J
Jürg Bähler
Researcher at University College London
Publications - 237
Citations - 24955
Jürg Bähler is an academic researcher from University College London. The author has contributed to research in topics: Schizosaccharomyces pombe & Gene. The author has an hindex of 67, co-authored 227 publications receiving 21327 citations. Previous affiliations of Jürg Bähler include University of Debrecen & European Bioinformatics Institute.
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Pyphe, a python toolbox for assessing microbial growth and cell viability in high-throughput colony screens.
Stephan Kamrad,Stephan Kamrad,María Rodríguez-López,Cristina Cotobal,Clara Correia-Melo,Markus Ralser,Markus Ralser,Jürg Bähler +7 more
TL;DR: An all-in-one solution, pyphe, for automating and improving data analysis pipelines associated with large-scale fitness screens, including image acquisition and quantification, data normalisation, and statistical analysis is presented.
Journal ArticleDOI
Cip1 and Cip2 Are Novel RNA-Recognition-Motif Proteins That Counteract Csx1 Function during Oxidative Stress
Victoria Martín,Miguel A. Rodríguez-Gabriel,W. Hayes McDonald,Stephen Watt,John R. Yates,Jürg Bähler,Paul Russell +6 more
TL;DR: In this article, two related proteins, Cip1 and Cip2, were identified by multidimensional protein identification technology (MudPIT) as proteins that coprecipitate with Csx1.
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Simplified primer design for PCR-based gene targeting and microarray primer database: two web tools for fission yeast
TL;DR: A straightforward web‐based tool that applies user‐specified inputs to automate and simplify the task of primer selection for deletion, tagging and/or regulated expression of genes in Schizosaccharomyces pombe.
Journal ArticleDOI
Stress induces remodelling of yeast interaction and co-expression networks
Sonja Lehtinen,Francesc Xavier Marsellach,Sandra Codlin,Alexander Schmidt,Mathieu Clément-Ziza,Andreas Beyer,Jürg Bähler,Christine A. Orengo,Vera Pancaldi +8 more
TL;DR: Stress induces tighter co-regulation of non-coding RNAs, decreased functional importance of splicing factors, as well as changes in the centrality of genes involved in chromatin organization, cytoskeleton organization, cell division, and protein turnover.
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Global gene expression of fission yeast in response to cisplatin.
Laura Gatti,Dongrong Chen,Giovanni Luca Beretta,Gabriella Rustici,N. Carenini,Elisabetta Corna,Donato Colangelo,F. Zunino,Jürg Bähler,Paola Perego +9 more
TL;DR: In two isogenic strains with differing drug sensitivity, cisplatin activated a stress response involving glutathione-S-transferase, heat shock, and recombinational repair genes, and genes required for proteasome-mediated protein degradation were up-regulated in the sensitive strain, whereas genes for DNA damage recognition/repair and for mitotic progression were induced in the resistant strain.