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Open AccessJournal ArticleDOI

Identification of an Intestinal Microbiota Signature Associated With Severity of Irritable Bowel Syndrome

TLDR
IBS symptom severity is found to be associated negatively with microbial richness, exhaled CH4, presence of methanogens, and enterotypes enriched with Clostridiales or Prevotella species.
About
This article is published in Gastroenterology.The article was published on 2017-01-01 and is currently open access. It has received 445 citations till now. The article focuses on the topics: Irritable bowel syndrome & Outpatient clinic.

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Citations
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The Brain-Gut-Microbiome Axis.

TL;DR: A systems biological model is proposed that posits circular communication loops amid the brain, gut, and gut microbiome, and in which perturbation at any level can propagate dysregulation throughout the circuit.
Journal ArticleDOI

Gut Microbiota in Patients With Irritable Bowel Syndrome-A Systematic Review.

TL;DR: In a systematic review, specific bacteria associated with microbiomes of patients with IBS vs controls were identified and studies are needed to determine whether these microbes are a product or cause of IBS.
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Systematic review with meta-analysis: the efficacy of prebiotics, probiotics, synbiotics and antibiotics in irritable bowel syndrome.

TL;DR: It is necessary to select patients suitable for vaginal or laparoscopic mesh placement for IBS preoperatively on the basis of prior history and once they provide informed consent for surgery.
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Impact of commonly used drugs on the composition and metabolic function of the gut microbiota

TL;DR: The impact of 41 commonly used medications on the taxonomic structures, metabolic potential and resistome of the gut microbiome is studied, underscoring the importance of correcting for multiple drug use in microbiome studies.
References
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Journal ArticleDOI

Controlling the false discovery rate: a practical and powerful approach to multiple testing

TL;DR: In this paper, a different approach to problems of multiple significance testing is presented, which calls for controlling the expected proportion of falsely rejected hypotheses -the false discovery rate, which is equivalent to the FWER when all hypotheses are true but is smaller otherwise.
Journal ArticleDOI

The Hospital Anxiety and Depression Scale.

TL;DR: It is suggested that the introduction of the scales into general hospital practice would facilitate the large task of detection and management of emotional disorder in patients under investigation and treatment in medical and surgical departments.
Journal ArticleDOI

UPARSE: highly accurate OTU sequences from microbial amplicon reads

Robert C. Edgar
- 01 Oct 2013 - 
TL;DR: The UPARSE pipeline reports operational taxonomic unit (OTU) sequences with ≤1% incorrect bases in artificial microbial community tests, compared with >3% correct bases commonly reported by other methods.
Journal Article

LIBLINEAR: A Library for Large Linear Classification

TL;DR: LIBLINEAR is an open source library for large-scale linear classification that supports logistic regression and linear support vector machines and provides easy-to-use command-line tools and library calls for users and developers.
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