University of Amsterdam

About: University of Amsterdam is a education organization based out in Amsterdam, Noord-Holland, Netherlands. It is known for research contribution in the topics: Population & Context (language use). The organization has 59309 authors who have published 140894 publications receiving 5984137 citations. The organization is also known as: UvA & Universiteit van Amsterdam.

Human type 1 innate lymphoid cells accumulate in inflamed mucosal tissues

Abstract: Innate lymphoid cells (ILCs) are effectors of innate immunity and regulators of tissue modeling Recently identified ILC populations have a cytokine expression pattern that resembles that of the helper T cell subsets T(H)2, T(H)17 and T(H)22 Here we describe a distinct ILC subset similar to T(H)1 cells, which we call 'ILC1' ILC1 cells expressed the transcription factor T-bet and responded to interleukin 12 (IL-12) by producing interferon-γ (IFN-γ) ILC1 cells were distinct from natural killer (NK) cells as they lacked perforin, granzyme B and the NK cell markers CD56, CD16 and CD94, and could develop from RORγt(+) ILC3 under the influence of IL-12 The frequency of the ILC1 subset was much higher in inflamed intestine of people with Crohn's disease, which indicated a role for these IFN-γ-producing ILC1 cells in the pathogenesis of gut mucosal inflammation

Contextual modulation in primary visual cortex.

Abstract: We studied extra-receptive field contextual modulation in area V1 of awake, behaving macaque monkeys. Contextual modulation was studied using texture displays in which texture covering the receptive field (RF) was the same in all trials, but the perceptual context of this texture could vary depending on the configuration of extra-RF texture elements. We found robust contextual modulation when disparity, color, luminance, and orientation cues variously defined a textured figure centered on the RF of V1 neurons. We found contextual modulation to have a spatial extent of ;8 to 10° diameter parafoveally. Contextual modulation correlated with perceptual experience of both binocularly rivalrous texture displays and of displays with a simple example of surface occlusion. We found contextual modulation in V1 to have a characteristic latency of 80‐100 msec after stimulus onset, potentially allowing feedback from extrastriate areas to underlie to this effect.

Visual Word Ambiguity

Abstract: This paper studies automatic image classification by modeling soft assignment in the popular codebook model. The codebook model describes an image as a bag of discrete visual words selected from a vocabulary, where the frequency distributions of visual words in an image allow classification. One inherent component of the codebook model is the assignment of discrete visual words to continuous image features. Despite the clear mismatch of this hard assignment with the nature of continuous features, the approach has been successfully applied for some years. In this paper, we investigate four types of soft assignment of visual words to image features. We demonstrate that explicitly modeling visual word assignment ambiguity improves classification performance compared to the hard assignment of the traditional codebook model. The traditional codebook model is compared against our method for five well-known data sets: 15 natural scenes, Caltech-101, Caltech-256, and Pascal VOC 2007/2008. We demonstrate that large codebook vocabulary sizes completely deteriorate the performance of the traditional model, whereas the proposed model performs consistently. Moreover, we show that our method profits in high-dimensional feature spaces and reaps higher benefits when increasing the number of image categories.

Dynamics of cell wall structure in Saccharomyces cerevisiae.

Abstract: The cell wall of Saccharomyces cerevisiae is an elastic structure that provides osmotic and physical protection and determines the shape of the cell. The inner layer of the wall is largely responsible for the mechanical strength of the wall and also provides the attachment sites for the proteins that form the outer layer of the wall. Here we find among others the sexual agglutinins and the flocculins. The outer protein layer also limits the permeability of the cell wall, thus shielding the plasma membrane from attack by foreign enzymes and membrane-perturbing compounds. The main features of the molecular organization of the yeast cell wall are now known. Importantly, the molecular composition and organization of the cell wall may vary considerably. For example, the incorporation of many cell wall proteins is temporally and spatially controlled and depends strongly on environmental conditions. Similarly, the formation of specific cell wall protein–polysaccharide complexes is strongly affected by external conditions. This points to a tight regulation of cell wall construction. Indeed, all five mitogen-activated protein kinase pathways in bakers’ yeast affect the cell wall, and additional cell wall-related signaling routes have been identified. Finally, some potential targets for new antifungal compounds related to cell wall construction are discussed.