S
Sam Griffiths-Jones
Researcher at University of Manchester
Publications - 120
Citations - 49386
Sam Griffiths-Jones is an academic researcher from University of Manchester. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 54, co-authored 115 publications receiving 44697 citations. Previous affiliations of Sam Griffiths-Jones include University of Nottingham & Manchester Academic Health Science Centre.
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Journal ArticleDOI
RNAcentral: an international database of ncRNA sequences.
Anton I. Petrov,Simon Kay,Richard Gibson,Eugene Kulesha,Dan Staines,Elspeth A. Bruford,Mathew W. Wright,Sarah W. Burge,Robert D. Finn,Paul J. Kersey,Guy Cochrane,Alex Bateman,Sam Griffiths-Jones,Jennifer Harrow,Patricia P. Chan,Todd M. Lowe,Christian W Zwieb,Jacek Wower,Kelly P. Williams,Corey M. Hudson,Robin R. Gutell,Michael B. Clark,Marcel E. Dinger,Xiu Cheng Quek,Janusz M. Bujnicki,Nam-Hai Chua,Jun Liu,Huan Wang,Geir Skogerbø,Yi Zhao,Runsheng Chen,Weimin Zhu,James R. Cole,Benli Chai,Hsien Da Huang,His Yuan Huang,J. Michael Cherry,Artemis G. Hatzigeorgiou,Kim D. Pruitt +38 more
TL;DR: The first release of RNAcentral is presented, a database that collates and integrates information from an international consortium of established RNA sequence databases that contains over 8.1 million sequences.
Journal ArticleDOI
Bias in microRNA functional enrichment analysis.
TL;DR: It is shown that the most commonly used functional enrichment test is inappropriate for the analysis of sets of genes targeted by miRNAs, and is argued against continued use of the standard functional enrichment method for miRNA targets.
Journal ArticleDOI
Erratum: The DNA sequence and biological annotation of human chromosome 1 (Nature (2006) 441 (315-321))
Simon G. Gregory,K F Barlow,Kirsten McLay,R Kaul,David Swarbreck,Andrew Dunham,Carol Scott,Kerstin Howe,K Woodfine,Spencer Cca.,Matthew Jones,Christopher J. Gillson,S. Searle,Y Zhou,Felix Kokocinski,L McDonald,R Evans,Katharine A. Phillips,A Atkinson,R Cooper,C Jones,Rebekah Hall,T D Andrews,Christine Lloyd,R Ainscough,J P Almeida,K D Ambrose,F Anderson,R. W. Andrew,Ashwell Ris.,K Aubin,A K Babbage,C L Bagguley,J Bailey,Ruby Banerjee,Helen Beasley,Graeme Bethel,Christine P. Bird,S Bray-Allen,J Y Brown,A J Brown,S P Bryant,D Buckley,D C Burford,Burrill Wdh.,John Burton,Jacqueline M. Bye,C Carder,J C Chapman,S Y Clark,G Clarke,C M Clee,S. M. Clegg,V. Cobley,R. E. Collier,N Corby,G. J. Coville,Joy Davies,Rebecca Deadman,Pawandeep Dhami,Oliver M. Dovey,Matthew Dunn,M Earthrowl,A. G. Ellington,H Errington,L M Faulkner,Adam Frankish,J Frankland,Lisa French,P Garner,J Garnett,Ghori Mrj.,Richard Gibson,L M Gilby,W Gillett,Rebecca Glithero,Darren Grafham,Susan M. Gribble,C Griffiths,Sam Griffiths-Jones,Russell J. Grocock,S Hammond,Harrison Esi.,E. Hart,E Haugen,Paul Heath,S. Holmes,Kathryn E. Holt,Philip Howden,Adrienne Hunt,Sarah E. Hunt,G Hunter,J Isherwood,R James,Chris Johnson,David H. Johnson,A Joy,M. Kay,J K Kershaw +98 more
TL;DR: This corrects the article to show that the method used to derive the H2O2 “spatially aggregating force” is based on a two-step process, not a single step, like in the previous version of this paper.
Journal ArticleDOI
Mutations in SNORD118 cause the cerebral microangiopathy leukoencephalopathy with calcifications and cysts
Emma M. Jenkinson,Mathieu P Rodero,Paul R. Kasher,Carolina Uggenti,Anthony Oojageer,Laurence C. Goosey,Yoann Rose,Christopher J. Kershaw,Jill E. Urquhart,Simon G. Williams,Sanjeev S. Bhaskar,James O'Sullivan,Gabriela M. Baerlocher,Monika Haubitz,Geraldine Aubert,Kristin W. Barañano,Kristin W. Barañano,Angela Barnicoat,Roberta Battini,Andrea Berger,Edward Blair,Janice E. Brunstrom-Hernandez,Johannes A. Buckard,David Cassiman,Rosaline Caumes,Duccio Maria Cordelli,Liesbeth De Waele,Alex J. Fay,Patrick Ferreira,Nicholas A. Fletcher,Alan Fryer,Himanshu Goel,Cheryl Hemingway,Marco Henneke,Imelda Hughes,Rosalind J. Jefferson,Ram L. Kumar,Lieven Lagae,Pierre Landrieu,Charles Marques Lourenço,Timothy J. Malpas,Sarju G. Mehta,Imke Metz,Sakkubai Naidu,Katrin Õunap,Katrin Õunap,Axel Panzer,Prab Prabhakar,Gerardine Quaghebeur,Raphael Schiffmann,Elliott H. Sherr,Kanaga R. Sinnathuray,Calvin Soh,H. Stewart,John Stone,Hilde Van Esch,Christine E. G. van Mol,Adeline Vanderver,Emma Wakeling,Andrea Whitney,Graham D. Pavitt,Sam Griffiths-Jones,Gillian I. Rice,Patrick Revy,Patrick Revy,Marjo S. van der Knaap,Marjo S. van der Knaap,John H. Livingston,Raymond T. O'Keefe,Yanick J. Crow,Yanick J. Crow,Yanick J. Crow +71 more
TL;DR: It is shown that biallelic mutations in the gene SNORD118, encoding the box C/D snoRNA U8, cause the cerebral microangiopathy leukoencephalopathy with calcifications and cysts (LCC), presenting at any age from early childhood to late adulthood.
Journal ArticleDOI
Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum
Tobias Mourier,Celine Carret,Sue Kyes,Zoe Christodoulou,Paul P. Gardner,Daniel C. Jeffares,Robert Pinches,Bart Barrell,Matthew Berriman,Sam Griffiths-Jones,Alasdair Ivens,Chris I. Newbold,Arnab Pain +12 more
TL;DR: A genome-wide search for novel noncoding RNAs (ncRNA) in the malaria parasite Plasmodium falciparum has verified the expression of 33 novel ncRNA transcripts including four members of a nc RNA family in the asexual blood stage and supporting evidence for purifying selection acting on the experimentally verified ncRNAs is provided.