M
Mikael Brandström
Researcher at Uppsala University
Publications - 14
Citations - 4109
Mikael Brandström is an academic researcher from Uppsala University. The author has contributed to research in topics: Genome & Microsatellite. The author has an hindex of 14, co-authored 14 publications receiving 3954 citations. Previous affiliations of Mikael Brandström include Swedish University of Agricultural Sciences.
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Journal ArticleDOI
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution
LaDeana W. Hillier,Webb Miller,Ewan Birney,Wesley C. Warren,Ross C. Hardison,Chris P. Ponting,Peer Bork,David W. Burt,Martien A. M. Groenen,Mary E. Delany,Jerry B. Dodgson,Asif T. Chinwalla,Paul F. Cliften,Sandra W. Clifton,Kimberly D. Delehaunty,Catrina Fronick,Robert S. Fulton,Tina Graves,Colin Kremitzki,Dan Layman,Vincent Magrini,John Douglas Mcpherson,Tracie L. Miner,Patrick Minx,William E. Nash,Michael N. Nhan,Joanne O. Nelson,Lachlan G. Oddy,Craig Pohl,Jennifer Randall-Maher,Scott M. Smith,John W. Wallis,Shiaw Pyng Yang,Michael N Romanov,Catherine M. Rondelli,Bob Paton,Jacqueline Smith,David Morrice,Laura M. Daniels,Helen G. Tempest,Lindsay Robertson,Julio S. Masabanda,Darren K. Griffin,Alain Vignal,Valerie Fillon,Lina Jacobbson,Susanne Kerje,Leif Andersson,Richard P. M. A. Crooijmans,Jan Aerts,Jan J. van der Poel,Hans Ellegren,Randolph B. Caldwell,Simon J. Hubbard,Darren Grafham,Andrzej M. Kierzek,Stuart McLaren,Ian M. Overton,Hiroshi Arakawa,Kevin J. Beattie,Yuri Bezzubov,Paul E. Boardman,James K. Bonfield,Michael D. R. Croning,Robert L. Davies,Matthew D. Francis,Sean Humphray,Carol Scott,Ruth Taylor,Cheryll Tickle,William Brown,Jane Rogers,Jean-Marie Buerstedde,Stuart A. Wilson,Lisa Stubbs,Ivan Ovcharenko,Laurie Gordon,Susan Lucas,Marcia M. Miller,Hidetoshi Inoko,Takashi Shiina,James C. Kaufman,Jan Salomonsen,Karsten Skjoedt,Gane Ka-Shu Wong,Jun Wang,Bin Liu,Jian Wang,Jun Yu,Huanming Yang,Mikhail Nefedov,Maxim Koriabine,Pieter J. deJong,Leo Goodstadt,Caleb Webber,Nicholas J. Dickens,Ivica Letunic,Mikita Suyama,David Torrents,Christian von Mering,Evgeny M. Zdobnov,Kateryna D. Makova,Anton Nekrutenko,Laura Elnitski,Pallavi Eswara,David C. King,Shan Yang,Svitlana Tyekucheva,Anusha Radakrishnan,Robert S. Harris,Francesca Chiaromonte,James Taylor,Jianbin He,Monique Rijnkels,Sam Griffiths-Jones,Abel Ureta-Vidal,Michael M. Hoffman,Jessica Severin,Stephen M. J. Searle,Andy Law,David Speed,D. Waddington,Ze Cheng,Eray Tüzün,Evan E. Eichler,Zhirong Bao,Paul Flicek,David Shteynberg,Michael R. Brent,Jacqueline M. Bye,Elizabeth J. Huckle,Sourav Chatterji,Colin N. Dewey,Lior Pachter,Andrei Kouranov,Zissimos Mourelatos,Artemis G. Hatzigeorgiou,Andrew H. Paterson,Robert Ivarie,Mikael Brandström,Erik Axelsson,Niclas Backström,Sofia Berlin,Matthew T. Webster,Olivier Pourquié,Alexandre Reymond,Catherine Ucla,Stylianos E. Antonarakis,Manyuan Long,J. J. Emerson,Esther Betrán,Isabelle Dupanloup,Henrik Kaessmann,Angie S. Hinrichs,Gill Bejerano,Terrence S. Furey,Rachel A. Harte,Brian J. Raney,Adam Siepel,W. James Kent,David Haussler,Eduardo Eyras,Robert Castelo,Josep F. Abril,Sergi Castellano,Francisco Camara,Genís Parra,Roderic Guigó,Guillaume Bourque,Glenn Tesler,Pavel A. Pevzner,Arian F.A. Smit,Lucinda Fulton,Elaine R. Mardis,Richard K. Wilson +174 more
TL;DR: A draft genome sequence of the red jungle fowl, Gallus gallus, provides a new perspective on vertebrate genome evolution, while also improving the annotation of mammalian genomes.
