K
Kaye D. Speicher
Researcher at Wistar Institute
Publications - 21
Citations - 1726
Kaye D. Speicher is an academic researcher from Wistar Institute. The author has contributed to research in topics: Endoplasmic reticulum & Membrane protein. The author has an hindex of 17, co-authored 21 publications receiving 1629 citations.
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Journal ArticleDOI
A HUPO test sample study reveals common problems in mass spectrometry–based proteomics
Alexander W. Bell,Eric W. Deutsch,Catherine E. Au,Robert E. Kearney,Ron Beavis,Salvatore Sechi,Tommy Nilsson,John J.M. Bergeron,Thomas A. Beardslee,Thomas Chappell,Gavin Meredith,Peter J. Sheffield,Phillip Gray,Mahbod Hajivandi,Marshall Pope,Paul F. Predki,Majlinda Kullolli,Marina Hincapie,William S. Hancock,Wei Jia,Lina Song,Lei Li,Junying Wei,Bing Yang,Jinglan Wang,Wantao Ying,Yangjun Zhang,Yun Cai,Xiaohong Qian,Fuchu He,Helmut E. Meyer,Christian Stephan,Martin Eisenacher,Katrin Marcus,Elmar Langenfeld,Caroline May,Steve A. Carr,Rushdy Ahmad,Wenhong Zhu,Jeffrey W. Smith,Samir M. Hanash,Jason J. Struthers,Hong Wang,Qing Zhang,Yanming An,Radoslav Goldman,Elisabet Carlsohn,Sjoerd van der Post,Kenneth E. Hung,David A. Sarracino,Kenneth C. Parker,Bryan Krastins,Raju Kucherlapati,Sylvie Bourassa,Guy G. Poirier,Eugene A. Kapp,Heather Patsiouras,Robert L. Moritz,Richard J. Simpson,Benoit Houle,Sylvie Laboissiere,Pavel Metalnikov,Vivian Nguyen,Tony Pawson,Catherine C. L. Wong,Daniel Cociorva,John R. Yates,Michael J. Ellison,Ana Lopez-Campistrous,P. D. Semchuk,Yueju Wang,Peipei Ping,Giuliano Elia,Michael J. Dunn,Kieran Wynne,Angela K. Walker,John R. Strahler,Philip C. Andrews,Brian L. Hood,William L. Bigbee,Thomas P. Conrads,Derek Smith,Christoph H. Borchers,Gilles A. Lajoie,Sean C. Bendall,Kaye D. Speicher,David W. Speicher,Masanori Fujimoto,Kazuyuki Nakamura,Young Ki Paik,Sang Yun Cho,Min-Seok Kwon,Hyoung Joo Lee,Seul Ki Jeong,An Sung Chung,Christine A. Miller,Rudolf Grimm,Katy Williams,Craig A. Dorschel,Jayson A. Falkner,Lennart Martens,Juan Antonio Vizcaíno +101 more
TL;DR: Central analysis determined missed identifications, environmental contamination, database matching and curation of protein identifications as sources of problems in liquid chromatography–mass spectrometry–based proteomics.
Journal Article
Systematic analysis of peptide recoveries from in-gel digestions for protein identifications in proteome studies
TL;DR: An optimized in-geltrypsin digestion strategy in which proteins in 1.0-mm-thick gels are stained with Coomassie blue or Ruby Red, digested overnight with modified trypsin, and extracted one or two times with small volumes of aqueous buffer is suggested.
Journal ArticleDOI
Deciphering the human platelet sheddome.
Karen P. Fong,Colin G. Barry,Anh N. Tran,Elizabeth A. Traxler,Kenneth M. Wannemacher,Hsin-Yao Tang,Kaye D. Speicher,Ian A. Blair,David W. Speicher,Tilo Grosser,Lawrence F. Brass +10 more
TL;DR: A subset of membrane proteins are defined as sheddome candidates, forming the basis for further studies examining the impact of ectodomain shedding on platelet function.
Journal ArticleDOI
Erythrocyte detergent-resistant membrane proteins: Their characterization and selective uptake during malarial infection
Sean C. Murphy,Benjamin U. Samuel,Travis Harrison,Kaye D. Speicher,David W. Speicher,Marion E. Reid,Rainer Prohaska,Philip S. Low,Michael J. A. Tanner,Narla Mohandas,Kasturi Haldar +10 more
TL;DR: Ten internalized DRM proteins show varied lipid and peptidic anchors indicating that, contrary to the prevailing model of apicomplexan vacuole formation, DRM association, rather than lipid anchors, provides the preferred criteria for protein recruitment to the malarial vacuoles.
Journal ArticleDOI
Landscape of the mitochondrial Hsp90 metabolome in tumours.
Young Chan Chae,Alessia Angelin,Sofia Lisanti,Andrew V. Kossenkov,Kaye D. Speicher,Huan Wang,James F. Powers,Arthur S. Tischler,Karel Pacak,Stephanie M. J. Fliedner,Ryan D. Michalek,Edward D. Karoly,Douglas C. Wallace,Lucia R. Languino,Lucia R. Languino,David W. Speicher,Dario C. Altieri +16 more
TL;DR: It is reported that Heat Shock Protein 90 (Hsp90)-directed protein folding in mitochondria controls central metabolic networks in tumor cells, including the electron transport chain, citric acid cycle, fatty acid oxidation, amino acid synthesis, and cellular redox status.