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Xiangang Huang
Researcher at Beijing Institute of Genomics
Publications - 9
Citations - 2587
Xiangang Huang is an academic researcher from Beijing Institute of Genomics. The author has contributed to research in topics: Genome & Hybrid genome assembly. The author has an hindex of 7, co-authored 9 publications receiving 2452 citations. Previous affiliations of Xiangang Huang include Chinese Academy of Sciences.
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Journal ArticleDOI
A draft sequence for the genome of the domesticated silkworm (Bombyx mori).
Qingyou Xia,Zeyang Zhou,Cheng Lu,Daojun Cheng,Fangyin Dai,Bin Li,Ping Zhao,Xingfu Zha,Tingcai Cheng,Chunli Chai,Guoqing Pan,Jinshan Xu,Chun Liu,Ying Lin,Ji-Feng Qian,Yong Hou,Zhengli Wu,Guanrong Li,Minhui Pan,Chunfeng Li,Yihong Shen,Xiqian Lan,Lianwei Yuan,Tian Li,Hanfu Xu,Guangwei Yang,Yongji Wan,Yong Zhu,Maode Yu,Weide Shen,Dayang Wu,Zhonghuai Xiang,Jun Yu,Jun Yu,Jun Wang,Jun Wang,Ruiqiang Li,Jianping Shi,Heng Li,Guangyuan Li,Jianning Su,Xiaoling Wang,Guoqing Li,Zengjin Zhang,Qingfa Wu,Jun Li,Qingpeng Zhang,Ning Wei,Jianzhe Xu,Haibo Sun,Le Dong,Dongyuan Liu,Shengli Zhao,Xiaolan Zhao,Qingshun Meng,Fengdi Lan,Xiangang Huang,Yuanzhe Li,Lin Fang,Changfeng Li,Dawei Li,Yongqiao Sun,Zhenpeng Zhang,Zheng Yang,Yanqing Huang,Yan Xi,Qiuhui Qi,Dandan He,Haiyan Huang,Xiaowei Zhang,Zhiqiang Wang,Wenjie Li,Yuzhu Cao,Yingpu Yu,Hong Yu,Jinhong Li,Jiehua Ye,Huan Chen,Yan Zhou,Bin Liu,Jing Wang,Jia Ye,Hai Ji,Shengting Li,Peixiang Ni,Jianguo Zhang,Yong Zhang,Hongkun Zheng,Bingyu Mao,Wen Wang,Chen Ye,Songgang Li,Jian Wang,Jian Wang,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Huanming Yang,Huanming Yang +98 more
TL;DR: A draft sequence for the genome of the domesticated silkworm (Bombyx mori), covering 90.9% of all known silkworm genes is reported, which exceeds the estimated gene count for Drosophila melanogaster.
Journal ArticleDOI
The Genomes of Oryza sativa: a history of duplications.
Jun Yu,Jun Yu,Jun Wang,Jun Wang,Wei Lin,Songgang Li,Songgang Li,Heng Li,Heng Li,Jun Zhou,Peixiang Ni,Wei Dong,Songnian Hu,Changqing Zeng,Jianguo Zhang,Yong Zhang,Yong Zhang,Ruiqiang Li,Zuyuan Xu,Shengting Li,Xianran Li,Hongkun Zheng,Lijuan Cong,Liang Lin,Jianning Yin,Jianing Geng,Guangyuan Li,Jianping Shi,Juan Liu,Hong Lv,Jun Li,Jing Wang,Jing Wang,Yajun Deng,Longhua Ran,Xiaoli Shi,Xiaoli Shi,Xiyin Wang,Xiyin Wang,Qingfa Wu,Changfeng Li,Xiaoyu Ren,Jingqiang Wang,Xiaoling Wang,Dawei Li,Dongyuan Liu,Xiaowei Zhang,Zhendong Ji,Wenming Zhao,Yongqiao Sun,Zhenpeng Zhang,Jingyue Bao,Yujun Han,Lingli Dong,Jia Ji,Peng Chen,Shuming Wu,Jinsong Liu,Ying Xiao,Dongbo Bu,Jianlong Tan,Li Yang,Chen Ye,Jingfen Zhang,Jingyi Xu,Yan Zhou,Yingpu Yu,Bing Zhang,Shulin Zhuang,Haibin Wei,Bin Liu,Meng Lei,Hong Yu,Yuanzhe Li,Hao Xu,Shulin Wei,Ximiao He,Lijun Fang,Zengjin Zhang,Yunze Zhang,Xiangang Huang,Zhixi Su,Wei Tong,Jinhong Li,Zongzhong Tong,Shuangli Li,Jia Ye,Lishun Wang,Lin Fang,Tingting Lei,Chen Chen,Huan Chen,Zhao Xu,Haihong Li,Haiyan Huang,Feng Zhang,Huayong Xu,Na Li,Caifeng Zhao,Shuting Li,Lijun Dong,Yanqing Huang,Long Li,Yan Xi,Qiuhui Qi,Wenjie Li,Bo Zhang,Wei Hu,Yanling Zhang,Xiangjun Tian,Yongzhi Jiao,Xiaohu Liang,Jiao Jin,Jiao Jin,Lei Gao,Lei Gao,Wei-Mou Zheng,Wei-Mou Zheng,Bailin Hao,Bailin Hao,Siqi Liu,Siqi Liu,Wen Wang,Wen Wang,Longping Yuan,Mengliang Cao,Jason E. McDermott,Ram Samudrala,Jian Wang,Jian Wang,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Huanming Yang,Huanming Yang +134 more
TL;DR: A more inclusive new approach for analyzing duplication history is introduced here, which reveals an ancient whole-genome duplication, a recent segmental duplication on Chromosomes 11 and 12, and massive ongoing individual gene duplications.
