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Open AccessJournal ArticleDOI

A comparison of multivariate analysis techniques and variable selection strategies in a laser-induced breakdown spectroscopy bacterial classification

TLDR
The partial least squares discriminant analysis was more effective at distinguishing between highly similar spectra from closely related bacterial genera and may be the preferred multivariate technique in future species-level or strain-level classifications.
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This article is published in Spectrochimica Acta Part B: Atomic Spectroscopy.The article was published on 2013-09-01 and is currently open access. It has received 38 citations till now. The article focuses on the topics: Discriminant function analysis & Partial least squares regression.

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Citations
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Journal ArticleDOI

Application of multivariate statistical techniques in microbial ecology.

TL;DR: This review describes and compares the most widely used multivariate statistical techniques including exploratory, interpretive and discriminatory procedures, and presents examples of how these approaches have been utilized in recent studies to provide insight into the ecology of the microbial world.
Journal ArticleDOI

Sample treatment and preparation for laser-induced breakdown spectroscopy

TL;DR: In this paper, the authors highlight the work of many LIBS researchers who have developed, adapted, and improved upon sample preparation techniques for various specimen types in order to improve the quality of the analytical data that LIBS can produce in a large number of research domains.
Journal ArticleDOI

On the utilization of principal component analysis in laser-induced breakdown spectroscopy data analysis, a review

TL;DR: This work critically assess and elaborate on the approaches to utilize PCA in LIBS data processing, and derives some implications and suggests advice in data preprocessing, visualization, dimensionality reduction, model building, classification, quantification and non-conventional multivariate mapping.
Journal ArticleDOI

A critical review of recent progress in analytical laser-induced breakdown spectroscopy

TL;DR: This review attempts to give a critical overview of the diverse progress of the field, focusing on the results of the last five years, of laser-induced breakdown spectroscopy.
Journal ArticleDOI

Laser-induced breakdown spectroscopy for human and animal health: A review

TL;DR: Laser-Induced Breakdown Spectroscopy is in a stage of great vitality as an analytical technique, with new research emerging trends likely to play an important role in the future development of the technique as well as in its penetration in the medical field.
References
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Journal ArticleDOI

The Effect of Bacterial Environmental and Metabolic Stresses on a Laser-Induced Breakdown Spectroscopy (LIBS) Based Identification of Escherichia Coli and Streptococcus Viridans

TL;DR: In this paper, the effect of adverse environmental and metabolic stresses have on the laser-induced breakdown spectroscopy (LIBS) identification of bacterial specimens was investigated, and a chemometric discriminant function analysis showed that the LIBS acquired from bacteria grown in these two media were indistinguishable and easily discriminated from spectra acquired from two other non-pathogenic E. coli strains.
Journal ArticleDOI

Pathogen identification with laser-induced breakdown spectroscopy: the effect of bacterial and biofluid specimen contamination

TL;DR: The common problem of sample contamination was studied by creating mixed samples to investigate the effect that the presence of a second contaminant bacterium in the specimen had on the LIBS-based identification of the primary pathogen.
Journal ArticleDOI

Discrimination of bacteria from Jamaican bauxite soils using laser-induced breakdown spectroscopy

TL;DR: Principal component analysis and partial least squares regression analysis were performed on the acquired bacterial spectra demonstrating that LIBS has the potential to differentiate and discriminate among bacteria in the un-mined and reclaimed chronosequence of bauxite soils.
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Q1. What are the contributions in "A comparison of multivariate analysis techniques and variable selection strategies in a laser-induced breakdown spectroscopy bacterial classification" ?

In this paper, the authors compared the use of three different down-selected variable models consisting of emission intensities, the sum of observed ∼4 intensities from the elements P, Ca, Mg, Na, C, and complex ratios of those intensities. 

Such a confirmation will need to be investigated in future work.