Showing papers by "Commonwealth Scientific and Industrial Research Organisation published in 2000"

Global biodiversity scenarios for the year 2100.

Abstract: Scenarios of changes in biodiversity for the year 2100 can now be developed based on scenarios of changes in atmospheric carbon dioxide, climate, vegetation, and land use and the known sensitivity of biodiversity to these changes. This study identified a ranking of the importance of drivers of change, a ranking of the biomes with respect to expected changes, and the major sources of uncertainties. For terrestrial ecosystems, land-use change probably will have the largest effect, followed by climate change, nitrogen deposition, biotic exchange, and elevated carbon dioxide concentration. For freshwater ecosystems, biotic exchange is much more important. Mediterranean climate and grassland ecosystems likely will experience the greatest proportional change in biodiversity because of the substantial influence of all drivers of biodiversity change. Northern temperate ecosystems are estimated to experience the least biodiversity change because major land-use change has already occurred. Plausible changes in biodiversity in other biomes depend on interactions among the causes of biodiversity change. These interactions represent one of the largest uncertainties in projections of future biodiversity change.

Biotic invasions: causes, epidemiology, global consequences, and control

Abstract: Biotic invaders are species that establish a new range in which they proliferate, spread, and persist to the detriment of the environment. They are the most important ecological outcomes from the unprecedented alterations in the distribution of the earth's biota brought about largely through human transport and commerce. In a world without borders, few if any areas remain sheltered from these im- migrations. The fate of immigrants is decidedly mixed. Few survive the hazards of chronic and stochastic forces, and only a small fraction become naturalized. In turn, some naturalized species do become invasive. There are several potential reasons why some immigrant species prosper: some escape from the constraints of their native predators or parasites; others are aided by human-caused disturbance that disrupts native communities. Ironically, many biotic invasions are apparently facilitated by cultivation and husbandry, unintentional actions that foster immigrant populations until they are self-perpetuating and uncontrollable. Whatever the cause, biotic invaders can in many cases inflict enormous environmental damage: (1) Animal invaders can cause extinctions of vulnerable native species through predation, grazing, competition, and habitat alteration. (2) Plant invaders can completely alter the fire regime, nutrient cycling, hydrology, and energy budgets in a native ecosystem and can greatly diminish the abundance or survival of native species. (3) In agriculture, the principal pests of temperate crops are nonindigenous, and the combined expenses of pest control and crop losses constitute an onerous "tax" on food, fiber, and forage production. (4) The global cost of virulent plant and animal diseases caused by parasites transported to new ranges and presented with susceptible new hosts is currently incalculable. Identifying future invaders and taking effective steps to prevent their dispersal and establishment con- stitutes an enormous challenge to both conservation and international commerce. Detection and management when exclusion fails have proved daunting for varied reasons: (1) Efforts to identify general attributes of future invaders have often been inconclusive. (2) Predicting susceptible locales for future invasions seems even more problematic, given the enormous differences in the rates of arrival among potential invaders. (3) Eradication of an established invader is rare, and control efforts vary enormously in their efficacy. Successful control, however, depends more on commitment and continuing diligence than on the efficacy of specific tools themselves. (4) Control of biotic invasions is most effective when it employs a long-term, ecosystem- wide strategy rather than a tactical approach focused on battling individual invaders. (5) Prevention of invasions is much less costly than post-entry control. Revamping national and international quarantine laws by adopting a "guilty until proven innocent" approach would be a productive first step. Failure to address the issue of biotic invasions could effectively result in severe global consequences, including wholesale loss of agricultural, forestry, and fishery resources in some regions, disruption of the ecological processes that supply natural services on which human enterprise depends, and the creation of homogeneous, impoverished ecosystems composed of cosmopolitan species. Given their current scale, biotic invasions have taken their place alongside human-driven atmospheric and oceanic alterations as major agents of global change. Left unchecked, they will influence these other forces in profound but still unpredictable ways.

The in vitro micronucleus technique.

