M
Michael R. McKain
Researcher at University of Alabama
Publications - 70
Citations - 5178
Michael R. McKain is an academic researcher from University of Alabama. The author has contributed to research in topics: Genome & Andropogoneae. The author has an hindex of 28, co-authored 63 publications receiving 3990 citations. Previous affiliations of Michael R. McKain include Wabash College & University of Georgia.
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Journal ArticleDOI
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
Angélique D'Hont,Jean-Marc Aury,Franc-Christophe Baurens,Françoise Carreel,Olivier Garsmeur,Benjamin Noel,Stéphanie Bocs,Gaëtan Droc,Mathieu Rouard,Corinne Da Silva,Kamel Jabbari,Kamel Jabbari,Kamel Jabbari,Céline Cardi,Julie Poulain,Marlã̈ne Souquet,Karine Labadie,Cyril Jourda,Juliette Lengellé,Marguerite Rodier-Goud,Adriana Alberti,Maria Bernard,Margot Correa,Saravanaraj Ayyampalayam,Michael R. McKain,Jim Leebens-Mack,Diane Burgess,Michael Freeling,Didier Mbéguié-A-Mbéguié,Matthieu Chabannes,Thomas Wicker,Olivier Panaud,Jose Barbosa,E. Hribova,Pat Heslop-Harrison,Rémy Habas,Ronan Rivallan,Philippe Francois,Claire Poiron,Andrzej Kilian,Dheema Burthia,Christophe Jenny,Frédéric Bakry,Spencer Brown,Valentin Guignon,Valentin Guignon,Gert H. J. Kema,Miguel A. Dita,Cees Waalwijk,Steeve Joseph,Anne Dievart,Olivier Jaillon,Olivier Jaillon,Olivier Jaillon,Julie Leclercq,Xavier Argout,Eric Lyons,Ana Maria Rocha de Almeida,Mouna Jeridi,Jaroslav Dolezel,Nicolas Roux,Ange-Marie Risterucci,Jean Weissenbach,Jean Weissenbach,Jean Weissenbach,Manuel Ruiz,Jean-Christophe Glaszmann,Francis Quetier,Nabila Yahiaoui,Patrick Wincker,Patrick Wincker,Patrick Wincker +71 more
TL;DR: This first monocotyledon high-continuity whole-genome sequence reported outside Poales represents an essential bridge for comparative genome analysis in plants and clarifies commelinid-monocotYledon phylogenetic relationships, reveals Poaceae-specific features and has led to the discovery of conserved non-coding sequences predating monocotinoid–eudicotylingon divergence.
Journal ArticleDOI
The pineapple genome and the evolution of CAM photosynthesis
Ray Ming,Ray Ming,Robert VanBuren,Robert VanBuren,Robert VanBuren,Ching Man Wai,Ching Man Wai,Haibao Tang,Haibao Tang,Michael C. Schatz,John E. Bowers,Eric Lyons,Ming Li Wang,Jung Chen,Eric Biggers,Jisen Zhang,Lixian Huang,Lingmao Zhang,Wenjing Miao,Jian Zhang,Zhangyao Ye,Chenyong Miao,Zhicong Lin,Hao Wang,Hongye Zhou,Won Cheol Yim,Henry D. Priest,Chunfang Zheng,Margaret R. Woodhouse,Patrick P. Edger,Romain Guyot,Hao-Bo Guo,Hong Guo,Guangyong Zheng,Ratnesh Singh,Anupma Sharma,Xiang Jia Min,Yun Zheng,Hayan Lee,James Gurtowski,Fritz J. Sedlazeck,Alex Harkess,Michael R. McKain,Zhenyang Liao,Jingping Fang,Juan Liu,Xiaodan Zhang,Qing Zhang,Weichang Hu,Yuan Qin,Kai Wang,Li Yu Chen,Neil J. Shirley,Yann-Rong Lin,Li Yu Liu,Alvaro G. Hernandez,Chris L. Wright,Vincent Bulone,Gerald A. Tuskan,Katy D. Heath,Francis Zee,Paul H. Moore,Ramanjulu Sunkar,Jim Leebens-Mack,Todd C. Mockler,Jeffrey L. Bennetzen,Michael Freeling,David Sankoff,Andrew H. Paterson,Xin-Guang Zhu,Xiaohan Yang,J. Andrew C. Smith,John C. Cushman,Robert E. Paull,Qingyi Yu +74 more
TL;DR: The pineapple lineage has transitioned from C3 photosynthesis to CAM, with CAM-related genes exhibiting a diel expression pattern in photosynthetic tissues, providing the first cis-regulatory link between CAM and circadian clock regulation.
Journal ArticleDOI
Origin and evolution of the octoploid strawberry genome.
Patrick P. Edger,Thomas J. Poorten,Robert VanBuren,Michael A. Hardigan,Marivi Colle,Michael R. McKain,Ronald D. Smith,Scott J. Teresi,Andrew D. L. Nelson,Ching Man Wai,Elizabeth I. Alger,Kevin A. Bird,Alan E. Yocca,Nathan Pumplin,Shujun Ou,Gil Ben-Zvi,Avital Brodt,Kobi Baruch,Thomas Swale,Lily Shiue,Charlotte B. Acharya,Glenn S. Cole,Jeffrey P. Mower,Kevin L. Childs,Ning Jiang,Eric Lyons,Michael Freeling,Joshua R. Puzey,Steven J. Knapp +28 more
TL;DR: A near-complete chromosome-scale assembly for cultivated octoploid strawberry (Fragaria × ananassa) is reported and the origin and evolutionary processes that shaped this complex allopolyploid are uncovered, providing a useful resource for genome-wide analyses and molecular breeding.
Journal ArticleDOI
A genome triplication associated with early diversification of the core eudicots
Yuannian Jiao,Jim Leebens-Mack,Saravanaraj Ayyampalayam,John E. Bowers,Michael R. McKain,Joel R. McNeal,Joel R. McNeal,Megan Rolf,Daniel R. Ruzicka,Eric K. Wafula,Norman J. Wickett,Xiaolei Wu,Yong Zhang,Jun Wang,Jun Wang,Yeting Zhang,Eric J. Carpenter,Michael K. Deyholos,Toni M. Kutchan,André S. Chanderbali,Pamela S. Soltis,Dennis W. Stevenson,Richard W. McCombie,J. C. Pires,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Douglas E. Soltis,Claude W. dePamphilis +27 more
TL;DR: The rapid radiation of core eudicot lineages that gave rise to nearly 75% of angiosperm species appears to have occurred coincidentally or shortly following the gamma triplication event.
Journal ArticleDOI
Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity.
Patrick P. Edger,Robert VanBuren,Marivi Colle,Thomas J. Poorten,Ching Man Wai,Chad E. Niederhuth,Elizabeth I. Alger,Shujun Ou,Charlotte B. Acharya,Jie Wang,Pete Callow,Michael R. McKain,Jinghua Shi,Chad Collier,Zhiyong Xiong,Jeffrey P. Mower,Janet P. Slovin,Timo Hytönen,Ning Jiang,Kevin L. Childs,Steven J. Knapp +20 more
TL;DR: A near-complete genome of diploid woodland strawberry (Fragaria vesca) is reported using single-molecule real-time sequencing from Pacific Biosciences and how genome quality impacts commonly used analyses for addressing both fundamental and applied biological questions is demonstrated.