Journal ArticleDOI
Genome-wide association mapping of starch granule size distribution in common wheat
Jieyun Li,Awais Rasheed,Awais Rasheed,Qi Guo,Yan Dong,Jindong Liu,Xianchun Xia,Yan Zhang,Zhonghu He,Zhonghu He +9 more
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TLDR
The loci identified in this study and associated markers could provide basis for manipulating SG size to obtain superior noodle quality in wheat.About:
This article is published in Journal of Cereal Science.The article was published on 2017-09-01. It has received 10 citations till now. The article focuses on the topics: Common wheat & Endosperm.read more
Citations
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Journal ArticleDOI
Genome-wide association studies of seven agronomic traits under two sowing conditions in bread wheat
Muhammad Jamil,Aamir Ali,Alvina Gul,Abdul Ghafoor,Abdul Aziz Napar,Amir M. H. Ibrahim,Naima Huma Naveed,Nasim Ahmad Yasin,Abdul Mujeeb-Kazi +8 more
TL;DR: This study identifies the essential resource of genetics research and underpins the chromosomal regions of seven agronomic traits under normal and high temperature in spring wheat genotypes.
Journal ArticleDOI
Genome-Wide Association Mapping for Tolerance to Preharvest Sprouting and Low Falling Numbers in Wheat.
Shantel A. Martinez,Jayfred Gaham V. Godoy,Meng Huang,Zhiwu Zhang,Arron H. Carter,Kimberly Garland Campbell,Camille M. Steber +6 more
TL;DR: In this paper, the authors identified loci associated with PHS tolerance in U.S. Pacific Northwest germplasm based both on the Hagberg-Perten Falling Number (FN) test and spike-wetting test data.
Journal ArticleDOI
Genome-wide association study reveals the genetic basis of cold tolerance in wheat
TL;DR: A genome-wide association study of low-temperature tolerance at the seedling stage of wheat detected 63 loci including 76 significant SNPs associated with cold resistance and identified 85 candidate genes related to cold resistance.
Journal ArticleDOI
Genotyping by multiplexed sequencing (GMS): A customizable platform for genomic selection
Travis M. Ruff,Travis M. Ruff,Elliott J. Marston,Jonathan D. Eagle,Sajal Sthapit,Marcus A. Hooker,Daniel Z. Skinner,Daniel Z. Skinner,Deven R. See,Deven R. See +9 more
TL;DR: A new PCR-based genotyping technology that multiplexes thousands of single nucleotide polymorphism (SNP) markers with high-throughput capabilities in a simple protocol using a two-step PCR approach is demonstrated.
Journal ArticleDOI
Genetic loci determining potato starch yield and granule morphology revealed by genome-wide association study (GWAS)
TL;DR: A genome-wide association study using a 22K SNP potato array is performed to identify for the first time genomic regions associated with starch granule morphology and to increase number of known genome loci associated with potato starch yield.
References
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Journal ArticleDOI
Inference of population structure using multilocus genotype data
TL;DR: Pritch et al. as discussed by the authors proposed a model-based clustering method for using multilocus genotype data to infer population structure and assign individuals to populations, which can be applied to most of the commonly used genetic markers, provided that they are not closely linked.
Journal ArticleDOI
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.
TL;DR: It is found that in most cases the estimated ‘log probability of data’ does not provide a correct estimation of the number of clusters, K, and using an ad hoc statistic ΔK based on the rate of change in the log probability between successive K values, structure accurately detects the uppermost hierarchical level of structure for the scenarios the authors tested.
Journal ArticleDOI
Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array
Shichen Wang,Debbie Wong,Kerrie Forrest,Alexandra M. Allen,Shiaoman Chao,Bevan Emma Huang,Marco Maccaferri,Silvio Salvi,Sara Giulia Milner,Luigi Cattivelli,Anna M. Mastrangelo,Alex Whan,Stuart Stephen,Gary L A Barker,Ralf Wieseke,Joerg Plieske,Morten Lillemo,Diane E. Mather,Rudi Appels,Rudy Dolferus,Gina Brown-Guedira,Abraham B. Korol,Alina Akhunova,Catherine Feuillet,Catherine Feuillet,Jérôme Salse,Michele Morgante,Curtis J. Pozniak,Ming-Cheng Luo,Jan Dvorak,Matthew K. Morell,Jorge Dubcovsky,Jorge Dubcovsky,Martin W. Ganal,Roberto Tuberosa,Cindy Lawley,Ivan Mikoulitch,Colin Cavanagh,Keith J. Edwards,Matthew J. Hayden,Eduard Akhunov +40 more
TL;DR: The developed array and cluster identification algorithms provide an opportunity to infer detailed haplotype structure in polyploid wheat and will serve as an invaluable resource for diversity studies and investigating the genetic basis of trait variation in wheat.
Journal ArticleDOI
Separation and Characterization of A- and B-Type Starch Granules in Wheat Endosperm
TL;DR: In this paper, microsieving or centrifugal sedimentation through aqueous solutions of sucrose, maltose, or Percoll were used to separate A- and B-type starch granules.
Journal ArticleDOI
Effect of Small and Large Wheat Starch Granules on Thermomechanical Behavior of Starch
Eleni Chiotelli,Martine Le Meste +1 more
TL;DR: In this article, the physicochemical properties of small and large granule wheat starches were investigated to reveal whether gelatinization properties and rheological behavior differ between size classes of wheat starch.
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Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array
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