen,José Cervera,Yoshiko Atsuta,Norbert Gattermann,Benjamin L. Ebert,Rafael Bejar,Peter L. Greenberg,Mario Cazzola,Eva Hellström-Lindberg,Seishi Ogawa,Elli Papaemmanuil +78 more
TL;DR: Clinical sequencing across a large prospective cohort of patients with myelodysplasic syndrome uncovers distinct associations between the mono- and biallelic states of TP53 and clinical presentation.
Journal ArticleDOI
Isoform Switching as a Mechanism of Acquired Resistance to Mutant Isocitrate Dehydrogenase Inhibition.
James J. Harding,Maeve A. Lowery,Alan H. Shih,Juan M. Schvartzman,Shengqi Hou,Christopher Famulare,Minal Patel,Mikhail Roshal,Richard K. G. Do,Ahmet Zehir,Daoqi You,S. Duygu Selcuklu,Agnes Viale,Martin S. Tallman,David M. Hyman,Ed Reznik,Lydia W.S. Finley,Elli Papaemmanuil,Alessandra Tosolini,Mark G. Frattini,Kyle J. MacBeth,Guowen Liu,Bin Fan,Sung Choe,Bin Wu,Yelena Y. Janjigian,Ingo K. Mellinghoff,Luis A. Diaz,Ross L. Levine,Ghassan K. Abou-Alfa,Eytan M. Stein,Andrew M. Intlekofer +31 more
TL;DR: Four clinical cases are described that identify mutant IDH isoform switching, either from Mutant IDH1 to mutant IDh2 or vice versa, as a mechanism of acquired clinical resistance to IDH inhibition in solid and liquid tumors.
Journal ArticleDOI
Interplay between chromosomal alterations and gene mutations shapes the evolutionary trajectory of clonal hematopoiesis
Teng Gao,Ryan Ptashkin,Kelly L. Bolton,Maria Sirenko,Christopher J. Fong,Barbara Spitzer,Kamal Menghrajani,Juan E. Arango Ossa,Yangyu Zhou,Elsa Bernard,Max Levine,Juan S. Medina Martinez,Yanming Zhang,Sebastià Franch-Expósito,Minal Patel,Lior Z. Braunstein,Daniel Kelly,Mariko Yabe,Ryma Benayed,Nicole M. Caltabellotta,John Philip,Ederlinda Paraiso,Simon Mantha,David B. Solit,Luis A. Diaz,Michael F. Berger,Virginia M. Klimek,Virginia M. Klimek,Ross L. Levine,Ahmet Zehir,Sean M. Devlin,Elli Papaemmanuil +31 more
TL;DR: In this article, the authors leverage peripheral blood sequencing data from 32,442 cancer patients to jointly characterize gene mutations and mosaic chromosomal alterations (mCAs) in clonal hematopoiesis (CH), a common state in cancer patients associated with a heightened risk of leukemia development.
Journal ArticleDOI
Comprehensive detection of recurring genomic abnormalities: a targeted sequencing approach for multiple myeloma.
Venkata Yellapantula,Malin Hultcrantz,Malin Hultcrantz,Even H Rustad,Ester Wasserman,Dory Londono,Robert Cimera,Amanda Ciardiello,Heather Landau,Theresia Akhlaghi,Sham Mailankody,Minal Patel,Juan S. Medina-Martinez,Juan E. Arango Ossa,Max Levine,Niccolo Bolli,Francesco Maura,Ahmet Dogan,Elli Papaemmanuil,Yanming Zhang,Ola Landgren +20 more
TL;DR: It is shown that a multiple myeloma designed custom capture NGS panel can detect IGH translocations and CNAs with very high concordance in relation to FISH and SNP microarrays and importantly captures the most relevant and recurrent somatic mutations in multipleMyeloma rendering this approach highly suitable for clinical application in the modern era.