scispace - formally typeset
Open AccessJournal ArticleDOI

Comprehensive Identification of Cell Cycle–regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization

Reads0
Chats0
TLDR
A comprehensive catalog of yeast genes whose transcript levels vary periodically within the cell cycle is created, and it is found that the mRNA levels of more than half of these 800 genes respond to one or both of these cyclins.
Abstract
We sought to create a comprehensive catalog of yeast genes whose transcript levels vary periodically within the cell cycle. To this end, we used DNA microarrays and samples from yeast cultures sync...

read more

Citations
More filters
Journal ArticleDOI

Rich probabilistic models for gene expression.

TL;DR: A novel functionality that falls naturally out of the framework is demonstrated: predicting the "cluster" of the array resulting from a gene mutation based only on the gene's expression pattern in the context of other mutations.
Journal ArticleDOI

A practical approach to optical cross-reactive sensor arrays

TL;DR: In this article, the authors provide a simplified version of the chemometric procedures involved in realizing a successful analytical experiment that utilizes cross-reactive optical sensor arrays, and summarizes the current research in this field.
Journal ArticleDOI

Variable Selection in Nonparametric Varying-Coefficient Models for Analysis of Repeated Measurements.

TL;DR: A regularized estimation procedure for variable selection that combines basis function approximations and the smoothly clipped absolute deviation penalty and establishes the theoretical properties of the procedure, including consistency in variable selection and the oracle property in estimation.
Journal ArticleDOI

Using chemometrics for navigating in the large data sets of genomics, proteomics, and metabonomics (gpm)

TL;DR: The applicability of multivariate projection techniques, such as principal-component analysis (PCA) and partial least-squares (PLS) projections to latent structures, to the large-volume high-density data structures obtained within genomics, proteomics, and metabonomics is described.
Proceedings ArticleDOI

OpenOrd: an open-source toolbox for large graph layout

TL;DR: An open-source toolbox for drawing large-scale undirected graphs based on a previously implemented closed-source algorithm known as VxOrd, which is extended by incorporating edge-cutting, a multi-level approach, average-link clustering, and a parallel implementation.
References
More filters
Journal ArticleDOI

Cluster analysis and display of genome-wide expression patterns

TL;DR: A system of cluster analysis for genome-wide expression data from DNA microarray hybridization is described that uses standard statistical algorithms to arrange genes according to similarity in pattern of gene expression, finding in the budding yeast Saccharomyces cerevisiae that clustering gene expression data groups together efficiently genes of known similar function.
Journal ArticleDOI

Real time quantitative PCR.

TL;DR: Unlike other quantitative PCR methods, real-time PCR does not require post-PCR sample handling, preventing potential PCR product carry-over contamination and resulting in much faster and higher throughput assays.
Journal ArticleDOI

Exploring the Metabolic and Genetic Control of Gene Expression on a Genomic Scale

TL;DR: DNA microarrays containing virtually every gene of Saccharomyces cerevisiae were used to carry out a comprehensive investigation of the temporal program of gene expression accompanying the metabolic shift from fermentation to respiration, and the expression patterns of many previously uncharacterized genes provided clues to their possible functions.
Book ChapterDOI

Getting started with yeast.

TL;DR: The yeast Saccharomyces cerevisiae is now recognized as a model system representing a simple eukaryote whose genome can be easily manipulated and made particularly accessible to gene cloning and genetic engineering techniques.
Journal ArticleDOI

A Genome-Wide Transcriptional Analysis of the Mitotic Cell Cycle

TL;DR: The genome-wide characterization of mRNA transcript levels during the cell cycle of the budding yeast S. cerevisiae indicates a mechanism for local chromosomal organization in global mRNA regulation and links a range of human genes to cell cycle period-specific biological functions.
Related Papers (5)