Abstract: The study of DNA damage at the chromosome level is an essential part of genetic toxicology because chromosomal mutation is an important event in carcinogenesis. The micronucleus assays have emerged as one of the preferred methods for assessing chromosome damage because they enable both chromosome loss and chromosome breakage to be measured reliably. Because micronuclei can only be expressed in cells that complete nuclear division a special method was developed that identifies such cells by their binucleate appearance when blocked from performing cytokinesis by cytochalasin-B (Cyt-B), a microfilament-assembly inhibitor. The cytokinesis-block micronucleus (CBMN) assay allows better precision because the data obtained are not confounded by altered cell division kinetics caused by cytotoxicity of agents tested or sub-optimal cell culture conditions. The method is now applied to various cell types for population monitoring of genetic damage, screening of chemicals for genotoxic potential and for specific purposes such as the prediction of the radiosensitivity of tumours and the inter-individual variation in radiosensitivity. In its current basic form the CBMN assay can provide, using simple morphological criteria, the following measures of genotoxicity and cytotoxicity: chromosome breakage, chromosome loss, chromosome rearrangement (nucleoplasmic bridges), cell division inhibition, necrosis and apoptosis. The cytosine-arabinoside modification of the CBMN assay allows for measurement of excision repairable lesions. The use of molecular probes enables chromosome loss to be distinguished from chromosome breakage and importantly non-disjunction in non-micronucleated binucleated cells can be efficiently measured. The in vitro CBMN technique, therefore, provides multiple and complementary measures of genotoxicity and cytotoxicity which can be achieved with relative ease within one system. The basic principles and methods (including detailed scoring criteria for all the genotoxicity and cytotoxicity end-points) of the CBMN assay are described and areas for future development identified.

The Global Carbon Cycle: A Test of Our Knowledge of Earth as a System

Abstract: :Motivated by the rapid increase in atmospheric CO2 due to human activities since the Industrial Revolution, several international scientific research programs have analyzed the role of individual components of the Earth system in the global carbon cycle. Our knowledge of the carbon cycle within the oceans, terrestrial ecosystems, and the atmosphere is sufficiently extensive to permit us to conclude that although natural processes can potentially slow the rate of increase in atmospheric CO 2, there is no natural “savior” waiting to assimilate all the anthropogenically produced CO 2 in the coming century. Our knowledge is insufficient to describe the interactions between the components of the Earth system and the relationship between the carbon cycle and other biogeochemical and climatological processes. Overcoming this limitation requires a systems approach.

Coordinated plant defense responses in Arabidopsis revealed by microarray analysis

Abstract: Disease resistance is associated with a plant defense response that involves an integrated set of signal transduction pathways. Changes in the expression patterns of 2,375 selected genes were examined simultaneously by cDNA microarray analysis in Arabidopsis thaliana after inoculation with an incompatible fungal pathogen Alternaria brassicicola or treatment with the defense-related signaling molecules salicylic acid (SA), methyl jasmonate (MJ), or ethylene. Substantial changes (up- and down-regulation) in the steady-state abundance of 705 mRNAs were observed in response to one or more of the treatments, including known and putative defense-related genes and 106 genes with no previously described function or homology. In leaf tissue inoculated with A. brassicicola, the abundance of 168 mRNAs was increased more than 2.5-fold, whereas that of 39 mRNAs was reduced. Similarly, the abundance of 192, 221, and 55 mRNAs was highly (>2.5-fold) increased after treatment with SA, MJ, and ethylene, respectively. Data analysis revealed a surprising level of coordinated defense responses, including 169 mRNAs regulated by multiple treatments/defense pathways. The largest number of genes coinduced (one of four induced genes) and corepressed was found after treatments with SA and MJ. In addition, 50% of the genes induced by ethylene treatment were also induced by MJ treatment. These results indicated the existence of a substantial network of regulatory interactions and coordination occurring during plant defense among the different defense signaling pathways, notably between the salicylate and jasmonate pathways that were previously thought to act in an antagonistic fashion.

Total silencing by intron-spliced hairpin RNAs

Abstract: Post-transcriptional gene silencing (PTGS), a sequence-specific RNA degradation mechanism inherent in many life-forms, can be induced in plants by transforming them with either antisense1 or co-suppression2 constructs, but typically this results in only a small proportion of silenced individuals. Here we show that gene constructs encoding intron-spliced RNA with a hairpin structure can induce PTGS with almost 100% efficiency when directed against viruses or endogenous genes. These constructs could prove valuable in reverse genetics, genomics, engineering of metabolic pathways and protection against pathogens.

