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Chemistry with ADF

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TLDR
The “Activation‐strain TS interaction” (ATS) model of chemical reactivity is reviewed as a conceptual framework for understanding how activation barriers of various types of reaction mechanisms arise and how they may be controlled, for example, in organic chemistry or homogeneous catalysis.
Abstract
We present the theoretical and technical foundations of the Amsterdam Density Functional (ADF) program with a survey of the characteristics of the code (numerical integration, density fitting for the Coulomb potential, and STO basis functions). Recent developments enhance the efficiency of ADF (e.g., parallelization, near order-N scaling, QM/MM) and its functionality (e.g., NMR chemical shifts, COSMO solvent effects, ZORA relativistic method, excitation energies, frequency-dependent (hyper)polarizabilities, atomic VDD charges). In the Applications section we discuss the physical model of the electronic structure and the chemical bond, i.e., the Kohn–Sham molecular orbital (MO) theory, and illustrate the power of the Kohn–Sham MO model in conjunction with the ADF-typical fragment approach to quantitatively understand and predict chemical phenomena. We review the “Activation-strain TS interaction” (ATS) model of chemical reactivity as a conceptual framework for understanding how activation barriers of various types of (competing) reaction mechanisms arise and how they may be controlled, for example, in organic chemistry or homogeneous catalysis. Finally, we include a brief discussion of exemplary applications in the field of biochemistry (structure and bonding of DNA) and of time-dependent density functional theory (TDDFT) to indicate how this development further reinforces the ADF tools for the analysis of chemical phenomena. © 2001 John Wiley & Sons, Inc. J Comput Chem 22: 931–967, 2001

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The M06 suite of density functionals for main group thermochemistry, thermochemical kinetics, noncovalent interactions, excited states, and transition elements: two new functionals and systematic testing of four M06-class functionals and 12 other functionals

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Quantum mechanical continuum solvation models.

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cclib: A library for package‐independent computational chemistry algorithms

TL;DR: The cclib platform as discussed by the authors is a platform for the development of package-independent computational chemistry algorithms, which can automatically detect, parse, and convert the extracted information into a standard internal representation.
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A new local density functional for main-group thermochemistry, transition metal bonding, thermochemical kinetics, and noncovalent interactions.

TL;DR: The new local density functional, called M06-L, is designed to capture the main dependence of the exchange-correlation energy on local spin density, spin density gradient, and spin kinetic energy density, and it is parametrized to satisfy the uniform-electron-gas limit.
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Science and technology roadmap for graphene, related two-dimensional crystals, and hybrid systems

Andrea C. Ferrari, +68 more
- 04 Mar 2015 - 
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References
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Journal ArticleDOI

Propargyl from the reaction of singlet methylene with acetylene

TL;DR: In this paper, the authors used infrared kinetic spectroscopy to study the production of propargyl radical from the reaction of singlet methylene with acetylene, and the rate constant for this product channel was determined to be (3.5 ± 0.7) × 10-10 cm3 molecule-1 s-1 at 295 K.
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Gas-Phase Bond Strength and Atomic Connectivity Studies of the Unsymmetrical Two-Center Three-Electron Ion, [Et2S∴SMe2]+

TL;DR: In this article, a computational and experimental study of the unsymmetrical 2c−3e bond in [Et2S∴SMe2]+ is presented.
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A combined QM/MM study of ligand substitution enthalpies in the L2Fe(CO)3, RuCpL2Cl, and RuCp*L2Cl systems

TL;DR: In this paper, a combined density functional and molecular mechanics approach (QM/MM) has been validated in a study of the substitution reactions: (i) (PH3)2Fe(CO)3 + 2ER3 ⇆ (ER3) + 2PH3(ER3 = PMe3, PEt3,...
Journal ArticleDOI

Exploring chromium (VI) dioxodihalides chemistry: Is density functional theory the most suitable tool?

TL;DR: In this article, a comparative study of the CrO2F2 compound has been performed using different conventional ab initio methodologies and density functional procedures and two points have been analyzed: first, the accuracy of results yielded by each method under study, and second, the computational cost required to reach such results.
Journal ArticleDOI

A new expansion of the Coulomb interaction

TL;DR: In this article, an expansion for the Coulomb 1/r 12 interaction was derived, which converges for all r 1 and r 2, and allows the long-range component of the total Coulomb energy of a system to be written as an infinite series involving the system's multipole moments.
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