T
Teri Rambo
Researcher at University of Arizona
Publications - 10
Citations - 4184
Teri Rambo is an academic researcher from University of Arizona. The author has contributed to research in topics: Genome & Synteny. The author has an hindex of 9, co-authored 10 publications receiving 3974 citations. Previous affiliations of Teri Rambo include Clemson University.
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Journal ArticleDOI
The map-based sequence of the rice genome
Takashi Matsumoto,Jianzhong Wu,Hiroyuki Kanamori,Yuichi Katayose,Masaki Fujisawa,Nobukazu Namiki,Hiroshi Mizuno,Kimiko Yamamoto,Baltazar A. Antonio,Tomoya Baba,Katsumi Sakata,Yoshiaki Nagamura,Hiroyoshi Aoki,Koji Arikawa,Kohei Arita,Takahito Bito,Yoshino Chiden,Nahoko Fujitsuka,Rie Fukunaka,Masao Hamada,Chizuko Harada,Akiko Hayashi,Saori Hijishita,Mikiko Honda,Satomi Hosokawa,Yoko Ichikawa,Atsuko Idonuma,Masumi Iijima,Michiko Ikeda,Maiko Ikeno,Kazue Ito,Sachie Ito,Tomoko Ito,Yuichi Ito,Yukiyo Ito,Aki Iwabuchi,Kozue Kamiya,Wataru Karasawa,Kanako Kurita,Satoshi Katagiri,Ari Kikuta,Harumi Kobayashi,Noriko Kobayashi,Kayo Machita,Tomoko Maehara,Masatoshi Masukawa,Tatsumi Mizubayashi,Yoshiyuki Mukai,Hideki Nagasaki,Yuko Nagata,Shinji Naito,Marina Nakashima,Yuko Nakama,Yumi Nakamichi,Mari Nakamura,Ayano Meguro,Manami Negishi,Isamu Ohta,Tomoya Ohta,Masako Okamoto,Nozomi Ono,Shoko Saji,Miyuki Sakaguchi,Kumiko Sakai,Michie Shibata,Takanori Shimokawa,Jianyu Song,Yuka Takazaki,Kimihiro Terasawa,Mika Tsugane,Kumiko Tsuji,Shigenori Ueda,Kazunori Waki,Harumi Yamagata,Mayu Yamamoto,Shinichi Yamamoto,Hiroko Yamane,Shoji Yoshiki,Rie Yoshihara,Kazuko Yukawa,Huisun Zhong,Masahiro Yano,Takuji Sasaki,Qiaoping Yuan,Shu Ouyang,Jia Liu,Kristine Jones,Kristen Gansberger,Kelly Moffat,Jessica Hill,Jayati Bera,Douglas Fadrosh,Shaohua Jin,Shivani Johri,Mary Kim,Larry Overton,Matthew Reardon,Tamara Tsitrin,Hue Vuong,Bruce Weaver,Anne Ciecko,Luke J. Tallon,Jacqueline Jackson,Grace Pai,Susan Van Aken,T. Utterback,Steve Reidmuller,Tamara Feldblyum,Joseph Hsiao,Victoria Zismann,Stacey E. Iobst,Aymeric R. De Vazeille,C. Robin Buell,Kai Ying,Ying Li,Tingting Lu,Y. Huang,Qiang Zhao,Qi Feng,Lei Zhang,Jingjie Zhu,Qijun Weng,Jie Mu,Yiqi Lu,Danlin Fan,Yilei Liu,Jianping Guan,Yujun Zhang,Shuliang Yu,Xiaohui Liu,Yu Zhang,Guofan Hong,Bin Han,Nathalie