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Open AccessJournal ArticleDOI

Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization

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TLDR
A comprehensive catalog of yeast genes whose transcript levels vary periodically within the cell cycle is created, and it is found that the mRNA levels of more than half of these 800 genes respond to one or both of these cyclins.
Abstract
We sought to create a comprehensive catalog of yeast genes whose transcript levels vary periodically within the cell cycle. To this end, we used DNA microarrays and samples from yeast cultures sync...

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Citations
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Journal ArticleDOI

EMVS: The EM Approach to Bayesian Variable Selection

TL;DR: EMVS is proposed, a deterministic alternative to stochastic search based on an EM algorithm which exploits a conjugate mixture prior formulation to quickly find posterior modes in high-dimensional linear regression contexts.
Journal ArticleDOI

Large-scale identification of secreted and membrane-associated gene products using DNA microarrays.

TL;DR: A rapid and efficient method for identifying genes that encode secreted or membrane proteins is described and over 275 human genes and 285 yeast genes that are likely to encode previously unrecognized secreted and membrane proteins are identified.
Journal ArticleDOI

Opiate-like effects of sugar on gene expression in reward areas of the rat brain.

TL;DR: A major role for the nucleus accumbens in mediating the effects of naturally rewarding substances is supported and an animal model for studying the common substrates of drug addiction and eating disorders is extended.
Journal ArticleDOI

Magic bullets for protein kinases

TL;DR: Kinase-sensitization has been used systematically to generate and analyze conditional alleles of several yeast protein kinases in vivo to generate selective inhibitors of mutant Src-family kinases and Ca(2+)/calmodulin-dependent kinases.
Journal Article

A Practical Approach to Optical Cross-Reactive Sensor Arrays

TL;DR: This critical review provides a simplified version of the chemometric procedures involved in realizing a successful analytical experiment that utilizes cross-reactive optical sensor arrays, and summarizes the current research in this field.
References
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Journal ArticleDOI

Cluster analysis and display of genome-wide expression patterns

TL;DR: A system of cluster analysis for genome-wide expression data from DNA microarray hybridization is described that uses standard statistical algorithms to arrange genes according to similarity in pattern of gene expression, finding in the budding yeast Saccharomyces cerevisiae that clustering gene expression data groups together efficiently genes of known similar function.
Journal ArticleDOI

Real time quantitative PCR.

TL;DR: Unlike other quantitative PCR methods, real-time PCR does not require post-PCR sample handling, preventing potential PCR product carry-over contamination and resulting in much faster and higher throughput assays.
Journal ArticleDOI

Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

TL;DR: DNA microarrays containing virtually every gene of Saccharomyces cerevisiae were used to carry out a comprehensive investigation of the temporal program of gene expression accompanying the metabolic shift from fermentation to respiration, and the expression patterns of many previously uncharacterized genes provided clues to their possible functions.
Book ChapterDOI

Getting started with yeast.

TL;DR: The yeast Saccharomyces cerevisiae is now recognized as a model system representing a simple eukaryote whose genome can be easily manipulated and made particularly accessible to gene cloning and genetic engineering techniques.
Journal ArticleDOI

A Genome-Wide Transcriptional Analysis of the Mitotic Cell Cycle

TL;DR: The genome-wide characterization of mRNA transcript levels during the cell cycle of the budding yeast S. cerevisiae indicates a mechanism for local chromosomal organization in global mRNA regulation and links a range of human genes to cell cycle period-specific biological functions.
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