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Natalia Ivanova
Researcher at Lawrence Berkeley National Laboratory
Publications - 557
Citations - 40838
Natalia Ivanova is an academic researcher from Lawrence Berkeley National Laboratory. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 81, co-authored 543 publications receiving 35008 citations. Previous affiliations of Natalia Ivanova include Engelhardt Institute of Molecular Biology & Yale University.
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Draft genome sequence of Marinobacterium rhizophilum CL-YJ9T (DSM 18822T), isolated from the rhizosphere of the coastal tidal-flat plant Suaeda japonica
Dong Han Choi,Gwang Ii Jang,Alla Lapidus,Alla Lapidus,Alex Copeland,T. B. K. Reddy,Supratim Mukherjee,Marcel Huntemann,Neha Varghese,Natalia Ivanova,Manoj Pillay,Brian J. Tindall,Markus Göker,Tanja Woyke,Hans-Peter Klenk,Nikos C. Kyrpides,Byung Cheol Cho +16 more
TL;DR: The strain CL-YJ9T seems to adapt to osmotic changes by intracellular production as well as extracellular uptake of compatible solutes, such as ectoine and betaine, and has a number of genes to defense against oxygen stresses such as reactive oxygen species and hypoxia.
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SOP for pathway inference in Integrated Microbial Genomes (IMG)
TL;DR: One of the most important aspects of genomic analysis is the prediction of which pathways, both metabolic and non-metabolic, are present in an organism, in IMG, which is carried out by the assignment of IMG terms, which are organized into IMG pathways.
Journal ArticleDOI
The Genome of the Acid Soil-Adapted Strain Rhizobium favelukesii OR191 Encodes Determinants for Effective Symbiotic Interaction With Both an Inverted Repeat Lacking Clade and a Phaseoloid Legume Host
Bertrand D. Eardly,Wan Adnawani Meor Osman,Julie Ardley,J. Zandberg,Margaret Gollagher,Peter van Berkum,Patrick E. Elia,Dora Marinova,Rekha Seshadri,T. B. K. Reddy,Natalia Ivanova,Amrita Pati,Tanja Woyke,Nikos C. Kyrpides,Matthys J. Loedolff,Damian W. Laird,Wayne Reeve +16 more
TL;DR: The genome of R. favelukesii OR191 and genomic features important for the symbiotic interaction with both of these hosts are described and provided a foundation for the genetic basis of nodulation requirements and symbiotic effectiveness with different hosts.
Journal ArticleDOI
Stem cell epigenetics: looking forward.
Salvador Aznar Benitah,Adrian P. Bracken,Yali Dou,Danwei Huangfu,Natalia Ivanova,Haruhiko Koseki,Louise C. Laurent,Daniel A. Lim,Eran Meshorer,Ana Pombo,Maike Sander,Guoliang Xu +11 more
TL;DR: Author(s): Benitah, Salvador Aznar; Bracken, Adrian; Dou, Yali; Huangfu, Danwei; Ivanova, Natalia; Koseki, Haruhiko; Laurent, Louise; Lim, Daniel A; Meshorer, Eran; Pombo, Ana; Sander, Maike; Xu, Guo-Liang
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Near-Complete Genome Sequence of Thalassospira sp. Strain KO164 Isolated from a Lignin-Enriched Marine Sediment Microcosm.
Hannah L. Woo,Kaela B. O’Dell,Sagar M. Utturkar,Kathryn McBride,Marcel Huntemann,Alicia Clum,Manoj Pillay,Krishnaveni Palaniappan,Neha Varghese,Natalia Mikhailova,Dimitrios Stamatis,T. B. K. Reddy,Chew Yee Ngan,Chris Daum,Nicole Shapiro,Victor Markowitz,Natalia Ivanova,Nikos C. Kyrpides,Tanja Woyke,Steven D. Brown,Steven D. Brown,Terry C. Hazen +21 more
TL;DR: The near-complete genome sequence presented here will facilitate analyses into this deep-ocean bacterium's ability to degrade recalcitrant organics such as lignin.