Choisne,Nadia Demange,Gisela Orjeda,Sylvie Samain,Laurence Cattolico,Eric Pelletier,Arnaud Couloux,Béatrice Segurens,Patrick Wincker,Angélique D'Hont,Claude Scarpelli,Jean Weissenbach,Marcel Salanoubat,Francis Quetier,Yeisoo Yu,Hyeran Kim,Teri Rambo,Jennifer Currie,Kristi Collura,Meizhong Luo,Tae-Jin Yang,Jetty S.S. Ammiraju,Friedrich Engler,Carol Soderlund,Rod A. Wing,Lance E. Palmer,Melissa De La Bastide,Lori Spiegel,Lidia Nascimento,Theresa Zutavern,A. O'Shaughnessy,Sujit Dike,Neilay Dedhia,R. Preston,Vivekanand Balija,W. Richard McCombie,Teh Yuan Chow,Hong-Hwa Chen,Mei-Chu Chung,Ching San Chen,J. F. Shaw,Hong Pang Wu,Kwang-Jen Hsiao,Ya Ting Chao,Mu Kuei Chu,Chia Hsiung Cheng,Ai Ling Hour,Pei Fang Lee,Shu Jen Lin,Yao-Cheng Lin,John Yu Liou,Shu Mei Liu,Yue-Ie C. Hsing,Saurabh Raghuvanshi,Amitabh Mohanty,Arvind K. Bharti,Arvind K. Bharti,Anupama Gaur,Vipin Gupta,Dibyendu Kumar,Vydianathan Ravi,Shubha Vij,Anita Kapur,Parul Khurana,Paramjit Khurana,Jitendra P. Khurana,Akhilesh K. Tyagi,Kishor Gaikwad,Alok Singh,Vivek Dalal,Subodh K. Srivastava,Anupam Dixit,Ajit K. Pal,Irfan Ahmad Ghazi,Mahavir Yadav,A. Pandit,Atul Bhargava,K. Sureshbabu,Kamlesh Batra,Tilak Raj Sharma,Trilochan Mohapatra,Nagendra K. Singh,Joachim Messing,Amy Bronzino Nelson,Galina Fuks,Steve Kavchok,Gladys Keizer,Eric Linton Victor Llaca,Rentao Song,Bahattin Tanyolac,Steve Young,Kim Yul Ho,Jang Ho Hahn,G. Sangsakoo,Apichart Vanavichit,Luiz Anderson Teixeira de Mattos,Paulo Dejalma Zimmer,Gaspar Malone,Odir Antônio Dellagostin,Antonio Costa de Oliveira,Michael W. Bevan,Ian Bancroft,Patrick Minx,Holly Cordum,Richard K. Wilson,Zhukuan Cheng,Weiwei Jin,Jiming Jiang,Sally A. Leong,Hisakazu Iwama,Takashi Gojobori,Takeshi Itoh,Takeshi Itoh,Yoshihito Niimura,Yasuyuki Fujii,Takuya Habara,Hiroaki Sakai,Hiroaki Sakai,Yoshiharu Sato,Gregory Wilson,Kiran Kumar,Susan R. McCouch,Nikoleta Juretic,Douglas R. Hoen,Stephen I. Wright,Richard Bruskiewich,Thomas E. Bureau,Akio Miyao,Hirohiko Hirochika,Tomotaro Nishikawa,Koh Ichi Kadowaki,Masahiro Sugiura,Benjamin Burr +265 more
TL;DR: A map-based, finished quality sequence that covers 95% of the 389 Mb rice genome, including virtually all of the euchromatin and two complete centromeres, and finds evidence for widespread and recurrent gene transfer from the organelles to the nuclear chromosomes.
