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Draft Genome Sequence of Burkholderia cordobensis Type Strain LMG 27620, Isolated from Agricultural Soils in Argentina.

TLDR
The draft genome sequence of Burkholderia cordobensis type strain LMG 27620, isolated from agricultural soil in Córdoba, Argentina, is reported, which harbors several genes involved in chitin utilization and phenol degradation, which make it an interesting candidate for biocontrol purposes and xenobiotic degradation in polluted environments.
Abstract
Fil: Draghi, Walter Omar. Consejo Nacional de Investigaciones Cientificas y Tecnicas. Oficina de Coordinacion Administrativa Parque Centenario. Instituto de Investigaciones Bioquimicas de Buenos Aires. Fundacion Instituto Leloir. Instituto de Investigaciones Bioquimicas de Buenos Aires; Argentina. Consejo Nacional de Investigaciones Cientificas y Tecnicas. Centro Cientifico Tecnologico Conicet - La Plata. Instituto de Biotecnologia y Biologia Molecular. Universidad Nacional de La Plata. Facultad de Ciencias Exactas. Instituto de Biotecnologia y Biologia Molecular; Argentina

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References
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Journal ArticleDOI

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

TL;DR: A new method to align two or more genomes that have undergone rearrangements due to recombination and substantial amounts of segmental gain and loss is described, demonstrating high accuracy in situations where genomes have undergone biologically feasible amounts of genome rearrangement, segmental loss and loss.
Journal ArticleDOI

Rapid extraction of bacterial genomic DNA with guanidium thiocyanate

TL;DR: The method, which was applicable to both Gram‐positive and Gram‐negative bacteria, eliminated endogenous nuclease activity and avoided the need for phenol, RNase and protease treatments.
Journal ArticleDOI

An integrated pipeline for de novo assembly of microbial genomes.

TL;DR: An assembly pipeline called A5 (Andrew And Aaron's Awesome Assembly pipeline) is presented that simplifies the entire genome assembly process by automating these stages, by integrating several previously published algorithms with new algorithms for quality control and automated assembly parameter selection.
Journal ArticleDOI

Burkholderia cepacia complex bacteria: opportunistic pathogens with important natural biology

TL;DR: The current understanding of the Burkholderia cepacia complex (Bcc) as a group of model opportunistic pathogens is reviewed, contrasting their clinical epidemiology with their ecological importance.
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