Nipah Virus: A Recently Emergent Deadly Paramyxovirus

Abstract: A paramyxovirus virus termed Nipah virus has been identified as the etiologic agent of an outbreak of severe encephalitis in people with close contact exposure to pigs in Malaysia and Singapore. The outbreak was first noted in late September 1998 and by mid-June 1999, more than 265 encephalitis cases, including 105 deaths, had been reported in Malaysia, and 11 cases of encephalitis or respiratory illness with one death had been reported in Singapore. Electron microscopic, serologic, and genetic studies indicate that this virus belongs to the family Paramyxoviridae and is most closely related to the recently discovered Hendra virus. We suggest that these two viruses are representative of a new genus within the family Paramyxoviridae. Like Hendra virus, Nipah virus is unusual among the paramyxoviruses in its ability to infect and cause potentially fatal disease in a number of host species, including humans.

Indicators of biodiversity for ecologically sustainable forest management

Abstract: The conservation of biological diversity has become one of the important goals of managing for- ests in an ecologically sustainable way. Ecologists and forest resource managers need measures to judge the success or failure of management regimes designed to sustain biological diversity. The relationships between potential indicator species and total biodiversity are not well established. Carefully designed studies are re- quired to test relationships between the presence and abundance of potential indicator species and other taxa and the maintenance of critical ecosystem processes in forests. Other indicators of biological diversity in forests, in addition or as alternatives to indicator species, include what we call structure-based indicators. These are stand-level and landscape-level (spatial) features of forests such as stand structural complexity and plant species composition, connectivity, and heterogeneity. Although the adoption of practices to sustain (or recreate) key characteristics of forest ecosystems appear intuitively sensible and broadly consistent with cur- rent knowledge, information is lacking to determine whether such stand- and landscape-level features of for- ests will serve as successful indices of (and help conserve) biodiversity. Given our limited knowledge of both indicator species and structure-based indicators, we advocate the following four approaches to enhance biodiversity conservation in forests: (1) establish biodiversity priority areas (e.g., reserves) managed prima- rily for the conservation of biological diversity; (2) within production forests, apply structure-based indica- tors including structural complexity, connectivity, and heterogeneity; (3) using multiple conservation strate- gies at multiple spatial scales, spread out risk in wood production forests; and (4) adopt an adaptive management approach to test the validity of structure-based indices of biological diversity by treating man- agement practices as experiments. These approaches would aim to provide new knowledge to managers and improve the effectiveness of current management strategies.

Varroa jacobsoni (Acari: Varroidae) is more than one species

Abstract: Varroa jacobsoni was first described as a natural ectoparasitic mite of the Eastern honeybee (Apis cerana) throughout Asia. It later switched host to the Western honeybee (A. mellifera) and has now become a serious pest of that bee worldwide. The studies reported here on genotypic, phenotypic and reproductive variation among V. jacobsoni infesting A. cerana throughout Asia demonstrate that V. jacobsoni is a complex of at least two different species. In a new classification V. jacobsoni is here redefined as encompassing nine haplotypes (mites with distinct mtDNA CO-I gene sequences) that infest A. cerana in the Malaysia–Indonesia region. Included is a Java haplotype, specimens of which were used to first describe V. jacobsoni at the beginning of this century. A new name, V. destructor n. sp., is given to six haplotypes that infest A. cerana on mainland Asia. Adult females of V. destructor are significantly larger and less spherical in shape than females of V. jacobsoni and they are also reproductively isolated from females of V. jacobsoni. The taxonomic positions of a further three unique haplotypes that infest A. cerana in the Philippines is uncertain and requires further study. Other studies reported here also show that only two of the 18 different haplotypes concealed within the complex of mites infesting A. cerana have become pests of A. mellifera worldwide. Both belong to V. destructor, and they are not V. jacobsoni. The most common is a Korea haplotype, so-called because it was also found parasitizing A. cerana in South Korea. It was identified on A. mellifera in Europe, the Middle East, Africa, Asia, and the Americas. Less common is a Japan/Thailand haplotype, so-called because it was also found parasitizing A. cerana in Japan and Thailand. It was identified on A. mellifera in Japan, Thailand and the Americas. Our results imply that the findings of past research on V. jacobsoni are applicable mostly to V. destructor. Our results will also influence quarantine protocols for bee mites, and may present new strategies for mite control.

