Journal ArticleDOI
Pathogenomics of Xanthomonas: understanding bacterium–plant interactions
Robert P. Ryan,Frank-Jörg Vorhölter,Neha Potnis,Jeffrey B. Jones,Marie-Anne Van Sluys,Adam J. Bogdanove,J. Maxwell Dow +6 more
TLDR
In this Review, the insights that functional and comparative genomic studies are providing into the adaptation of this group of bacteria to exploit the extraordinary diversity of plant hosts and different host tissues are discussed.Abstract:
Xanthomonas is a large genus of Gram-negative bacteria that cause disease in hundreds of plant hosts, including many economically important crops. Pathogenic species and pathovars within species show a high degree of host plant specificity and many exhibit tissue specificity, invading either the vascular system or the mesophyll tissue of the host. In this Review, we discuss the insights that functional and comparative genomic studies are providing into the adaptation of this group of bacteria to exploit the extraordinary diversity of plant hosts and different host tissues.read more
Citations
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Journal ArticleDOI
Top 10 plant pathogenic bacteria in molecular plant pathology
John W. Mansfield,Stéphane Genin,Shimpei Magori,Vitaly Citovsky,Malinee Sriariyanum,Pamela C. Ronald,Max Dow,Valérie Verdier,Steven V. Beer,Marcos A. Machado,Ian K. Toth,George P. C. Salmond,Gary D. Foster +12 more
TL;DR: A survey of bacterial pathologists asked them to nominate the bacterial pathogens they would place in a 'Top 10' based on scientific/economic importance, and a short section is presented on each bacterium in the Top 10 list and its importance, with the intention of initiating discussion and debate amongst the plant bacteriology community.
Book
Progress in Botany
TL;DR: Ant–plant interactions resulting in dispersal and distribution of plants, and moreover, in respect to speciation and to evolution of high ranked taxa within the fungi, discussed mainly in relation to the genus Pleurotus and the order Boletales.
Journal ArticleDOI
Ecology and Genomic Insights into Plant-Pathogenic and Plant-Nonpathogenic Endophytes.
Günter Brader,Stéphane Compant,Kathryn Vescio,Birgit Mitter,Friederike Trognitz,Li-Jun Ma,Angela Sessitsch +6 more
TL;DR: The differences and similarities between nonpathogenic and pathogenic endophytes in terms of host plant response, colonization strategy, and genome content are elaborate.
Journal ArticleDOI
Bacteriophages and Bacterial Plant Diseases.
TL;DR: The progress and challenges for phage-based disease biocontrol in food crops are examined.
Journal ArticleDOI
Xanthomonas campestris pv. campestris (cause of black rot of crucifers) in the genomic era is still a worldwide threat to brassica crops
Joana G. Vicente,Eric B. Holub +1 more
TL;DR: Xcc can cause disease in a large number of species of Brassicaceae, including economically important vegetable Brassica crops and a number of other cruciferous crops, ornamentals and weeds, including the model plant Arabidopsis thaliana.
References
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Principles of c-di-GMP signalling in bacteria.
TL;DR: This Review focuses on emerging principles of c-di-GMP signalling using selected systems in different bacteria as examples.
Journal ArticleDOI
Sugar transporters for intercellular exchange and nutrition of pathogens
Li Qing Chen,Bi Huei Hou,Sylvie Lalonde,Hitomi Takanaga,Mara L. Hartung,Xiao Qing Qu,Woei Jiun Guo,Jung Gun Kim,William Underwood,Bhavna Chaudhuri,Diane Chermak,Ginny Antony,Frank F. White,Shauna Somerville,Mary Beth Mudgett,Wolf B. Frommer +15 more
TL;DR: Using optical glucose sensors, a new class of sugar transporters are identified, named SWEETs, and it is shown that at least six out of seventeen Arabidopsis, two out of over twenty rice and two of seven homologues in Caenorhabditis elegans, and the single copy human protein, mediate glucose transport.
Journal ArticleDOI
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
A.C.R. da Silva,Jesus Aparecido Ferro,Fernando C. Reinach,Chuck S. Farah,Luiz Roberto Furlan,Ronaldo Bento Quaggio,Claudia Barros Monteiro-Vitorello,M. A. Van Sluys,Nalvo F. Almeida,Lucia Maria Carareto Alves,A. M. do Amaral,Maria Célia Bertolini,Luis Eduardo Aranha Camargo,Giovana Camarotte,Fabiana de Souza Cannavan,Cardozo Jc,Felipe S. Chambergo,L. P. Ciapina,Regina Maria Barretto Cicarelli,Luiz Lehmann Coutinho,Jeny R. Cursino-Santos,Hamza El-Dorry,J. B. Faria,Ari J. S. Ferreira,Rita de Cássia Café Ferreira,Maria Inês Tiraboschi Ferro,Eduardo Fernandes Formighieri,Marília Caixeta Franco,Christian C. Greggio,Arthur Gruber,Angela M. Katsuyama,Luciano Takeshi Kishi,Rui P. Leite,Eliana Gertrudes de Macedo Lemos,Manoel Victor Franco Lemos,E. C. Locali,Marcos Antonio Machado,Alda Maria Backx Noronha Madeira,Nilce Maria Martinez-Rossi,E. C. Martins,João Meidanis,Carlos Frederico Martins Menck,Cristina Yumi Miyaki,D. H. Moon,Leandro Marcio Moreira,M. T. M. Novo,Vagner K. Okura,Mariana Cabral de Oliveira,V. R. Oliveira,H. A. Pereira,Antonio Rossi,Janete Apparecida Desidério Sena,Cícero Lopes da Silva,R. F. B. de Souza,L. A. F. Spinola,Marco Aurélio Takita,Rodrigo Esaki Tamura,E. C. Teixeira,R. I. D. Tezza,M. Trindade dos Santos,Daniela Truffi,Siu Mui Tsai,Frank F. White,Frank F. White,João C. Setubal,João Paulo Kitajima +65 more
TL;DR: The genus Xanthomonas is a diverse and economically important group of bacterial phytopathogens, belonging to the γ-subdivision of the Proteobacteria, and several groups of strain-specific genes are identified and proposed mechanisms that may explain the differing host specificities and pathogenic processes are proposed.
Journal ArticleDOI
GenDB—an open source genome annotation system for prokaryote genomes
Folker Meyer,Alexander Goesmann,Alice C. McHardy,Daniela Bartels,Thomas Bekel,Jörn Clausen,Jörn Kalinowski,Burkhard Linke,Oliver Rupp,Robert Giegerich,Alfred Pühler +10 more
TL;DR: A genome annotation system for prokaryote genomes, which is well tested and readily adaptable to different tasks, and can be employed as a flexible framework for the large-scale evaluation of different annotation strategies.
Journal ArticleDOI
Biofilm dispersal in Xanthomonas campestris is controlled by cell–cell signaling and is required for full virulence to plants
TL;DR: One role of the β-mannanase during disease is to promote transitions from an aggregated or biofilm lifestyle to a planktonic lifestyle in response to the DSF signal.
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