scispace - formally typeset
Open AccessJournal ArticleDOI

Brain-wide 3D imaging of neuronal activity in Caenorhabditis elegans with sculpted light

Reads0
Chats0
TLDR
A two-photon technique for brain-wide calcium imaging in Caenorhabditis elegans, using wide-field temporal focusing (WF-TeFo) and a nuclear-localized, genetically encoded calcium indicator, NLS-GCaMP5K, that permits unambiguous discrimination of individual neurons within the densely packed head ganglia of C. elegans.
Abstract
Recent efforts in neuroscience research have been aimed at obtaining detailed anatomical neuronal wiring maps as well as information on how neurons in these networks engage in dynamic activities. Although the entire connectivity map of the nervous system of Caenorhabditis elegans has been known for more than 25 years, this knowledge has not been sufficient to predict all functional connections underlying behavior. To approach this goal, we developed a two-photon technique for brain-wide calcium imaging in C. elegans, using wide-field temporal focusing (WF-TeFo). Pivotal to our results was the use of a nuclear-localized, genetically encoded calcium indicator, NLS-GCaMP5K, that permits unambiguous discrimination of individual neurons within the densely packed head ganglia of C. elegans. We demonstrate near-simultaneous recording of activity of up to 70% of all head neurons. In combination with a lab-on-a-chip device for stimulus delivery, this method provides an enabling platform for establishing functional maps of neuronal networks.

read more

Citations
More filters
Journal ArticleDOI

Discovering sparse control strategies in neural activity

TL;DR: In this paper , the authors propose a protocol for systematic perturbation of neural states that limits experimental complexity and could eventually help characterize collective aspects of the neural-behavioral map.
Journal ArticleDOI

Image improvement of temporal focusing multiphoton microscopy via superior spatial modulation excitation and Hilbert–Huang transform decomposition

TL;DR: In this article , a general and comprehensive numerical model of TFMPEM utilizing Fourier optics was constructed and simulations were performed to determine the superior spatial frequency and orientation of the structured pattern which maximize the axial excitation confinement.
Journal ArticleDOI

Emergent dynamics in a robotic model based on the Caenorhabditis elegans connectome

TL;DR: In this article , the authors analyze the neural dynamics and their relation with the emergent actions of a robotic vehicle that is controlled by a neural network numerical simulation based on the nervous system of the nematode Caenorhabditis elegans.
Journal ArticleDOI

Deep learning-based virtual refocusing of images using an engineered point-spread function.

TL;DR: In this paper, a virtual image refocusing method over an extended depth of field (DOF) enabled by cascaded neural networks and a double-helix point spread function (DH-PSF) is presented.
Dissertation

Dissection of Complex Behavior and Whole-Brain Functional Mapping in Larval Zebrafish

Xiuye Chen
TL;DR: It is discovered that turning properties in larval zebrafish are distinctly modulated by temporal step functions in light intensity in combination with the specific motor history preceding these turns.
References
More filters
Journal ArticleDOI

The structure of the nervous system of the nematode Caenorhabditis elegans

TL;DR: The structure and connectivity of the nervous system of the nematode Caenorhabditis elegans has been deduced from reconstructions of electron micrographs of serial sections as discussed by the authors.
Journal ArticleDOI

Ultrasensitive fluorescent proteins for imaging neuronal activity.

TL;DR: A family of ultrasensitive protein calcium sensors (GCaMP6) that outperformed other sensors in cultured neurons and in zebrafish, flies and mice in vivo are developed and provide new windows into the organization and dynamics of neural circuits over multiple spatial and temporal scales.
Journal ArticleDOI

Functional network organization of the human brain

TL;DR: In this article, the authors studied functional brain organization in healthy adults using resting state functional connectivity MRI and proposed two novel brain wide graphs, one of 264 putative functional areas, the other a modification of voxelwise networks that eliminates potentially artificial short-distance relationships.
Journal ArticleDOI

Measurement of current-voltage relations in the membrane of the giant axon of Loligo.

TL;DR: The importance of ionic movements in excitable tissues has been emphasized by a number of recent experiments which are consistent with the theory that nervous conduction depends on a specific increase in permeability which allows sodium ions to move from the more concentrated solution outside a nerve fibre to the more dilute solution inside it.
Journal ArticleDOI

Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy.

TL;DR: This work developed digital scanned laser light sheet fluorescence microscopy and recorded nuclei localization and movement in entire wild-type and mutant zebrafish embryos over the first 24 hours of development to derive a model of germ layer formation and show that the mesendoderm forms from one-third of the embryo's cells in a single event.
Related Papers (5)