C
Cees Waalwijk
Researcher at Wageningen University and Research Centre
Publications - 116
Citations - 9448
Cees Waalwijk is an academic researcher from Wageningen University and Research Centre. The author has contributed to research in topics: Fusarium & Mycosphaerella graminicola. The author has an hindex of 46, co-authored 114 publications receiving 8417 citations.
Papers
More filters
Journal ArticleDOI
The banana (Musa acuminata) genome and the evolution of monocotyledonous plants
Angélique D'Hont,Jean-Marc Aury,Franc-Christophe Baurens,Françoise Carreel,Olivier Garsmeur,Benjamin Noel,Stéphanie Bocs,Gaëtan Droc,Mathieu Rouard,Corinne Da Silva,Kamel Jabbari,Kamel Jabbari,Kamel Jabbari,Céline Cardi,Julie Poulain,Marlã̈ne Souquet,Karine Labadie,Cyril Jourda,Juliette Lengellé,Marguerite Rodier-Goud,Adriana Alberti,Maria Bernard,Margot Correa,Saravanaraj Ayyampalayam,Michael R. McKain,Jim Leebens-Mack,Diane Burgess,Michael Freeling,Didier Mbéguié-A-Mbéguié,Matthieu Chabannes,Thomas Wicker,Olivier Panaud,Jose Barbosa,E. Hribova,Pat Heslop-Harrison,Rémy Habas,Ronan Rivallan,Philippe Francois,Claire Poiron,Andrzej Kilian,Dheema Burthia,Christophe Jenny,Frédéric Bakry,Spencer Brown,Valentin Guignon,Valentin Guignon,Gert H. J. Kema,Miguel A. Dita,Cees Waalwijk,Steeve Joseph,Anne Dievart,Olivier Jaillon,Olivier Jaillon,Olivier Jaillon,Julie Leclercq,Xavier Argout,Eric Lyons,Ana Maria Rocha de Almeida,Mouna Jeridi,Jaroslav Dolezel,Nicolas Roux,Ange-Marie Risterucci,Jean Weissenbach,Jean Weissenbach,Jean Weissenbach,Manuel Ruiz,Jean-Christophe Glaszmann,Francis Quetier,Nabila Yahiaoui,Patrick Wincker,Patrick Wincker,Patrick Wincker +71 more
TL;DR: This first monocotyledon high-continuity whole-genome sequence reported outside Poales represents an essential bridge for comparative genome analysis in plants and clarifies commelinid-monocotYledon phylogenetic relationships, reveals Poaceae-specific features and has led to the discovery of conserved non-coding sequences predating monocotinoid–eudicotylingon divergence.
Journal ArticleDOI
The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization
Christina A. Cuomo,Ulrich Güldener,Jin-Rong Xu,Frances Trail,B. Gillian Turgeon,Antonio Di Pietro,Jonathan D. Walton,Li-Jun Ma,Scott E. Baker,Martijn Rep,Gerhard Adam,John F. Antoniw,Thomas K. Baldwin,Sarah E. Calvo,Yueh-Long Chang,David DeCaprio,Liane R. Gale,Sante Gnerre,Rubella S. Goswami,Kim E. Hammond-Kosack,Linda J. Harris,Karen Hilburn,John C. Kennell,Scott Kroken,Jon K. Magnuson,Gertrud Mannhaupt,Evan Mauceli,Hans-Werner Mewes,Rudolf Mitterbauer,Gary J. Muehlbauer,Martin Münsterkötter,David R. Nelson,Kerry O'Donnell,Thérèse Ouellet,Weihong Qi,Hadi Quesneville,M. Isabel G. Roncero,Kye Yong Seong,Igor V. Tetko,Martin Urban,Cees Waalwijk,Todd J. Ward,Jiqiang Yao,Bruce W. Birren,H. Corby Kistler,H. Corby Kistler +45 more
TL;DR: The genome of the filamentous fungus Fusarium graminearum, a major pathogen of cultivated cereals, was sequenced and annotated and many highly polymorphic regions contained sets of genes implicated in plant-fungus interactions and were unusually divergent, with higher rates of recombination.
Journal ArticleDOI
Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis
Stephen B. Goodwin,Sarrah Ben M’Barek,Braham Dhillon,Alexander H. J. Wittenberg,Charles F. Crane,James K. Hane,Andrew J Foster,Theo van der Lee,Jane Grimwood,Andrea Aerts,John F. Antoniw,Andy M. Bailey,Burt H. Bluhm,Judith Bowler,James Bristow,Ate van der Burgt,Blondy Canto-Canché,Alice C. L. Churchill,Laura Conde-Ferráez,Hans J. Cools,Pedro M. Coutinho,Michael Csukai,Paramvir S. Dehal,Pierre J. G. M. de Wit,Bruno G. G. Donzelli,Henri van de Geest,Roeland C. H. J. van Ham,Kim E. Hammond-Kosack,Bernard Henrissat,Andrzej Kilian,Adilson Kenji Kobayashi,Edda Koopmann,Yiannis A. I. Kourmpetis,Arnold Kuzniar,Erika Lindquist,Vincent Lombard,Chris Maliepaard,Natália F. Martins,Rahim Mehrabi,Jan P. H. Nap,Alisa Ponomarenko,Jason J. Rudd,Asaf Salamov,Jeremy Schmutz,Henk J. Schouten,Harris Shapiro,Ioannis Stergiopoulos,Stefano F.F. Torriani,Hank Tu,Ronald P. de Vries,Cees Waalwijk,S.B. Ware,Ad Wiebenga,L.H. Zwiers,Richard P. Oliver,Igor V. Grigoriev,Gert H. J. Kema +56 more
TL;DR: The genome of M. graminicola was sequenced completely and found that it contained very few genes for enzymes that break down plant cell walls, which was more similar to endophytes than to pathogens, which may have evolved from endophytic ancestors.
Journal ArticleDOI
Gene Genealogies and AFLP Analyses in the Fusarium oxysporum Complex Identify Monophyletic and Nonmonophyletic Formae Speciales Causing Wilt and Rot Disease
R. P. Baayen,Kerry O'Donnell,Peter J. M. Bonants,Elizabeth Cigelnik,Laurens P. N. M. Kroon,Eugène J. A. Roebroeck,Cees Waalwijk +6 more
TL;DR: Strains in vegetative compatibility groups (VCGs) shared identical sequences and AFLP profiles, supporting the monophyly of the two single-VCG formae speciales, lilii and tulipae, and Parsimony analyses of AFLP fingerprint data supported the gene Genealogy-based phylogram; however, AFLP-based phylogenies were considerably more homoplasious than the gene genealogies.
Journal ArticleDOI
MspI, an isoschizomer of hpaII which cleaves both unmethylated and methylated hpaII sites.
Cees Waalwijk,R.A. Flavell +1 more
TL;DR: MspI, an isoschizomer of HpaII available from New England Biolabs, cleaves DNA irrespective of the presence of a methyl group at the internal C residue of its recognition sequence CCGG.