Journal ArticleDOI
A genetic variation map for chicken with 2.8 million single-nucleotide polymorphisms
Gane Ka-Shu Wong,Gane Ka-Shu Wong,Gane Ka-Shu Wong,Bin Liu,Jun Wang,Jun Wang,Yong Zhang,Yong Zhang,Xu Yang,Zengjin Zhang,Qingshun Meng,Jun Zhou,Dawei Li,Jingjing Zhang,Peixiang Ni,Songgang Li,Songgang Li,Longhua Ran,Heng Li,Jianguo Zhang,Ruiqiang Li,Shengting Li,Hongkun Zheng,Wei Lin,Guangyuan Li,Xiaoling Wang,Wenming Zhao,Jun Li,Chen Ye,Mingtao Dai,Jue Ruan,Yan Zhou,Yuanzhe Li,Ximiao He,Yunze Zhang,Jing Wang,Jing Wang,Xiangang Huang,Wei Tong,Jie Chen,Jia Ye,Jia Ye,Chen Chen,Ning Wei,Guoqing Li,Le Dong,Fengdi Lan,Yongqiao Sun,Zhenpeng Zhang,Zheng Yang,Yingpu Yu,Yanqing Huang,Dandan He,Yan Xi,Dong Wei,Qiuhui Qi,Wenjie Li,Jianping Shi,Miaoheng Wang,Fei Xie,Jianjun Wang,Xiaowei Zhang,Pei Wang,Yiqiang Zhao,Ning Li,Ning Yang,Wei Dong,Songnian Hu,Changqing Zeng,Wei-Mou Zheng,Bailin Hao,LaDeana W. Hillier,Shiaw Pyng Yang,Wesley C. Warren,Richard K. Wilson,Mikael Brandström,Hans Ellegren,Richard P. M. A. Crooijmans,Jan J. van der Poel,Henk Bovenhuis,Martien A. M. Groenen,Ivan Ovcharenko,Laurie Gordon,Laurie Gordon,Lisa Stubbs,Susan Lucas,Tijana Glavina,Andrea Aerts,Peter K. Kaiser,Lisa Rothwell,John R. Young,Sally L. Rogers,Brian A Walker,Andy van Hateren,James C. Kaufman,Nat Bumstead,Susan J. Lamont,Huaijun Zhou,Paul M Hocking,David R. Morrice,Dirk-Jan de Koning,Andy Law,Neil Bartley,David W. Burt,Henry D. Hunt,Hans H. Cheng,Ulrika Gunnarsson,Per Wahlberg,Leif Andersson,Leif Andersson,Ellen Kindlund,Martti T. Tammi,Martti T. Tammi,Björn Andersson,Caleb Webber,Chris P. Ponting,Ian M. Overton,Paul E. Boardman,Haizhou Tang,Simon J. Hubbard,Stuart A. Wilson,Jun Yu,Jun Yu,Jian Wang,Jian Wang,Huanming Yang,Huanming Yang +126 more
TL;DR: This map is based on a comparison of the sequences of three domestic chicken breeds with that of their wild ancestor, red jungle fowl, and indicates that at least 90% of the variant sites are true SNPs, and at least 70% are common SNPs that segregate in many domestic breeds.
Journal ArticleDOI
Ancient DNA Reveals Lack of Continuity between Neolithic Hunter-Gatherers and Contemporary Scandinavians
Helena Malmström,Helena Malmström,M. Thomas P. Gilbert,Mark G. Thomas,Mikael Brandström,Jan Storå,Petra Molnar,Pernille K. Andersen,Christian Bendixen,Gunilla Holmlund,Anders Götherström,Eske Willerslev +11 more
TL;DR: Through analysis of DNA extracted from ancient Scandinavian human remains, it is shown that people of the Pitted Ware culture were not the direct ancestors of modern Scandinavians but are more closely related to contemporary populations of the eastern Baltic region.
Journal ArticleDOI
Insertion-deletion polymorphisms (indels) as genetic markers in natural populations
TL;DR: It is suggested that indels will come to form an important source of genetic markers, easy and cheap to genotype, for studies of natural populations, showing their utility even in a population with low genetic diversity.
Journal ArticleDOI
Staying out in the cold: glacial refugia and mitochondrial DNA phylogeography in ancient European brown bears.
Cristina Valdiosera,Nuria García,Cecilia Anderung,Cecilia Anderung,Love Dalén,Evelyne Crégut-Bonnoure,Ralf-Dietrich Kahlke,Mathias Stiller,Mikael Brandström,Mark G. Thomas,Juan Luis Arsuaga,Anders Götherström,Ian Barnes +12 more
TL;DR: This work proposes continuous gene flow across southern Europe, from which brown bear populations expanded after the last glaciation, and shows a complex phylogeographical history for western European populations.