Living free radical polymerization with reversible addition : fragmentation chain transfer (the life of RAFT)

Abstract: Free radical polymerization with reversible addition-fragmentation chain transfer (RAFT polymerization) is discussed with a view to answering the following questions: (a) How living is RAFT polymerization? (b) What controls the activity of thiocarbonylthio compounds in RAFT polymeriza- tion? (c) How do rates of polymerization differ from those of conventional radical polymerization? (d) Can RAFT agents be used in emulsion polymerization? Retardation, observed when high concentra- tions of certain RAFT agents are used and in the early stages of emulsion polymerization, and how to overcome it by appropriate choice of reaction conditions, are considered in detail. Examples of the use of thiocarbonylthio RAFT agents in emulsion and miniemulsion polymerization are provided. # 2000 Society of Chemical Industry

Will changes in soil organic carbon act as a positive or negative feedback on global warming

Abstract: The world's soils contain about 1500 Gt of organic carbon to a depth of 1m and a further 900 Gt from 1-2m. A change of total soil organic carbon by just 10% would thus be equivalent to all the anthropogenic CO2 emitted over 30 years. Warming is likely to increase both the rate of decomposition and net primary production (NPP), with a fraction of NPP forming new organic carbon. Evidence from various sources can be used to assess whether NPP or the rate of decomposition has the greater temperature sensitivity, and, hence, whether warming is likely to lead to an increase or decrease in soil organic carbon. Evidence is reviewed from laboratory-based incubations, field measurements of organic carbon storage, carbon isotope ratios and soil respiration with either naturally varying tempera- tures or after experimentally increasing soil temperatures. Estimates of terrestrial carbon stored at the Last Glacial Maximum are also reviewed. The review concludes that the temper- ature dependence of organic matter decomposition can be best described as: d(T) = exp(3.36 (T 40)/(T + 31.79)) where d(T) is the normalised decomposition rate at temperature T (in C). In this equation, decomposition rate is normalised to '1' at 40 C. The review concludes by simulating the likely changes in soil organic carbon with warm- ing. In summary, it appears likely that warming will have the effect of reducing soil organic carbon by stimulating decomposition rates more than NPP. However, increasing CO2 is likely to simultaneously have the effect of increasing soil organic carbon through increases in NPP. Any changes are also likely to be very slow. The net effect of changes in soil organic carbon on atmospheric CO2 loading over the next decades to centuries is, therefore, likely to be small.

Global Warming and Terrestrial Ecosystems: A Conceptual Framework for Analysis

Abstract: raise global mean temperature over the next century by 1.0–3.5 °C (Houghton et al. 1995, 1996). Ecologists from around the world have begun experiments to investigate the effects of global warming on terrestrial ecosystems, the aspect of global climate change that attracts the most public attention (Woodwell and McKenzie 1995, Walker and Steffen 1999). The effort to understand response to warming builds on a history of investigations of the effects of elevated CO 2 on plants and ecosystems (Koch and Mooney 1996, Schulze et al. 1999). There are important differences, however, between increases in atmospheric CO 2 and temperature change, both in the temporal and spatial patterns of change and in how they affect ecosystems. The scientists involved in temperature change research have had to face new technical and conceptual challenges in designing and interpreting their experiments (Schulze et al. 1999). In this paper we describe these challenges and present a conceptual framework for interpreting experimental results and predicting effects of warming on ecosystems.

