S
Sébastien Duplessis
Researcher at University of Lorraine
Publications - 103
Citations - 11846
Sébastien Duplessis is an academic researcher from University of Lorraine. The author has contributed to research in topics: Gene & Melampsora. The author has an hindex of 40, co-authored 93 publications receiving 10487 citations. Previous affiliations of Sébastien Duplessis include Nancy-Université & Institut national de la recherche agronomique.
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Journal ArticleDOI
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)
Gerald A. Tuskan,Gerald A. Tuskan,Stephen P. DiFazio,Stephen P. DiFazio,Stefan Jansson,Joerg Bohlmann,Igor V. Grigoriev,Uffe Hellsten,Nicholas H. Putnam,Steven G. Ralph,Stephane Rombauts,Asaf Salamov,Jacquie Schein,Lieven Sterck,Andrea Aerts,Rishikeshi Bhalerao,Rishikesh P. Bhalerao,Damien Blaudez,Wout Boerjan,Annick Brun,Amy M. Brunner,Victor Busov,Malcolm M. Campbell,John E. Carlson,Michel Chalot,Jarrod Chapman,G.-L. Chen,Dawn Cooper,Pedro M. Coutinho,Jérémy Couturier,Sarah F. Covert,Quentin C. B. Cronk,R. Cunningham,John M. Davis,Sven Degroeve,Annabelle Déjardin,Claude W. dePamphilis,John C. Detter,Bill Dirks,Inna Dubchak,Inna Dubchak,Sébastien Duplessis,Jürgen Ehlting,Brian E. Ellis,Karla C Gendler,David Goodstein,Michael Gribskov,Jane Grimwood,Andrew Groover,Lee E. Gunter,Björn Hamberger,Berthold Heinze,Yrjö Helariutta,Yrjö Helariutta,Yrjö Helariutta,Bernard Henrissat,D. Holligan,Robert A. Holt,Wenyu Huang,N. Islam-Faridi,Steven J.M. Jones,M. Jones-Rhoades,Richard A. Jorgensen,Chandrashekhar P. Joshi,Jaakko Kangasjärvi,Jan Karlsson,Colin T. Kelleher,Robert Kirkpatrick,Matias Kirst,Annegret Kohler,Udaya C. Kalluri,Frank W. Larimer,Jim Leebens-Mack,Jean-Charles Leplé,Philip F. LoCascio,Y. Lou,Susan Lucas,Francis Martin,Barbara Montanini,Carolyn A. Napoli,David R. Nelson,C D Nelson,Kaisa Nieminen,Ove Nilsson,V. Pereda,Gary F. Peter,Ryan N. Philippe,Gilles Pilate,Alexander Poliakov,J. Razumovskaya,Paul G. Richardson,Cécile Rinaldi,Kermit Ritland,Pierre Rouzé,D. Ryaboy,Jeremy Schmutz,J. Schrader,Bo Segerman,H. Shin,Asim Siddiqui,Fredrik Sterky,Astrid Terry,Chung-Jui Tsai,Edward C. Uberbacher,Per Unneberg,Jorma Vahala,Kerr Wall,Susan R. Wessler,Guojun Yang,T. Yin,Carl J. Douglas,Marco A. Marra,Göran Sandberg,Y. Van de Peer,Daniel S. Rokhsar,Daniel S. Rokhsar +115 more
TL;DR: The draft genome of the black cottonwood tree, Populus trichocarpa, has been reported in this paper, with more than 45,000 putative protein-coding genes identified.
Journal ArticleDOI
The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis
Francis Martin,Andrea Aerts,Dag Ahrén,Annick Brun,Etienne Danchin,Frédéric Duchaussoy,Julien Gibon,Annegret Kohler,Erika Lindquist,V. Pereda,Asaf Salamov,Harris Shapiro,Jan Wuyts,Damien Blaudez,Marc Buée,Peter Brokstein,Björn Canbäck,David E. Cohen,Pierre-Emmanuel Courty,Pedro M. Coutinho,Christine Delaruelle,John C. Detter,Aurélie Deveau,Stephen P. DiFazio,Sébastien Duplessis,Laurence Fraissinet-Tachet,E. Lucic,Pascale Frey-Klett,C. Fourrey,Ivo Feussner,Jane Grimwood,Patrik J. Hoegger,Preti Jain,Sreedhar Kilaru,Jessy Labbé,Yao-Cheng Lin,Valérie Legué,F. Le Tacon,Roland Marmeisse,Delphine Melayah,Barbara Montanini,Michael Muratet,Uwe Nehls,Hélène Niculita-Hirzel,M. P. Oudot-Le Secq,Martina Peter,Hadi Quesneville,Balaji Rajashekar,Marlis Reich,Nicolas Rouhier,Jeremy Schmutz,T. Yin,Michel Chalot,Bernard Henrissat,Ursula Kües,Susan Lucas,Y. Van de Peer,Gopi K. Podila,Andrea Polle,Patricia J. Pukkila,Paul G. Richardson,Pierre Rouzé,Ian R. Sanders,Jason E. Stajich,Anders Tunlid,Gerald A. Tuskan,Igor V. Grigoriev +66 more
TL;DR: The predicted gene inventory of the L. bicolor genome points to previously unknown mechanisms of symbiosis operating in biotrophic mycorrhizal fungi, providing an unparalleled opportunity to develop a deeper understanding of the processes by which symbionts interact with plants within their ecosystem to perform vital functions in the carbon and nitrogen cycles that are fundamental to sustainable plant productivity.
