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Chemistry with ADF

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TLDR
The “Activation‐strain TS interaction” (ATS) model of chemical reactivity is reviewed as a conceptual framework for understanding how activation barriers of various types of reaction mechanisms arise and how they may be controlled, for example, in organic chemistry or homogeneous catalysis.
Abstract
We present the theoretical and technical foundations of the Amsterdam Density Functional (ADF) program with a survey of the characteristics of the code (numerical integration, density fitting for the Coulomb potential, and STO basis functions). Recent developments enhance the efficiency of ADF (e.g., parallelization, near order-N scaling, QM/MM) and its functionality (e.g., NMR chemical shifts, COSMO solvent effects, ZORA relativistic method, excitation energies, frequency-dependent (hyper)polarizabilities, atomic VDD charges). In the Applications section we discuss the physical model of the electronic structure and the chemical bond, i.e., the Kohn–Sham molecular orbital (MO) theory, and illustrate the power of the Kohn–Sham MO model in conjunction with the ADF-typical fragment approach to quantitatively understand and predict chemical phenomena. We review the “Activation-strain TS interaction” (ATS) model of chemical reactivity as a conceptual framework for understanding how activation barriers of various types of (competing) reaction mechanisms arise and how they may be controlled, for example, in organic chemistry or homogeneous catalysis. Finally, we include a brief discussion of exemplary applications in the field of biochemistry (structure and bonding of DNA) and of time-dependent density functional theory (TDDFT) to indicate how this development further reinforces the ADF tools for the analysis of chemical phenomena. © 2001 John Wiley & Sons, Inc. J Comput Chem 22: 931–967, 2001

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Citations
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Journal ArticleDOI

The structure of layered covalent-organic frameworks

TL;DR: It is shown that the stacking of 2D COFs are considerably more stable if their stacking arrangement is either serrated or inclined, and layers are shifted with respect to each other by ~1.4 Å compared with perfect AA stacking.
Journal ArticleDOI

Towards understanding the poor thermal stability of V5+ electrolyte solution in Vanadium Redox Flow Batteries

TL;DR: In this article, the V5+ electrolyte solution from Vanadium Redox Flow Batteries was studied by variable temperature O-17 and V-51 NMR spectroscopy and density functional theory (DFT) based computational modeling.
Journal ArticleDOI

Density Functional Study of Benzene Adsorption on Pt(111)

TL;DR: In this paper, the adsorption of benzene on Pt(111) was analyzed using first-principles density functional theoretical cluster and periodic slab calculations, and it was shown that the most important sites for low coverage are the bridge(30) and the hollow(0) sites.
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Electronic Properties of N-Heterocyclic Carbene (NHC) Ligands: Synthetic, Structural, and Spectroscopic Studies of (NHC)Platinum(II) Complexes

TL;DR: In this article, it was shown that saturated NHC (SIPr and SIMes) are more efficient π back-acceptors than their unsaturated NHC congeners (IPr, IMes), and that the synergistic effect between π donation and σ donation present in the saturated nHC systems results in increased electron density at the platinum center compared to the bonding situation in the un...
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Analytical second derivatives in the Amsterdam density functional package

TL;DR: In this article, analytical second derivatives with respect to nuclear coordinates have been implemented in the Amsterdam density functional (ADF) package and a detailed formalism of that implementation is presented.
References
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Journal ArticleDOI

Density‐functional thermochemistry. III. The role of exact exchange

TL;DR: In this article, a semi-empirical exchange correlation functional with local spin density, gradient, and exact exchange terms was proposed. But this functional performed significantly better than previous functionals with gradient corrections only, and fits experimental atomization energies with an impressively small average absolute deviation of 2.4 kcal/mol.
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Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density

TL;DR: Numerical calculations on a number of atoms, positive ions, and molecules, of both open- and closed-shell type, show that density-functional formulas for the correlation energy and correlation potential give correlation energies within a few percent.
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Self-Consistent Equations Including Exchange and Correlation Effects

TL;DR: In this paper, the Hartree and Hartree-Fock equations are applied to a uniform electron gas, where the exchange and correlation portions of the chemical potential of the gas are used as additional effective potentials.
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Density-functional exchange-energy approximation with correct asymptotic behavior.

TL;DR: This work reports a gradient-corrected exchange-energy functional, containing only one parameter, that fits the exact Hartree-Fock exchange energies of a wide variety of atomic systems with remarkable accuracy, surpassing the performance of previous functionals containing two parameters or more.
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Atoms, molecules, solids, and surfaces: Applications of the generalized gradient approximation for exchange and correlation.

TL;DR: A way is found to visualize and understand the nonlocality of exchange and correlation, its origins, and its physical effects as well as significant interconfigurational and interterm errors remain.
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