Selectable traits to increase crop photosynthesis and yield of grain crops

Abstract: The grain yield of cereals has almost doubled this century as a result of genetic manipulation by plant breeding. Surprisingly, there has been no change in the rate of photosynthesis per unit leaf area to accompany these increases. However, total photosynthesis has increased as a result of an increase in leaf area, daily duration of photosynthesis or leaf area duration. There remain substantial opportunities to continue to improve total photosynthesis and crop yield genetically using conventional breeding practices. Selectable traits are discussed here in the context of increasing total above-ground biomass under favourable conditions. Opportunities exist to alter crop duration and the timing of crop development to match it better to radiation, temperature and vapour pressure during crop growth, and to increase the rate of development of early leaf area to achieve rapid canopy closure. The importance of these traits will depend on the environment in which the crop is grown. Increases in crop photosynthesis through breeding are also likely to come via indirect means. Selection for a high and sustained stomatal conductance during the period of stem elongation is one way. Increasing assimilate allocation to the reproductive primordia so as to establish a large potential sink should also indirectly increase total crop photosynthesis. Evidence in the major grain crops suggests that by anthesis the capacity for photosynthesis is high and that photosynthesis is not limiting during grain filling. To use this surplus capacity it is suggested that carbon and nitrogen partitioning to the reproductive meristem be increased so as to establish a high potential grain number and the potential for a large grain size. It is then expected that additional photosynthesis will follow, either by a longer daily duration of photosynthesis or by an extended leaf area duration.

Partitioning of rainfall into throughfall, stemflow and interception: effect of forest type, ground cover and climate.

Abstract: This paper reviews current knowledge of the effect of forest type, ground cover and climate on rainfall partitioning into throughfall, stemflow and interception. It considers the variety and reliability of measurement techniques that have been used and interprets the results of interception studies in relation to methodological, vegetational and climatic factors. The review illustrates that it is difficult to draw general conclusions about interception losses by particular forest types because they almost always depend on the type of rainfall and other meteorological conditions during the study period. Characteristics of a forest that affect interception are not always easy to identify and quantify. Characteristics such as trees/ha, branch angle, the uniformity or lack of uniformity in crown height, the nature and thickness of the bark layer, leaf shape and inclination, and leaf area index will all influence interception. The major difficulty is reliable estimation of throughfall. It is not unusual for measured throughfall to exceed the rainfall value, causing interception to be negative. The difficulty in estimation of throughfall is discussed, while also addressing the need for accurate measurement of rainfall. In forests where stemflow volumes are large enough to significantly influence the interception values, the methodological approach is even more difficult. Measurement of interception on a periodic basis presents fewer problems than estimation on an individual event basis because the variables that affect the values of throughfall and stemflow can change over very short periods, for example the intensity and angle of rainfall, and wind speed and direction. However, carefully conducted event-based studies can quantify the influence of a number of the variables. Copyright © 2000 John Wiley & Sons, Ltd.

A quantitative analysis of fishing impacts on shelf-sea benthos

Abstract: 1. The effects of towed bottom-fishing gear on benthic communities is the subject of heated debate, but the generality of trawl effects with respect to gear and habitat types is poorly understood. To address this deficiency we undertook a meta-analysis of 39 published fishing impact studies. 2. Our analysis shows that inter-tidal dredging and scallop dredging have the greatest initial effects on benthic biota, while trawling has less effect. Fauna in stable gravel, mud and biogenic habitats are more adversely affected than those in less consolidated coarse sediments. 3. Recovery rate appears most rapid in these less physically stable habitats, which are generally inhabited by more opportunistic species. However, defined areas that are fished in excess of three times per year (as occurs in parts of the North Sea and Georges Bank) are likely to be maintained in a permanently altered state. 4. We conclude that intuition about how fishing ought to affect benthic communities is generally supported, but that there are substantial gaps in the available data, which urgently need to be filled. In particular, data on impacts and recovery of epifaunal structure-forming benthic communities are badly needed.

Structure and function of the type 1 insulin-like growth factor receptor.

