Commonwealth Scientific and Industrial Research Organisation

About: Commonwealth Scientific and Industrial Research Organisation is a government organization based out in Canberra, Australian Capital Territory, Australia. It is known for research contribution in the topics: Population & Soil water. The organization has 33765 authors who have published 79910 publications receiving 3356114 citations.

Stomatal control by chemical signalling and the exploitation of this mechanism to increase water use efficiency in agriculture

Abstract: Stomatal behaviour of plants in drying soil can be regulated by (long distance) chemical signals that provide the shoot with some measure of water availability. Although much emphasis has been placed on the plant hormone abscisic acid (ABA) as a central component of the signalling process, soil drying will modify the delivery to the shoot of a range of potential chemical signals. Here we consider the role that changes in the xylem sap pH might play in determining the access that ABA has to sites of action on the guard cells. We also show how redistribution of inorganic ions between different compartments in the leaf (localized chemical signalling) can provide sensitive control of stomata and water loss in response to potentially damaging changes in leaf temperature. Partial root zone drying is an irrigation technique that has been developed to allow exploitation of the plant's long distance signalling system. When the system is optimized, stomatal behaviour, shoot water status and leaf growth can be regulated such that water use efficiency (fruit yield/water used) can be significantly increased. We show how an understanding of the drought stress physiology of the whole plant can lead to substantial saving of irrigation water in agriculture.

First-principles calculations of the phase stability of TiO 2

Abstract: First-principles calculations of the crystal structures, bulk moduli, and relative stabilities of seven known and hypothetical ${\mathrm{TiO}}_{2}$ polymorphs (anatase, rutile, columbite, baddeleyite, cotunnite, pyrite, and fluorite structures) have been carried out with the all-electron linear combination of atomic orbitals (LCAO) and pseudopotential planewave (PW) methods. The anatase versus rutile relative phase stability at 0 K and zero pressure has been investigated using high-quality basis sets and carefully controlled computational parameters. From the optimal crystal structures obtained with the Hartree-Fock theory at various pressures, the bulk modulus and phase transition pressures of various high-pressure polymorphs have been derived at the athermal limit. In most cases, the calculated unit cell data agree to within 2% of the corresponding experimental determination. Complete predicted structural data (unit cell constants and fractional atomic coordinates) are presented for the baddeleyite and pyrite forms. The calculated bulk moduli are within 10% of the most reliable experimental results. Both the all-electron LCAO and pseudopotential PW methods predict anatase to be more stable than rutile at 0 K and ambient pressure. The computed anatase-columbite, rutile-columbite, columbite-baddeleyite, and baddeleyite-cotunnite phase transitions appear in the same order as observed in experiments, and the transition pressures agree semiquantitatively with those measured. The pyrite and fluorite structures are predicted to be less stable than other polymorphs at pressures below 70 GPa in agreement with experiments. Finally, the elastic properties, compressibilities and phase transformations of the various polymorphs are discussed in terms of simple models based on the behavior of the constituent Ti-O polyhedra under compression.

AtALMT1, which encodes a malate transporter, is identified as one of several genes critical for aluminum tolerance in Arabidopsis

Abstract: Aluminum (Al) tolerance in Arabidopsis is a genetically complex trait, yet it is mediated by a single physiological mechanism based on Al-activated root malate efflux. We investigated a possible molecular determinant for Al tolerance involving a homolog of the wheat Al-activated malate transporter, ALMT1. This gene, named AtALMT1 (At1g08430), was the best candidate from the 14-memberAtALMT family to be involved with Al tolerance based on expression patterns and genomic location. Physiological analysis of a transferred DNA knockout mutant for AtALMT1 as well as electrophysiological examination of the protein expressed in Xenopus oocytes showed that AtALMT1 is critical for Arabidopsis Al tolerance and encodes the Al-activated root malate efflux transporter associated with tolerance. However, gene expression and sequence analysis of AtALMT1 alleles from tolerant Columbia (Col), sensitive Landsberg erecta (Ler), and other ecotypes that varied in Al tolerance suggested that variation observed at AtALMT1 is not correlated with the differences observed in Al tolerance among these ecotypes. Genetic complementation experiments indicated that the Ler allele of AtALMT1 is equally effective as the Col allele in conferring Al tolerance and Al-activated malate release. Finally, fine-scale mapping of a quantitative trait locus (QTL) for Al tolerance on chromosome 1 indicated that AtALMT1 is located proximal to this QTL. These results indicate that AtALMT1 is an essential factor for Al tolerance in Arabidopsis but does not represent the major Al tolerance QTL also found on chromosome 1.

Report from the in vitro micronucleus assay working group

Abstract: At the Washington International Workshop on Genotoxicity Test Procedures (March 25-26, 1999), the current methodologies and data for the in vitro micronucleus test were reviewed. From this, guidelines for the conduct of specific aspects of the protocol were developed. Because there are a number of important in vitro micronucleus validation studies in progress, it was not possible to design a definitive, internationally harmonized protocol at this time. Agreement was achieved on the following topics: Cells. The choice of cells is flexible, yet the choice of cell type should be justified and take into consideration doubling time, spontaneous frequency of micronuclei, and genetic background. Slide preparation. A fixation method that preserves the cytoplasm and cytoplasmic boundaries, and minimizes clumping should be used. Use of fluorescent DNA-specific dyes is encouraged for better detection of small micronuclei. Analysis. Micronuclei should have a diameter less than one-third of the main nucleus, and should be clearly distinguishable from the main nucleus. In the cytokinesis-block method, binucleated cells selected for analysis should have two clearly distinguishable main nuclei. Cells where the main nucleus(ei) is undergoing apoptosis should not be scored for micronuclei because the assumed micronuclei may have been the result of nuclear fragmentation during the apoptotic process. Toxicity. Cytotoxicity can be measured by various methods including cell growth, cell counts, nucleation (i.e., percent binucleated), division/proliferation index, confluence. A majority of the group recommended that the highest concentration should induce at least 50% cytotoxicity (by whatever measure is selected). Cytochalasin B. There is much debate regarding the use of cytochalasin B. For human lymphocytes, the use of cytochalasin B (6 microg/ml [lymphocytes cultured from whole blood cells] and 3-6 microg/ml [isolated lymphocyte cultures]) is recommended. For cell lines, because there were no definitive data showing a clear advantage or disadvantage of the use of cytochalasin B for a variety of chemicals, the majority opinion of the group was that at this time, the use of cytochalasin B for cell lines is considered optional. Further studies (many chemicals of a variety of potencies, tested both with and without cytochalasin B) are clearly needed to resolve this issue. Number of doses. At least three concentrations should be scored for micronuclei. Treatment/harvest times. At this time, there are not enough data to define the most appropriate treatment/harvest times. Following the principles of the in vitro metaphase assay (with or without metabolic activation), it was agreed that there was a need for a short treatment followed by a recovery time in the absence of test chemical, there was a need for a long treatment (maybe with and without recovery time), and ideally, treatment should cover cells in different cell cycle stages.