Journal ArticleDOI
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
Gane Ka-Shu Wong,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Bin Liu,Jun Wang,Jun Wang,Yong Zhang,Yong Zhang,Xu Yang,Zengjin Zhang,Qingshun Meng,Jun Zhou,Dawei Li,Jingjing Zhang,Peixiang Ni,Songgang Li,Songgang Li,Longhua Ran,Heng Li,Jianguo Zhang,Ruiqiang Li,Shengting Li,Hongkun Zheng,Wei Lin,Guangyuan Li,Xiaoling Wang,Wenming Zhao,Jun Li,Chen Ye,Mingtao Dai,Jue Ruan,Yan Zhou,Yuanzhe Li,Ximiao He,Yunze Zhang,Jing Wang,Jing Wang,Xiangang Huang,Wei Tong,Jie Chen,Jia Ye,Jia Ye,Chen Chen,Ning Wei,Guoqing Li,Le Dong,Fengdi Lan,Yongqiao Sun,Zhenpeng Zhang,Zheng Yang,Yingpu Yu,Yanqing Huang,Dandan He,Yan Xi,Dong Wei,Qiuhui Qi,Wenjie Li,Jianping Shi,Miaoheng Wang,Fei Xie,Jianjun Wang,Xiaowei Zhang,Pei Wang,Yiqiang Zhao,Ning Li,Ning Yang,Wei Dong,Songnian Hu,Changqing Zeng,Wei-Mou Zheng,Bailin Hao,LaDeana W. Hillier,Shiaw Pyng Yang,Wesley C. Warren,Richard K. Wilson,Mikael Brandström,Hans Ellegren,Richard P. M. A. Crooijmans,Jan J. van der Poel,Henk Bovenhuis,Martien A. M. Groenen,Ivan Ovcharenko,Laurie Gordon,Laurie Gordon,Lisa Stubbs,Susan Lucas,Tijana Glavina,Andrea Aerts,Peter K. Kaiser,Lisa Rothwell,John R. Young,Sally L. Rogers,Brian A Walker,Andy van Hateren,James C. Kaufman,Nat Bumstead,Susan J. Lamont,Huaijun Zhou,Paul M Hocking,David R. Morrice,Dirk-Jan de Koning,Andy Law,Neil Bartley,David W. Burt,Henry D. Hunt,Hans H. Cheng,Ulrika Gunnarsson,Per Wahlberg,Leif Andersson,Leif Andersson,Ellen Kindlund,Martti T. Tammi,Martti T. Tammi,Björn Andersson,Caleb Webber,Chris P. Ponting,Ian M. Overton,Paul E. Boardman,Haizhou Tang,Simon J. Hubbard,Stuart A. Wilson,Jun Yu,Jun Yu,Jian Wang,Jian Wang,Huanming Yang,Huanming Yang +126 more
TL;DR: This map is based on a comparison of the sequences of three domestic chicken breeds with that of their wild ancestor, red jungle fowl, and indicates that at least 90% of the variant sites are true SNPs, and at least 70% are common SNPs that segregate in many domestic breeds.
Journal ArticleDOI
Characterization of soybean genomic features by analysis of its expressed sequence tags
Ai-Guo Tian,Jun Wang,Peng Cui,Yujun Han,Hao Xu,Lijuan Cong,Xiangang Huang,Xiaoling Wang,Yongzhi Jiao,B. Wang,Yongjun Wang,Jin-Song Zhang,Shou-Yi Chen +12 more
TL;DR: Soybean unigenes with no match to genes within the Arabidopsis genome were identified as soybean-specific genes and 61 genes regulated by salicylic acid, 1,322 transcription factor genes and 326 disease resistance-like genes from soybeanUnigenes were identified.
Journal ArticleDOI
RePS: A Sequence Assembler That Masks Exact Repeats Identified from the Shotgun Data
Jun Wang,Gane Ka-Shu Wong,Peixiang Ni,Yujun Han,Xiangang Huang,Jianguo Zhang,Chen Ye,Yong Zhang,Jianfei Hu,Kunlin Zhang,Xin Xu,Lijuan Cong,Hong Lu,Xide Ren,Xiaoyu Ren,Jun He,Lin Tao,Douglas A. Passey,Jian Wang,Huanming Yang,Jun Yu,Songgang Li +21 more
TL;DR: A sequence assembler is described that explicitly identifies exact 20mer repeats from the shotgun data and removes them prior to the assembly, showing with real data for human and rice that reasonable assemblies are possible even at coverages of only 4x to 6x.