Abstract: The type 1 insulin-like growth factor receptor (IGF-1R), a transmembrane tyrosine kinase, is widely expressed across many cell types in foetal and postnatal tissues. Activation of the receptor following binding of the secreted growth factor ligands IGF-1 and IGF-2 elicits a repertoire of cellular responses including proliferation, and the protection of cells from programmed cell death or apoptosis. As a result, signalling through the IGF-1R is the principal pathway responsible for somatic growth in foetal mammals, whereas somatic growth in postnatal animals is achieved through the synergistic interaction of growth hormone and the IGFs. Forced overexpression of the IGF-1R results in the malignant transformation of cultured cells; conversely, downregulation of IGF-1R levels can reverse the transformed phenotype of tumour cells, and may render them sensitive to apoptosis in vivo. Elevated levels of IGF-1R are observed in a variety of human tumour types, whereas epidemiological studies implicate the IGF-1 axis as a predisposing factor in the pathogenesis of human breast and prostate cancer. The IGF-1R has thus emerged as a therapeutic target for the development of antitumour agents. Recent progress towards the elucidation of the three-dimensional structure of the extracellular domain of the IGF-1R represents an opportunity for the rational assembly of small molecule antagonists of receptor function for clinical use.

Trends in Extreme Weather and Climate Events: Issues Related to Modeling Extremes in Projections of Future Climate Change

Abstract: Projections of statistical aspects of weather and climate extremes can be derived from climate models representing possible future climate states. Some of the recent models have reproduced results previously reported in the Intergovernmental Panel on Climate Change (IPCC) Second Assessment Report, such as a greater frequency of extreme warm days and lower frequency of extreme cold days associated with a warmer mean climate, a decrease in diurnal temperature range associated with higher nighttime temperatures, increased precipitation intensity, midcontinent summer drying, decreasing daily variability of surface temperature in winter, and increasing variability of northern midlatitude summer surface temperatures. This reconfirmation of previous results gives an increased confidence in the credibility of the models, though agreement among models does not guarantee those changes will occur. New results since the IPCC Second Assessment Report indicate a possible increase of extreme heat stress events in a warm...

Hormonal changes induced by partial rootzone drying of irrigated grapevine

Abstract: Partial rootzone drying (PRD) is a new irrigation technique which improves the water use efficiency (by up to 50%) of wine grape production without significant crop reduction. The technique was developed on the basis of knowledge of the mechanisms controlling transpiration and requires that approximately half of the root system is always maintained in a dry or drying state while the remainder of the root system is irrigated. The wetted and dried sides of the root system are alternated on a 10-14 d cycle. Abscisic acid (ABA) concentration in the drying roots increases 10-fold, but ABA concentration in leaves of grapevines under PRD only increased by 60% compared with a fully irrigated control. Stomatal conductance of vines under PRD irrigation was significantly reduced when compared with vines receiving water to the entire root system. Grapevines from which water was withheld from the entire root system, on the other hand, show a similar reduction in stomatal conductance, but leaf ABA increased 5-fold compared with the fully irrigated control. PRD results in increased xylem sap ABA concentration and increased xylem sap pH, both of which are likely to result in a reduction in stomatal conductance. In addition, there was a reduction in zeatin and zeatin-riboside concentrations in roots, shoot tips and buds of 60, 50 and 70%, respectively, and this may contribute to the reduction in shoot growth and intensified apical dominance of vines under PRD irrigation. There is a nocturnal net flux of water from wetter roots to the roots in dry soil and this may assist in the distribution of chemical signals necessary to sustain the PRD effect. It was concluded that a major effect of PRD is the production of chemical signals in drying roots that are transported to the leaves where they bring about a reduction in stomatal conductance.

