B
Bert Bakker
Researcher at Leiden University Medical Center
Publications - 24
Citations - 3185
Bert Bakker is an academic researcher from Leiden University Medical Center. The author has contributed to research in topics: Cancer & DUX4. The author has an hindex of 20, co-authored 23 publications receiving 2975 citations. Previous affiliations of Bert Bakker include Leiden University.
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Journal ArticleDOI
Digenic inheritance of an SMCHD1 mutation and an FSHD-permissive D4Z4 allele causes facioscapulohumeral muscular dystrophy type 2
Richard J.L.F. Lemmers,Rabi Tawil,Lisa M. Petek,Judit Balog,Gregory J. Block,Gijs W. E. Santen,Amanda M. Amell,Patrick J. van der Vliet,Rowida Almomani,Kirsten R. Straasheijm,Yvonne D. Krom,Rinse Klooster,Yu-chun Sun,Johan T. den Dunnen,Quinta Helmer,Colleen M. Donlin-Smith,George W. Padberg,Baziel G.M. van Engelen,Jessica C. de Greef,Jessica C. de Greef,Annemieke Aartsma-Rus,Rune R. Frants,Marianne de Visser,Claude Desnuelle,Sabrina Sacconi,Galina N. Filippova,Bert Bakker,Michael J. Bamshad,Stephen J. Tapscott,Daniel G. Miller,Silvère M. van der Maarel +30 more
TL;DR: This study identifies SMCHD1 as an epigenetic modifier of the D4Z4 metastable epiallele and as a causal genetic determinant of FSHD2 and possibly other human diseases subject to epigenetic regulation.
Journal ArticleDOI
Genome-wide association study identifies three loci associated with melanoma risk.
D. Timothy Bishop,Florence Demenais,Mark M. Iles,Mark Harland,John C. Taylor,Eve Corda,Eve Corda,Juliette Randerson-Moor,Joanne F. Aitken,Marie-Françoise Avril,Esther Azizi,Bert Bakker,Giovanna Bianchi-Scarrà,Brigitte Bressac-de Paillerets,Donato Calista,Lisa A. Cannon-Albright,Thomas Chin-A-Woeng,Tadeusz Dębniak,Gilli Galore-Haskel,Paola Ghiorzo,Ivo Gut,Johan Hansson,Marko Hočevar,Veronica Höiom,John L. Hopper,Christian Ingvar,Peter A. Kanetsky,Richard F. Kefford,Maria Teresa Landi,Julie Lang,Jan Lubinski,Rona M. MacKie,Josep Malvehy,Graham J. Mann,Nicholas G. Martin,Grant W. Montgomery,Frans A. van Nieuwpoort,Srdjan Novaković,Håkan Olsson,Susana Puig,Marjan M. Weiss,Wilbert van Workum,Diana Zelenika,Kevin M. Brown,Alisa M. Goldstein,Elizabeth M. Gillanders,Anne Boland,Pilar Galan,David E. Elder,Nelleke A. Gruis,Nicholas K. Hayward,G. Mark Lathrop,G. Mark Lathrop,Jennifer H. Barrett,Julia A. Newton Bishop +54 more
TL;DR: Despite wide variation in allele frequency, these genetic variants show notable homogeneity of effect across populations of European ancestry living at different latitudes and show independent association to disease risk.
Journal ArticleDOI
Rapid detection of BRCA1 mutations by the protein truncation test
Fbl Hogervorst,R.S. Cornelis,M. Bout,M. van Vliet,Jan C. Oosterwijk,Renske Olmer,Bert Bakker,Jgm Klijn,H. F. A. Vasen,H Meijers Heijboer,Fred H. Menko,Cees J. Cornelisse,J.T. den Dunnen,Peter Devilee,Gjb van Ommen +14 more
TL;DR: The protein truncation test (PIT) is used to screen for mutations in exon 11, which encodes 61 % of BRCA1, and detects aberrantly spliced products affecting exons 5 and 6 in one of two BRCa1–linked families examined.
Journal ArticleDOI
Genome-wide association study identifies three new melanoma susceptibility loci
Jennifer H. Barrett,Mark M. Iles,Mark Harland,John C. Taylor,Joanne F. Aitken,Per Arne Andresen,Lars A. Akslen,Bruce K. Armstrong,Marie-Françoise Avril,Esther Azizi,Bert Bakker,Wilma Bergman,Giovanna Bianchi-Scarrà,Brigitte Bressac-de Paillerets,Brigitte Bressac-de Paillerets,Donato Calista,Lisa A. Cannon-Albright,Eve Corda,Anne E. Cust,Tadeusz Dȩbniak,David L. Duffy,Alison M. Dunning,Douglas F. Easton,Eitan Friedman,Pilar Galan,Paola Ghiorzo,Graham G. Giles,Graham G. Giles,Johan Hansson,Marko Hočevar,Veronica Höiom,John L. Hopper,Christian Ingvar,Bart Janssen,Mark A. Jenkins,Göran Jönsson,Richard F. Kefford,Giorgio Landi,Maria Teresa Landi,Julie Lang,Jan Lubinski,Rona M. MacKie,Josep Malvehy,Nicholas G. Martin,Anders Molven,Grant W. Montgomery,Frans A. van Nieuwpoort,Srdjan Novaković,Håkan Olsson,Lorenza Pastorino,Susana Puig,Joan Anton Puig-Butille,Juliette Randerson-Moor,Helen Snowden,Rainer Tuominen,Patricia Van Belle,Nienke van der Stoep,David C. Whiteman,Diana Zelenika,Jiali Han,Shenying Fang,Jeffrey E. Lee,Qingyi Wei,G. Mark Lathrop,Elizabeth M. Gillanders,Kevin M. Brown,Alisa M. Goldstein,Peter A. Kanetsky,Graham J. Mann,Stuart MacGregor,David E. Elder,Christopher I. Amos,Nicholas K. Hayward,Nelleke A. Gruis,Florence Demenais,Julia A. Newton Bishop,D. Timothy Bishop +76 more
TL;DR: Seven new regions with at least one SNP with P < 10−5 and further local imputed or genotyped support were selected for replication using two other genome-wide studies and showed no association with nevus or pigmentation phenotypes in a large British case-control series.
Journal ArticleDOI
Hereditary nonpolyposis colorectal cancer families not complying with the Amsterdam criteria show extremely low frequency of mismatch-repair-gene mutations.
Juul T. Wijnen,P. Meera Khan,Hans F. A. Vasen,Heleen M. van der Klift,Adri Mulder,Inge van Leeuwen-Cornelisse,Bert Bakker,Monique Losekoot,Pål Møller,Riccardo Fodde +9 more
TL;DR: The results emphasize the practical importance of the Amsterdam criteria, which provide a valid clinical subdivision between families, on the basis of their chance of carrying an hMSH2 or an hMLH1 mutation, and which bear important consequences for genetic testing and counseling and for the management of colorectal cancer families.