Journal ArticleDOI
Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis
Francis Martin,Annegret Kohler,Claude Murat,Raffaella Balestrini,Pedro M. Coutinho,Olivier Jaillon,Barbara Montanini,Emmanuelle Morin,Benjamin Noel,Riccardo Percudani,Bettina Porcel,Andrea Rubini,Antonella Amicucci,Joelle Amselem,Véronique Anthouard,Sergio Arcioni,François Artiguenave,Jean-Marc Aury,Paola Ballario,Angelo Bolchi,Andrea Brenna,Annick Brun,Marc Buée,Brandi L. Cantarel,Gérard Chevalier,Arnaud Couloux,Corinne Da Silva,Sébastien Duplessis,Stefano Ghignone,Benoît Hilselberger,Mirco Iotti,Benoit Marçais,Antonietta Mello,Michele Miranda,Giovanni Pacioni,Hadi Quesneville,Claudia Riccioni,Roberta Ruotolo,Richard Splivallo,Vilberto Stocchi,Emilie Tisserant,Arturo R. Viscomi,Alessandra Zambonelli,Elisa Zampieri,Bernard Henrissat,Marc-Henri Lebrun,Francesco Paolocci,Paola Bonfante,Simone Ottonello,Patrick Wincker +49 more
TL;DR: The sequence of the haploid genome of T. melanosporum is reported, which at ∼125 megabases is the largest and most complex fungal genome sequenced so far and results from a proliferation of transposable elements accounting for ∼58% of the genome.
Journal ArticleDOI
Obligate biotrophy features unraveled by the genomic analysis of rust fungi
Sébastien Duplessis,Christina A. Cuomo,Yao-Cheng Lin,Andrea Aerts,Emilie Tisserant,Claire Veneault-Fourrey,David L. Joly,Stéphane Hacquard,Stéphane Hacquard,Joelle Amselem,Brandi L. Cantarel,Readman Chiu,Pedro M. Coutinho,Nicolas Feau,Nicolas Feau,Matthew A. Field,Pascal Frey,Eric Gelhaye,Jonathan M. Goldberg,Manfred Grabherr,Chinnappa D. Kodira,Chinnappa D. Kodira,Annegret Kohler,Ursula Kües,Erika Lindquist,Susan Lucas,Rohit Mago,Evan Mauceli,Emmanuelle Morin,Claude Murat,Jasmyn Pangilinan,Robert F. Park,Matthew Pearson,Hadi Quesneville,Nicolas Rouhier,Sharadha Sakthikumar,Asaf Salamov,Jeremy Schmutz,Benjamin Selles,Harris Shapiro,Philippe Tanguay,Gerald A. Tuskan,Gerald A. Tuskan,Bernard Henrissat,Yves Van de Peer,Pierre Rouzé,Jeffrey G. Ellis,Peter N. Dodds,Jacqueline E. Schein,Shaobin Zhong,Shaobin Zhong,Richard C. Hamelin,Igor V. Grigoriev,Les J. Szabo,Francis Martin +54 more
TL;DR: The dramatic up-regulation of transcripts coding for small secreted proteins, secreted hydrolytic enzymes, and transporters in planta suggests that they play a role in host infection and nutrient acquisition.
Obligate Biotrophy Features Unraveled by the Genomic Analysis of the Rust Fungi, Melampsora Iarici-populina and puccinia graminis f. sp. tritici
Susan Lucas,Igor V. Grigoriev,Andrea Aerts,A Lindquist,Jasmyn Pangilinan,Asaf Salamov,Harris Shapiro,Jeremy Schmutz,Sébastien Duplessis,Christina A. Cuomo,Yao-Cheng Lin,Emilie Tisserant,Claire Veneault-Fourrey,David L. Joly,Stéphane Hacquard,Joelle Amselem,Brandi L. Cantarel,Readman Chiu,P Couthinho,Nicolas Feau,Matthew A. Field,Pascal Frey,Eric Gelhaye,Jonathan M. Goldberg,Manfred Grabherr,Chinnappa D. Kodira,Annegret Kohler,Ursula Kües,Rohit Mago,Evan Mauceli,Emmanuelle Morin,Claude Murat,Robert F. Park,M Pearson,Hadi Quesneville,Nicolas Rouhier,Sharadha Sakthikumar,Benjamin Selles,P Tangay,Gerald A. Tuskan,Y de Peer,Bernard Henrissat,Pierre Rouzé,J G Ellis,Peter N. Dodds,Jacquie Schein,Shaobin Zhong,Richard C. Hamelin,Les J. Szabo +48 more
TL;DR: The dramatic upregulation of transcripts coding for SSPs, secreted hydrolytic enzymes, and transporters in planta suggests that they play a role in host infection and nutrient acquisition.