K
Kai Lemcke
Researcher at Max Planck Society
Publications - 7
Citations - 866
Kai Lemcke is an academic researcher from Max Planck Society. The author has contributed to research in topics: Genome & Gene density. The author has an hindex of 5, co-authored 7 publications receiving 848 citations.
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Journal ArticleDOI
Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana
Klaus F. X. Mayer,C. Schüller,R. Wambutt,George Murphy,Guido Volckaert,Thomas Pohl,A. Düsterhöft,Willem J. Stiekema,K.-D. Entian,Nancy Terryn,Barbara Harris,Wilhelm Ansorge,Petra Brandt,Leslie A. Grivell,Michael A. Rieger,M. Weichselgartner,V De Simone,B. Obermaier,R. Mache,Mario Müller,M. Kreis,Michel Delseny,Pere Puigdomènech,Martin D. Watson,T. Schmidtheini,B. Reichert,D. Portatelle,Manuel Pérez-Alonso,Marc Boutry,Ian Bancroft,P. Vos,Joerg Hoheisel,Wolfgang Zimmermann,H. Wedler,P. Ridley,S. A. Langham,B. McCullagh,L. Bilham,Johan Robben,J. Van der Schueren,B. Grymonprez,Y. J. Chuang,F. Vandenbussche,M. Braeken,I. Weltjens,Marleen Voet,I. Bastiaens,Rita Aert,E. Defoor,T. Weitzenegger,G. Bothe,U. Ramsperger,H. Hilbert,M. Braun,E. Holzer,A. Brandt,Sander Peters,M. van Staveren,Wim G. Dirkse,P. Mooijman,R. Klein Lankhorst,M. Rose,J. Hauf,P. Kötter,S. Berneiser,S. Hempel,M. Feldpausch,S. Lamberth,H. Van den Daele,A. De Keyser,C. Buysshaert,J. Gielen,R. Villarroel,R. De Clercq,M. Van Montagu,Jane Rogers,A. Cronin,Michael A. Quail,S. Bray-Allen,L. Clark,J. Doggett,S. Hall,M. Kay,Nicola Lennard,K. McLay,R. Mayes,A. Pettett,Marie-Adèle Rajandream,M. Lyne,Vladimir Benes,S. Rechmann,D. Borkova,H. Blöcker,M. Scharfe,M. Grimm,T. H. Löhnert,S. Dose,M. de Haan,A.C. Maarse,M. Schäfer,S Müller-Auer,C. Gabel,M. Fuchs,Berthold Fartmann,K. Granderath,D. Dauner,A. Herzl,Sindy Neumann,Anagnostis Argiriou,D. Vitale,Rosario Liguori,E. Piravandi,O. Massenet,F. Quigley,G. Clabauld,A. Mündlein,R. Felber,S. Schnabl,R. Hiller,W. Schmidt,A. Lecharny,S. Aubourg,F. Chefdor,R. Cooke,C. Berger,A. Montfort,Elena Casacuberta,T. Gibbons,N. Weber,Micheline Vandenbol,M. D. Bargues,Javier Terol,A. Torres,A Perez-Perez,Bénédicte Purnelle,E. Bent,S. Johnson,D. Tacon,T. Jesse,Leo Heijnen,S. Schwarz,Patrik Scholler,Steffen Heber,P. Francs,C. Bielke,Dmitrij Frishman,D. Haase,Kai Lemcke,Hans-Werner Mewes,S. Stocker,P. Zaccaria,Michael W. Bevan,Richard K. Wilson,M. de la Bastide,K. Habermann,L. Parnell,Neilay Dedhia,L. Gnoj,K. Schutz,E. Huang,Lori Spiegel,M. Sehkon,Joseph A. Murray,P. Sheet,Matt Cordes,J. Abu-Threideh,T. Stoneking,Joelle Kalicki,Tina Graves,G. Harmon,Jennifer Edwards,P. Latreille,Laura Courtney,J. Cloud,A. Abbott,Kelsi Scott,David W. Johnson,Patrick Minx,David Bentley,Bob Fulton,N. Miller,T. Greco,K. Kemp,Jason B. Kramer,Lucinda Fulton,Elaine R. Mardis,Mike Dante,Kymberlie H. Pepin,LaDeana W. Hillier,Joanne O. Nelson,John Spieth,E. Ryan,S. Andrews,C. Geisel,Dan Layman,Hui Du,Johar Ali,A. Berghoff,K. Jones,K. Drone,M. Cotton,Corinne E. Joshu,B. Antonoiu,M. Zidanic,Cindy Strong,H. Sun,B. Lamar,C. Yordan,P. Ma,P. Ma,J. Zhong,J. Zhong,R. Preston,D. Vil,M. Shekher,A. Matero,R. Shah,I'k. Swaby,A. O'Shaughnessy,M. Rodriguez,J. Hoffman,S. Till,S. Granat,Nadim Shohdy,A. Hasegawa,Abdul Hameed,M. Lodhi,A. Johnson,A. Johnson,Ellson Y. Chen,Ellson Y. Chen,Marco A. Marra,Robert A. Martienssen,W. R. McCombie +233 more
TL;DR: Analysis of 17.38 megabases of unique sequence, representing about 17% of the Arabidopsis genome, reveals 3,744 protein coding genes, 81 transfer RNAs and numerous repeat elements.