Journal ArticleDOI
In-depth view of structure, activity, and evolution of rice chromosome 10
Yeisoo Yu,Teri Rambo,Jennifer Currie,Christopher A. Saski,H. R. Kim,Kristi Collura,S. Thompson,J. Simmons,Tae-Jin Yang,G. Nah,Ami Patel,S. Thurmond,David C Henry,R. Oates,Michael Palmer,Gina L Pries,J. Gibson,H. Anderson,M. Paradkar,L. Crane,J. Dale,M. B. Carver,Todd C. Wood,David Frisch,F. Engler,F. Engler,Carol Soderlund,Carol Soderlund,Lance E. Palmer,L. Tetylman,Lidia Nascimento,M. de la Bastide,Lori Spiegel,Doreen Ware,A. O'Shaughnessy,Sujit Dike,Neilay Dedhia,R. Preston,E. Huang,K. Ferraro,K. Kuit,B. Miller,Theresa Zutavern,F. Katzenberger,Stephanie Muller,Vivekanand Balija,Robert A. Martienssen,Lincoln Stein,Patrick Minx,David W. Johnson,Holly Cordum,Elaine R. Mardis,Zhukuan Cheng,Jiming Jiang,Richard K. Wilson,W. R. McCombie,Rod A. Wing,Q. Yuan,Q. Yuan,S. Ouyang,S. Ouyang,Jaime Liu,Jaime Liu,K. M. Jones,K. M. Jones,K. Gansberger,K. Gansberger,K. Moffat,K. Moffat,J. Hill,J. Hill,T. Tsitrin,T. Tsitrin,L. Overton,L. Overton,J. Bera,J. Bera,M. Kim,M. Kim,Sheng Chih Jin,Sheng Chih Jin,L. Tallon,L. Tallon,A. Ciecko,A. Ciecko,G. Pai,G. Pai,S. van Aken,S. van Aken,T. Utterback,T. Utterback,S. Reidmuller,S. Reidmuller,J. Bormann,J. Bormann,T. Feldblyum,T. Feldblyum,J. Hsiao,J. Hsiao,V. Zismann,V. Zismann,S. Blunt,S. Blunt,A. de Vazeilles,A. de Vazeilles,T. Shaffer,T. Shaffer,H. Koo,H. Koo,B. Suh,B. Suh,Q. Yang,Q. Yang,B. Haas,B. Haas,J. Peterson,J. Peterson,Mihaela Pertea,Mihaela Pertea,N. Volfovsky,N. Volfovsky,N. Volfovsky,J. Wortman,J. Wortman,O. White,O. White,Steven L. Salzberg,Steven L. Salzberg,Steven L. Salzberg,Claire M. Fraser,Claire M. Fraser,C. Robin Buell,Joachim Messing,Rentao Song,Galina Fuks,Victor Llaca,S. Kovchak,S. Young,John E. Bowers,Andrew H. Paterson,M. A. Johns,L. Mao,H. Pan,Ralph A. Dean +143 more
TL;DR: In this article, the authors report the sequence of chromosome 10, the smallest of the 12 rice chromosomes (22.4 megabases), which contains 3471 genes and multiple insertions from organellar genomes were detected.
Journal ArticleDOI
The sequence of rice chromosomes 11 and 12, rich in disease resistance genes and recent gene duplications.
Nathalie Choisne,Nadia Demange,Gisela Orjeda,Sylvie Samain,Angélique D'Hont,Laurence Cattolico,Eric Pelletier,Arnaud Couloux,Béatrice Segurens,Patrick Wincker,Claude Scarpelli,Jean Weissenbach,Marcel Salanoubat,Nagendra K. Singh,Trilochan Mohapatra,Tilak Raj Sharma,Kishor Gaikwad,Alok Singh,Vivek Dalal,Subodh K. Srivastava,Anupam Dixit,Ajit K. Pal,Irfan Ahmad Ghazi,Mahavir Yadav,Awadhesh Pandit,Ashutosh Bhargava,K. Sureshbabu,Rekha Dixit,Harvinder Singh,Suresh C. Swain,Sumita Pal,M. Ragiba,Pradeep K. Singh,Vibha Singhal,Sangeeta D. Mendiratta,Kamlesh Batra,Saurabh Raghuvanshi,Amitabh Mohanty,Arvind K. Bharti,Anupama Gaur,Vikrant Gupta,Dibyendu Kumar,Ravi Vydianathan,Shuba Vij,Anita Kapur,Parul Khurana,Sulabha Sharma,Paramjit Khurana,Jitendra P. Khurana,Akhilesh K. Tyagi,Qiaoping Yuan,Shu Ouyang,Jia Liu,Wei Zhu,Aihui Wang,Haining Lin,John P. Hamilton,Brian J. Haas,Jennifer R. Wortman,Kristine Jones,Mary Kim,Larry Overton,Tamara Tsitrin,Douglas Fadrosh,Jayati Bera,Bruce Weaver,Shaohua Jin,Shivani Johri,Matt Reardon,Hue Vuong,Luke J. Tallon,Susan Van Aken,Matthew R. Lewis,Teresa Utterback,Tamara Feldblyum,Victoria Zismann,Stacey E. Iobst,Joseph Hsiao,Aymeric R. De Vazeille,Steven L. Salzberg,Owen White,Claire M. Fraser,C. Robin Buell,Yeisoo Yu,Teri Rambo,Jennifer Currie,Kristi Collura,Hyeran Kim,Diana Stum,Wenming Wang,Dave Kudrna,Christopher Mueller,Rod A. Wing,Melissa Kramer,Lori Spiegel,Lidia Nascimento,R. Preston,Theresa Zutavern,Joachim Messing +98 more
TL;DR: Based on syntenic alignments of these chromosomes, rice chromosome 11 and 12 do not appear to have resulted from a single whole-genome duplication event as previously suggested.
