scispace - formally typeset
Open AccessJournal ArticleDOI

Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization

Reads0
Chats0
TLDR
A comprehensive catalog of yeast genes whose transcript levels vary periodically within the cell cycle is created, and it is found that the mRNA levels of more than half of these 800 genes respond to one or both of these cyclins.
Abstract
We sought to create a comprehensive catalog of yeast genes whose transcript levels vary periodically within the cell cycle. To this end, we used DNA microarrays and samples from yeast cultures sync...

read more

Citations
More filters
Proceedings Article

Data analysis with bayesian networks: a bootstrap approach

TL;DR: This paper proposes Efron's Bootstrap as a computationally efficient approach for answering confidence measures on features of Bayesian networks, and proposes to use these confidence measures to induce better structures from the data, and to detect the presence of latent variables.
Journal ArticleDOI

Genome-wide discovery of transcriptional modules from DNA sequence and gene expression.

TL;DR: The EM algorithm is used to identify transcriptional modules--sets of genes that are co-regulated in a set of experiments, through a common motif profile, and refines both the module assignment and the motif profile so as to best explain the expression data as a function of transcriptional motifs.
Journal ArticleDOI

Features and functions of covalently linked proteins in fungal cell walls.

TL;DR: Evidence is presented that the cell wall of mycelial species of the Ascomycotina is similarly organized and contains glycoproteins with comparable functions.
Journal ArticleDOI

Growth control of the eukaryote cell: a systems biology study in yeast

TL;DR: This work constitutes a first comprehensive systems biology study on growth-rate control in the eukaryotic cell and has direct implications for advanced studies on cell growth, in vivo regulation of metabolic fluxes for comprehensive metabolic engineering, and for the design of genome-scale systems biology models of the eUKaryoticcell.
References
More filters
Journal ArticleDOI

Cluster analysis and display of genome-wide expression patterns

TL;DR: A system of cluster analysis for genome-wide expression data from DNA microarray hybridization is described that uses standard statistical algorithms to arrange genes according to similarity in pattern of gene expression, finding in the budding yeast Saccharomyces cerevisiae that clustering gene expression data groups together efficiently genes of known similar function.
Journal ArticleDOI

Real time quantitative PCR.

TL;DR: Unlike other quantitative PCR methods, real-time PCR does not require post-PCR sample handling, preventing potential PCR product carry-over contamination and resulting in much faster and higher throughput assays.
Journal ArticleDOI

Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

TL;DR: DNA microarrays containing virtually every gene of Saccharomyces cerevisiae were used to carry out a comprehensive investigation of the temporal program of gene expression accompanying the metabolic shift from fermentation to respiration, and the expression patterns of many previously uncharacterized genes provided clues to their possible functions.
Book ChapterDOI

Getting started with yeast.

TL;DR: The yeast Saccharomyces cerevisiae is now recognized as a model system representing a simple eukaryote whose genome can be easily manipulated and made particularly accessible to gene cloning and genetic engineering techniques.
Journal ArticleDOI

A Genome-Wide Transcriptional Analysis of the Mitotic Cell Cycle

TL;DR: The genome-wide characterization of mRNA transcript levels during the cell cycle of the budding yeast S. cerevisiae indicates a mechanism for local chromosomal organization in global mRNA regulation and links a range of human genes to cell cycle period-specific biological functions.
Related Papers (5)