The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana

Abstract: Summary To investigate the uptake and long-distance translocation of sulphate in plants, we have characterized three cell-type-specific sulphate transporters, Sultr1;1, Sultr2;1 and Sultr2;2 in Arabidopsis thaliana. Heterologous expression in the yeast sulphate transporter mutant indicated that Sultr1;1 encodes a high-affinity sulphate transporter (Km for sulphate 3.6 ± 0.6 μm), whereas Sultr2;1 and Sultr2;2 encode low-affinity sulphate transporters (Km for sulphate 0.41 ± 0.07 m m and ≥ 1.2 m m, respectively). In Arabidopsis plants expressing the fusion gene construct of the Sultr1;1 promoter and green fluorescent protein (GFP), GFP was localized in the lateral root cap, root hairs, epidermis and cortex of roots. β-glucuronidase (GUS) expressed with the Sultr2;1 promoter was specifically accumulated in the xylem parenchyma cells of roots and leaves, and in the root pericycles and leaf phloem. Expression of the Sultr2;2 promoter–GFP fusion gene showed specific localization of GFP in the root phloem and leaf vascular bundle sheath cells. Plants continuously grown with low sulphate concentrations accumulated high levels of Sultr1;1 and Sultr2;1 mRNA in roots and Sultr2;2 mRNA in leaves. The abundance of Sultr1;1 and Sultr2;1 mRNA was increased remarkably in roots by short-term stress caused by withdrawal of sulphate. Addition of selenate in the sulphate-sufficient medium increased the sulphate uptake capacity, tissue sulphate content and the abundance of Sultr1;1 and Sultr2;1 mRNA in roots. Concomitant decrease of the tissue thiol content after selenate treatment was consistent with the suggested role of glutathione (GSH) as a repressive effector for the expression of sulphate transporter genes.

Novel Photocatalyst: Titania-Coated Magnetite. Activity and Photodissolution

Abstract: Magnetic photocatalysts were synthesized by coating titanium dioxide particles onto colloidal magnetite and nano-magnetite particles. The photoactivity of the prepared coated particles was lower than that of single-phase TiO2 and was found to decrease with an increase in the heat treatment. These observations were explained in terms of an unfavorable heterojunction between the titanium dioxide and the iron oxide core, leading to an increase in electron−hole recombination. Interactions between the iron oxide core and the titanium dioxide matrix upon heat treatment were also seen as a possible cause of the observed low activities of these samples. Other issues considered include the physical and chemical characteristics of the samples, such as surface area and the presence of surface hydroxyl groups. Depending on the calcination conditions, these photocatalysts were found to suffer from varying degrees of photodissolution. Photodissolution tests revealed the greater the extent of the heat treatment, the low...

Design of operational management strategies for achieving fishery ecosystem objectives

Abstract: Ecosystem objectives in fisheries management usually flow from high-level national policies or strategies and international agreements. Consequently they are often broadly stated and hence are difficult to incorporate directly in management plans. Predicting the results of any management action is very uncertain because the dynamics of ecosystems are complex and poorly understood. Methods to design and evaluate operational management strategies have advanced considerably in the past decade. These management-strategy-evaluation (MSE) methods rely on simulation testing of the whole management process using performance measures derived from operational objectives. The MSE approach involves selecting (operational) management objectives, specifying performance measures, specifying alternative management strategies, and evaluating these using simulation. The MSE framework emphasizes the identification and modelling of uncertainties, and propagates these through to their effects on the performance measures. The framework is outlined and illustrated by three ecosystem-related applications: management of benthic habitats and broad fish community composition; by-catch of species of high conservation value; and foodchain interactions and dependencies. Challenges to be overcome before broader ecosystem-related objectives can be fully handled are discussed briefly.

Recent progress toward understanding biosynthesis of the amylopectin crystal.

Abstract: Plant starch granules provide the largest percentage of calories in the human diet. Starch consists almost entirely of the Glc homopolymers amylopectin and amylose. Amylopectin is the major contributor to both mass and granule structure. Because of the very basic role that starch plays in our

