J
Jie Bai
Researcher at Stony Brook University
Publications - 30
Citations - 1301
Jie Bai is an academic researcher from Stony Brook University. The author has contributed to research in topics: Stacking fault & Vicinal. The author has an hindex of 13, co-authored 30 publications receiving 1084 citations. Previous affiliations of Jie Bai include State University of New York System & Fauna & Flora International.
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The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Jun-Xing Yang,Xiaoli Chen,Jie Bai,Dongming Fang,Ying Qiu,Wansheng Jiang,Hui Yuan,Chao Bian,Jiang Lu,Shiyang He,Xiao-Fu Pan,Yaolei Zhang,Xiaoai Wang,Xinxin You,Yongsi Wang,Ying Sun,Danqing Mao,Yong Liu,Guangyi Fan,He Zhang,Xiao-Yong Chen,Xinhui Zhang,Lan-Ping Zheng,Jintu Wang,Le Cheng,Jieming Chen,Zhiqiang Ruan,Jia Li,Hui Yu,Chao Peng,Ma Xingyu,Junmin Xu,You He,Zhengfeng Xu,Pao Xu,Jian Wang,Huanming Yang,Jun Wang,Tony Whitten,Xun Xu,Qiong Shi +40 more
TL;DR: As the first report on cavefish genomes among distinct species in Sinocyclocheilus, this work provides not only insights into genetic mechanisms of cave adaptation, but also represents a fundamental resource for a better understanding of cavefish biology.
Additional file 5: Figure S15â S17. of The Sinocyclocheilus cavefish genome provides insights into cave adaptation
Jun-Xing Yang,Xiaoli Chen,Jie Bai,Dongming Fang,Ying Qiu,Wansheng Jiang,Hui Yuan,Chao Bian,Jiang Lu,Shiyang He,Xiao-Fu Pan,Yaolei Zhang,Xiaoai Wang,Xinxin You,Yongsi Wang,Ying Sun,Danqing Mao,Yong Liu,Guangyi Fan,He Zhang,Xiao-Yong Chen,Xinhui Zhang,Lan-Ping Zheng,Jintu Wang,Le Cheng,Jieming Chen,Zhiqiang Ruan,Jia Li,Hui Yu,Chao Peng,Xingyu,Junmin Xu,You He,Zhengfeng Xu,Pao Xu,Jian Wang,Huanming Yang,Jun Wang,Tony Whitten,Xun Xu,Qiong Shi +40 more
Journal ArticleDOI
The seahorse genome and the evolution of its specialized morphology
Qiang Lin,Shaohua Fan,Yanhong Zhang,Meng Xu,Huixian Zhang,Huixian Zhang,Yulan Yang,Alison P. Lee,Joost M. Woltering,Vydianathan Ravi,Helen M. Gunter,Wei Luo,Zexia Gao,Zhi Wei Lim,Geng Qin,Ralf F. Schneider,Xin Wang,Peiwen Xiong,Gang Li,Kai Wang,Jiumeng Min,Chi Zhang,Ying Qiu,Jie Bai,Weiming He,Chao Bian,Xinhui Zhang,Dai Shan,Hongyue Qu,Ying Sun,Qiang Gao,Liangmin Huang,Qiong Shi,Axel Meyer,Byrappa Venkatesh,Byrappa Venkatesh +35 more
TL;DR: The sequencing and de novo assembly of the genome of the tiger tail seahorse, Hippocampus comes is reported and it is found that the H. comes genome lacks enamel matrix protein-coding proline/glutamine-rich secretory calcium-binding phosphoprotein genes, which might have led to the loss of mineralized teeth.
Journal ArticleDOI
The pearl oyster Pinctada fucata martensii genome and multi-omic analyses provide insights into biomineralization.
Xiaodong Du,Guangyi Fan,Yu Jiao,He Zhang,Ximing Guo,Ronglian Huang,Zhe Zheng,Chao Bian,Yuewen Deng,Qingheng Wang,Zhongduo Wang,Xinming Liang,Haiying Liang,Chengcheng Shi,Xiaoxia Zhao,Fengming Sun,Ruijuan Hao,Jie Bai,Jialiang Liu,Wenbin Chen,Jinlian Liang,Weiqing Liu,Zhe Xu,Qiong Shi,Xun Xu,Guofan Zhang,Xin Liu +26 more
TL;DR: The highly polymorphic genome of the pearl oyster is sequenced and a large set of novel proteins participating in matrix-framework formation are identified, including components similar to that found in vertebrate bones such as collagen-related VWA-containing proteins, chondroitin sulfotransferases, and regulatory elements.
Journal ArticleDOI
Mudskipper genomes provide insights into the terrestrial adaptation of amphibious fishes
Xinxin You,Chao Bian,Qijie Zan,Xun Xu,Xin Liu,Jieming Chen,Jintu Wang,Ying Qiu,Wujiao Li,Xinhui Zhang,Ying Sun,Shixi Chen,Wanshu Hong,Yuxiang Li,Shifeng Cheng,Guangyi Fan,Chengcheng Shi,Jie Liang,Y. Tom Tang,Chengye Yang,Zhiqiang Ruan,Jie Bai,Chao Peng,Qian Mu,Jun Lu,Mingjun Fan,Shuang Yang,Zhiyong Huang,Xuanting Jiang,Xiaodong Fang,Guojie Zhang,Yong Zhang,Gianluca Polgar,Hui Yu,Jia Li,Zhong-Jian Liu,Guo-Qiang Zhang,Vydianathan Ravi,Steven L. Coon,Jian Wang,Huanming Yang,Byrappa Venkatesh,Jun Wang,Jun Wang,Qiong Shi +44 more
TL;DR: In this article, the genomes of four different mudskipper species were sequenced and genetic changes that may have had an evolutionary role in the water-to-land transition of vertebrates were highlighted.