Journal ArticleDOI
MIPS Arabidopsis thaliana Database (MAtDB): an integrated biological knowledge resource based on the first complete plant genome
Heiko Schoof,Paolo Zaccaria,Heidrun Gundlach,Kai Lemcke,Stephen Rudd,Grigory Kolesov,Roland Arnold,Hans-Werner Mewes,Klaus F. X. Mayer +8 more
TL;DR: The aim is to transform MAtDB into an integrated biological knowledge resource by integrating diverse data, tools, query and visualization capabilities and by creating a comprehensive resource for Arabidopsis as a reference model for other species, including crop plants.
Journal ArticleDOI
Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.
Marcel Salanoubat,Kai Lemcke,Michael A. Rieger,W. Ansorge,M Unseld,Berthold Fartmann,Giorgio Valle,H. Blöcker,Manuel Pérez-Alonso,B. Obermaier,Michel Delseny,Marc Boutry,Leslie A. Grivell,R Mache,Pere Puigdomènech,De Simone,Nathalie Choisne,François Artiguenave,C Robert,P Brottier,Patrick Wincker,Laurence Cattolico,Jean Weissenbach,W Saurin,Francis Quetier,M. Schäfer,S Müller-Auer,C. Gabel,M. Fuchs,Benes,E Wurmbach,H Drzonek,Holger Erfle,N Jordan,S Bangert,R Wiedelmann,H Kranz,H. Voss,Richard Holland,Petra Brandt,Gerald Nyakatura,Alessandro Vezzi,Michela D'Angelo,Alberto Pallavicini,Stefano Toppo,Barbara Simionati,A Conrad,K Hornischer,G Kauer,T. H. Löhnert,G Nordsiek,J Reichelt,M. Scharfe,O Schön,M. D. Bargues,Javier Terol,Joan Climent,P Navarro,C Collado,A Perez-Perez,B Ottenwälder,D Duchemin,R. Cooke,M Laudie,C Berger-Llauro,Bénédicte Purnelle,David Masuy,M. de Haan,A.C. Maarse,J P Alcaraz,A Cottet,Elena Casacuberta,Amparo Monfort,Anagnostis Argiriou,M flores,Rosario Liguori,D. Vitale,Gertrud Mannhaupt,D. Haase,Heiko Schoof,Stephen Rudd,Paolo Zaccaria,Hans-Werner Mewes,Klaus F. X. Mayer,Samir Kaul,Christopher D. Town,Hean L. Koo,Luke J. Tallon,J Jenkins,T Rooney,M. Rizzo,A Walts,T. Utterback,Claire Fujii,Terrance Shea,Todd Creasy,Brian J. Haas,Rama Maiti,Dongying Wu,Jeremy Peterson,S. van Aken,Grace Pai,J Militscher,P Sellers,John Gill,Tamara Feldblyum,Daphne Preuss,Xiaoying Lin,William C. Nierman,Steven L. Salzberg,Owen White,J C Venter,Claire M. Fraser,T Kaneko,Yasukazu Nakamura,Shusei Sato,T Kato,Erika Asamizu,Shigemi Sasamoto,T Kimura,Kumi Idesawa,Kumiko Kawashima,Yoshie Kishida,Chiaki Kiyokawa,Mitsuyo Kohara,M Matsumoto,Ai Matsuno,Akiko Muraki,S Nakayama,Naomi Nakazaki,Sayaka Shinpo,C Takeuchi,T Wada,A Watanabe,M Yamada,Miho Yasuda,Satoshi Tabata +136 more
TL;DR: In this paper, the authors present the sequence of chromosome 3, organized into four sequence segments (contigs), and the two largest (13.5 and 9.2 Mb) correspond to the top (long) and bottom (short) arms of the chromosome 3 and two small contigs are located in the genetically defined centromere.
