I
Irene Farabella
Researcher at Birkbeck, University of London
Publications - 32
Citations - 1312
Irene Farabella is an academic researcher from Birkbeck, University of London. The author has contributed to research in topics: Chromatin & Chromosome conformation capture. The author has an hindex of 13, co-authored 28 publications receiving 937 citations. Previous affiliations of Irene Farabella include University College London.
Papers
More filters
Journal ArticleDOI
Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling
Guy Nir,Irene Farabella,Cynthia Pérez Estrada,Cynthia Pérez Estrada,Cynthia Pérez Estrada,Carl G. Ebeling,Brian J. Beliveau,Hiroshi Sasaki,Hiroshi Sasaki,S. Dean Lee,Son C. Nguyen,Ruth B. McCole,Shyamtanu Chattoraj,Jelena Erceg,Jumana AlHaj Abed,Nuno Martins,Huy Q. Nguyen,Mohammed A. Hannan,Sheikh Russell,Neva C. Durand,Neva C. Durand,Suhas S.P. Rao,Suhas S.P. Rao,Suhas S.P. Rao,Jocelyn Y. Kishi,Jocelyn Y. Kishi,Paula Soler-Vila,Michele Di Pierro,José N. Onuchic,Steven P. Callahan,John M. Schreiner,Jeff A. Stuckey,Peng Yin,Peng Yin,Erez Lieberman Aiden,Marc A. Marti-Renom,C.-ting Wu,C.-ting Wu +37 more
TL;DR: Focusing on chromosomal regions that contribute to compartments, it is discovered that distinct structures that, in spite of considerable variability, can predict whether such regions correspond to active or inactive compartments.
Journal ArticleDOI
Human pancreatic islet three-dimensional chromatin architecture provides insights into the genetics of type 2 diabetes
Irene Miguel-Escalada,Sílvia Bonàs-Guarch,Inês Cebola,Joan Ponsa-Cobas,Julen Mendieta-Esteban,Goutham Atla,Biola M. Javierre,Delphine M.Y. Rolando,Irene Farabella,Claire Morgan,Javier García-Hurtado,Anthony Beucher,Ignasi Moran,Ignasi Moran,Lorenzo Pasquali,Mireia Ramos-Rodríguez,Emil V. R. Appel,Allan Linneberg,Allan Linneberg,Anette P. Gjesing,Daniel R. Witte,Ole Birger Pedersen,Niels Grarup,Philippe Ravassard,David Torrents,David Torrents,Josep M. Mercader,Josep M. Mercader,Josep M. Mercader,Lorenzo Piemonti,Thierry Berney,Eelco J.P. de Koning,Julie Kerr-Conte,François Pattou,Iryna O. Fedko,Iryna O. Fedko,Leif Groop,Inga Prokopenko,Inga Prokopenko,Torben Hansen,Marc A. Marti-Renom,Peter Fraser,Peter Fraser,Jorge Ferrer +43 more
TL;DR: Human islet 3D chromatin architecture provides a framework for interpretation of T2D genome-wide association study (GWAS) signals and identifies more than 1,300 three-dimensional regulatory hubs, linking diabetes-associated enhancers to their target genes.
Journal ArticleDOI
Stepwise visualization of membrane pore formation by suilysin, a bacterial cholesterol-dependent cytolysin
Carl Leung,Natalya V Dudkina,Natalya Lukoyanova,Adrian W. Hodel,Irene Farabella,Arun Prasad Pandurangan,Nasrin Jahan,Mafalda Pires Damaso,Dino Osmanović,Cyril F. Reboul,Michelle A. Dunstone,Peter W. Andrew,Rana Lonnen,Maya Topf,Helen R. Saibil,Bart W. Hoogenboom +15 more
TL;DR: It is shown that suilysin assembly is a noncooperative process that is terminated before the protein inserts into the membrane, and the resulting ring-shaped pores and kinetically trapped arc-shaped assemblies are all seen to perforate the membrane.
Journal ArticleDOI
Mutations in SLC12A5 in epilepsy of infancy with migrating focal seizures
Tommy Stödberg,Amy McTague,Arnaud Ruiz,Hiromi Hirata,Juan Zhen,Philip Long,Irene Farabella,Esther Meyer,Atsuo Kawahara,Grace Vassallo,Stavros Stivaros,Magnus K. Bjursell,Henrik Stranneheim,Henrik Stranneheim,Stephanie Tigerschiöld,Stephanie Tigerschiöld,Bengt Persson,Iftikhar Bangash,Krishna B. Das,Deborah Hughes,Nicole Lesko,Joakim Lundeberg,Rod C. Scott,Annapurna Poduri,Ingrid E. Scheffer,Holly Smith,Paul Gissen,Stephanie Schorge,Maarten E. A. Reith,Maya Topf,Dimitri M. Kullmann,Robert J. Harvey,Anna Wedell,Anna Wedell,Manju A. Kurian,Manju A. Kurian +35 more
TL;DR: Rec recessive loss-of-function SLC12A5 mutations in patients with a severe infantile-onset pharmacoresistant epilepsy syndrome, epilepsy of infancy with migrating focal seizures (EIMFS), contribute to loss of KCC2 activity, thereby impairing normal synaptic inhibition and promoting neuronal excitability in this early-ONSet epileptic encephalopathy.
Journal ArticleDOI
Conformational Changes During Pore Formation by the Perforin-Related Protein Pleurotolysin.
Natalya Lukoyanova,S.C. Kondos,Irene Farabella,Ruby H. P. Law,Cyril F. Reboul,Tom T. Caradoc-Davies,Bradley A. Spicer,Oded Kleifeld,Daouda A K Traore,Susan M. Ekkel,Ilia Voskoboinik,Joseph A. Trapani,Tamas Zsolt Hatfaludi,Katherine V. Oliver,Eileen M. Hotze,Rodney K. Tweten,James C. Whisstock,Maya Topf,Helen R. Saibil,Michelle A. Dunstone +19 more
TL;DR: The results suggest that MACPF conformational change is triggered through disruption of the interface between a conserved helix-turn-helix motif and the top of TMH2, suggesting why this region is targeted by endogenous inhibitors of MACPF function.