Report from the in vitro micronucleus assay working group

Abstract: At the Washington International Workshop on Genotoxicity Test Procedures (March 25-26, 1999), the current methodologies and data for the in vitro micronucleus test were reviewed. From this, guidelines for the conduct of specific aspects of the protocol were developed. Because there are a number of important in vitro micronucleus validation studies in progress, it was not possible to design a definitive, internationally harmonized protocol at this time. Agreement was achieved on the following topics: Cells. The choice of cells is flexible, yet the choice of cell type should be justified and take into consideration doubling time, spontaneous frequency of micronuclei, and genetic background. Slide preparation. A fixation method that preserves the cytoplasm and cytoplasmic boundaries, and minimizes clumping should be used. Use of fluorescent DNA-specific dyes is encouraged for better detection of small micronuclei. Analysis. Micronuclei should have a diameter less than one-third of the main nucleus, and should be clearly distinguishable from the main nucleus. In the cytokinesis-block method, binucleated cells selected for analysis should have two clearly distinguishable main nuclei. Cells where the main nucleus(ei) is undergoing apoptosis should not be scored for micronuclei because the assumed micronuclei may have been the result of nuclear fragmentation during the apoptotic process. Toxicity. Cytotoxicity can be measured by various methods including cell growth, cell counts, nucleation (i.e., percent binucleated), division/proliferation index, confluence. A majority of the group recommended that the highest concentration should induce at least 50% cytotoxicity (by whatever measure is selected). Cytochalasin B. There is much debate regarding the use of cytochalasin B. For human lymphocytes, the use of cytochalasin B (6 microg/ml [lymphocytes cultured from whole blood cells] and 3-6 microg/ml [isolated lymphocyte cultures]) is recommended. For cell lines, because there were no definitive data showing a clear advantage or disadvantage of the use of cytochalasin B for a variety of chemicals, the majority opinion of the group was that at this time, the use of cytochalasin B for cell lines is considered optional. Further studies (many chemicals of a variety of potencies, tested both with and without cytochalasin B) are clearly needed to resolve this issue. Number of doses. At least three concentrations should be scored for micronuclei. Treatment/harvest times. At this time, there are not enough data to define the most appropriate treatment/harvest times. Following the principles of the in vitro metaphase assay (with or without metabolic activation), it was agreed that there was a need for a short treatment followed by a recovery time in the absence of test chemical, there was a need for a long treatment (maybe with and without recovery time), and ideally, treatment should cover cells in different cell cycle stages.

Soil testing for heavy metals.

Abstract: Soil testing for metal contaminants is a continually evolving process aimed at improving the assessment of environmental and human health hazards associated with heavy metals in soils and plants. A number of challenges present themselves before accurate, reliable and precise contaminant hazard assessment criteria for soils and plants can be made. These include: sampling, extraction and analytical obstacles associated with the determination of trace levels of metals in environmental media; quality assurance and quality control issues associated with both extraction and analytical procedures (especially for metals where non‐compliance with regulatory standards may be penalised); and confounding environmental effects (e.g. rooting depth, soil salinity, Eh, pH, plant species, metal species) which limit the usefulness of the relationship between the current tests and actual hazards. These difficulties have combined to produce soil tests for heavy metals often poorly correlated with hazardwhether this ...

Expression and parent-of-origin effects for FIS2, MEA, and FIE in the endosperm and embryo of developing Arabidopsis seeds

Abstract: The promoters of MEA (FIS1), FIS2, and FIE (FIS3), genes that repress seed development in the absence of pollination, were fused to β-glucuronidase (GUS) to study their activity pattern. The FIS2∷GUS product is found in the embryo sac, in each of the polar cell nuclei, and in the central cell nucleus. After pollination, the maternally derived FIS2∷GUS protein occurs in the nuclei of the cenocytic endosperm. Before cellularization of the endosperm, activity is terminated in the micropylar and central nuclei of the endosperm and subsequently in the nuclei of the chalazal cyst. MEA∷GUS has a pattern of activity similar to that of FIS2∷GUS, but FIE∷GUS protein is found in many tissues, including the prepollination embryo sac, and in embryo and endosperm postpollination. The similarity in mutant phenotypes; the activity of FIE, MEA, and FIS2 in the same cells in the embryo sac; and the fact that MEA and FIE proteins interact in a yeast two-hybrid system suggest that these proteins operate in the same system of control of seed development. Maternal and not paternal FIS2∷GUS, MEA∷GUS, and FIE∷GUS show activity in early endosperm, so these genes may be imprinted. When fis2, mea, and fie mutants are pollinated, seed development is arrested at the heart embryo stage. The seed arrest of mea and fis2 is avoided when they are fertilized by a low methylation parent. The wild-type alleles of MEA or FIS2 are not required. The parent-of-origin-determined differential activity of MEA, FIS2, and FIE is not dependent on DNA methylation, but methylation does control some gene(s) that have key roles in seed development.