Journal ArticleDOI
Conservation of Microstructure between a Sequenced Region of the Genome of Rice and Multiple Segments of the Genome of Arabidopsis thaliana
Klaus F. X. Mayer,George Murphy,Renato Tarchini,R. Wambutt,Guido Volckaert,Thomas Pohl,A. Düsterhöft,Willem J. Stiekema,Karl-Dieter Entian,Nancy Terryn,Kai Lemcke,Dirk Haase,Caroline R. Hall,Anne-Marie van Dodeweerd,Scott V. Tingey,Hans-Werner Mewes,Michael W. Bevan,Ian Bancroft +17 more
TL;DR: The results demonstrate that conservation of the genome microstructure can be identified even between monocot and dicot species, and are consistent with the hypothesis that the Arabidopsis genome has undergone multiple duplication events.
Journal ArticleDOI
Progress in Arabidopsis genome sequencing and functional genomics
R. Wambutt,George Murphy,Guido Volckaert,Thomas Pohl,A. Düsterhöft,Willem J. Stiekema,K.-D. Entian,Nancy Terryn,Barbara Harris,Wilhelm Ansorge,Petra Brandt,Leslie A. Grivell,Michael A. Rieger,M. Weichselgartner,V De Simone,B. Obermaier,R. Mache,Mathias Müller,M. Kreis,Michel Delseny,Pere Puigdomènech,Martin D. Watson,T. Schmidtheini,B. Reichert,D. Portatelle,Manuel Pérez-Alonso,Marc Boutry,Ian Bancroft,P. Vos,Joerg Hoheisel,Wolfgang Zimmermann,H. Wedler,P. Ridley,S. A. Langham,B. McCullagh,L. Bilham,Johan Robben,J. Van der Schueren,B. Grymonprez,Y. J. Chuang,F. Vandenbussche,M. Braeken,I. Weltjens,Marleen Voet,I. Bastiaens,Rita Aert,E. Defoor,T. Weitzenegger,G. Bothe,U. Ramsperger,H. Hilbert,M. Braun,E. Holzer,A. Brandt,Sander Peters,M. van Staveren,Wim G. Dirkse,P. Mooijman,R. Klein Lankhorst,M. Rose,J. Hauf,P. Kötter,S. Berneiser,S. Hempel,M. Feldpausch,S. Lamberth,H. Van den Daele,A. De Keyser,C. Buysshaert,J. Gielen,R. Villarroel,R. De Clercq,M. Van Montagu,Jane Rogers,A. Cronin,Michael A. Quail,S. Bray-Allen,L. Clark,J. Doggett,S. Hall,M. Kay,Nicola Lennard,K. McLay,R. Mayes,A. Pettett,Marie-Adèle Rajandream,M. Lyne,Vladimir Benes,S. Rechmann,D. Borkova,H. Blöcker,M. Scharfe,M. Grimm,T. H. Löhnert,S. Dose,M. de Haan,A.C. Maarse,M. Schäfer,S Müller-Auer,C. Gabel,M. Fuchs,Berthold Fartmann,K. Granderath,D. Dauner,A. Herzl,Sindy Neumann,Anagnostis Argiriou,D. Vitale,Rosario Liguori,E. Piravandi,O. Massenet,F. Quigley,G. Clabauld,A. Mündlein,R. Felber,S. Schnabl,R. Hiller,W. Schmidt,A. Lecharny,S. Aubourg,I Gy,R. Cooke,C. Berger,Amparo Monfort,Elena Casacuberta,T. Gibbons,N. Weber,Micheline Vandenbol,M. D. Bargues,Javier Terol,A. Torres,A Perez-Perez,Bénédicte Purnelle,E. Bent,S. Johnson,D. Tacon,T. Jesse,Leo Heijnen,S. Schwarz,Patrik Scholler,Steffen Heber,C. Bielke,D Frishmann,D. Haase,Kai Lemcke,Hans-Werner Mewes,S. Stocker,P. Zaccaria,Klaus F. X. Mayer,C. Schüller,Michael W. Bevan +150 more
TL;DR: The clustering of highly repetitive elements is a striking feature of the A. thaliana genome emerging from sequence and other analyses, indicating that local sequence duplication and subsequent divergence generates a significant proportion of gene families.