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Open AccessJournal ArticleDOI

Cospeciation vs host-shift speciation: methods for testing, evidence from natural associations and relation to coevolution

TLDR
Overall, there is now substantial evidence to suggest that coevolutionary dynamics of hosts and parasites do not favor long-term cospeciation, and approaches to compare divergence between pairwise associated groups of species, their advantages and pitfalls are outlined.
Abstract
'Summary' 347 I. 'Introduction' 348 II. 'Origin of the cospeciation concept' 349 III. 'Theoretical framework and methods for testing for cospeciation' 349 IV. 'Studies of natural associations reveal the prevalence of host shifts' 355 V. 'Relationship between host–symbiont coevolution and symbiont speciation' 378 VI. 'Conclusion' 381   'Acknowledgements' 381   References 381   Glossary 379 Summary Hosts and their symbionts are involved in intimate physiological and ecological interactions. The impact of these interactions on the evolution of each partner depends on the time-scale considered. Short-term dynamics – ‘coevolution’ in the narrow sense – has been reviewed elsewhere. We focus here on the long-term evolutionary dynamics of cospeciation and speciation following host shifts. Whether hosts and their symbionts speciate in parallel, by cospeciation, or through host shifts, is a key issue in host–symbiont evolution. In this review, we first outline approaches to compare divergence between pairwise associated groups of species, their advantages and pitfalls. We then consider recent insights into the long-term evolution of host–parasite and host–mutualist associations by critically reviewing the literature. We show that convincing cases of cospeciation are rare (7%) and that cophylogenetic methods overestimate the occurrence of such events. Finally, we examine the relationships between short-term coevolutionary dynamics and long-term patterns of diversification in host–symbiont associations. We review theoretical and experimental studies showing that short-term dynamics can foster parasite specialization, but that these events can occur following host shifts and do not necessarily involve cospeciation. Overall, there is now substantial evidence to suggest that coevolutionary dynamics of hosts and parasites do not favor long-term cospeciation.

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Citations
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The evolutionary history of vertebrate RNA viruses

TL;DR: Around 200 new vertebrates-specific viruses are discovered, and every vertebrate-specific viral family known to infect mammals and birds is also present in amphibians, reptiles or fish, suggesting that evolution of vertebrate viruses mirrors that of vertebrates hosts.
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Unraveling the processes shaping mammalian gut microbiomes over evolutionary time.

TL;DR: In this paper, the authors show that host phylogeny and major dietary shifts have affected the distribution of different gut bacterial lineages and did so on vastly different bacterial phylogenetic resolutions.
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The evolution and genetics of virus host shifts.

TL;DR: How evolutionary factors affect patterns of host shifts and disease emergence are examined, including the susceptibility of potential new hosts and how the same sequence changes are seen each time a virus infects a particular host.
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The human microbiome in evolution.

TL;DR: This review compares microbiomes from human populations, placing them in the context of microbes from humanity’s near and distant animal relatives, and proposes that this broader phylogenetic perspective is useful for understanding the mechanisms underlying human–microbiome interactions.
References
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Journal ArticleDOI

Phylogenies and the Comparative Method

TL;DR: A method of correcting for the phylogeny has been proposed, which specifies a set of contrasts among species, contrasts that are statistically independent and can be used in regression or correlation studies.
Journal ArticleDOI

Exotic plant invasions and the enemy release hypothesis

TL;DR: Competitive release through greater generalist enemy impact on natives seems to be an important but understudied mechanism of enemy release, but there is a serious need for experiments involving exclusion of natural enemies in invaded plant communities.

A new evolutionary law.

L. Van Valen
Journal ArticleDOI

Arms races between and within species.

TL;DR: The arms race concept is suggested to help to resolve three long-standing questions in evolutionary theory: one lineage may drive the other to extinction, one may reach an optimum, thereby preventing the other from doing so, and both sides may reach a mutual local optimum.
Journal ArticleDOI

Host Specialization in Phytophagous Insects

TL;DR: Investigations of the causes of host specialization in insects could contribute substantially to the understanding of the origin and maintenance of diversity in this group.
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