Journal ArticleDOI
Dynamic Evolution of Oryza Genomes Is Revealed by Comparative Genomic Analysis of a Genus-Wide Vertical Data Set
Jetty S.S. Ammiraju,Fei Lu,Abhijit Sanyal,Yeisoo Yu,Xiang Song,Ning Jiang,Ana Clara Pontaroli,Teri Rambo,Jennifer Currie,Kristi Collura,Jayson Talag,Chuanzhu Fan,Jose Luis Goicoechea,Andrea Zuccolo,JIngfeng Chen,Jeffrey L. Bennetzen,Mingsheng Chen,Scott A. Jackson,Rod A. Wing +18 more
TL;DR: This analysis sequenced and compared nine orthologous genomic regions encompassing the Adh1-Adh2 genes (from six diploid genome types) with the rice reference sequence and revealed the architectural complexities and dynamic evolution of this region over the past ∼15 million years.
Journal ArticleDOI
Sequence, annotation, and analysis of synteny between rice chromosome 3 and diverged grass species
C. Robin Buell,W. Richard McCombie,Rod A. Wing,Rod A. Wing,Qiaoping Yuan,Shu Ouyang,Jia Liu,Wei Zhu,Aihui Wang,Rama Maiti,Brian J. Haas,Jennifer R. Wortman,Mihaela Pertea,Kristine Jones,Mary Kim,Larry Overton,Tamara Tsitrin,Douglas Fadrosh,Jayati Bera,Jayati Weaver,Shaohua Jin,Shivani Johri,Matt Reardon,Kristen Webb,Jessica Hill,Kelly Moffat,Luke J. Tallon,Susan Van Aken,Matthew R. Lewis,Teresa Utterback,Tamara Feldblyum,Victoria Zismann,Stacey E. Iobst,Joseph Hsiao,Aymeric R. De Vazeille,Steven L. Salzberg,Owen White,Claire M. Fraser,Yeisoo Yu,Yeisoo Yu,Hey Ran Kim,Hey Ran Kim,Teri Rambo,Teri Rambo,Jennifer Currie,Jennifer Currie,Kristi Collura,Kristi Collura,Shelly Kernodle-Thompson,Shelly Kernodle-Thompson,Fusheng Wei,David Kudrna,Jetty S.S. Ammiraju,Meizhong Luo,Meizhong Luo,Jos Luis Goicoechea,Jos Luis Goicoechea,David C Henry,Ryan Oates,Michael Palmer,Gina L Pries,Christopher A. Saski,Jessica Simmons,Carol Soderlund,William Nelson,Melissa De La Bastide,Lori Spiegel,Lidia Nascimento,Emily P. Huang,R. Preston,Theresa Zutavern,Lance E. Palmer,Andrew O'haughnessy,Sujit Dike,Patrick Minx,Holly Cordum,Richard K. Wilson,Weiwei Jin,Hye-Ran Lee,Jiming Jiang,Scott A. Jackson +80 more
TL;DR: Synteny between rice and other cereals using an integrated maize physical map and wheat genetic map was strikingly high, further supporting the use of rice and, in particular, chromosome 3, as a model for comparative studies among the cereals.