C
Chris Sander
Researcher at Harvard University
Publications - 730
Citations - 273726
Chris Sander is an academic researcher from Harvard University. The author has contributed to research in topics: Large Hadron Collider & Protein structure. The author has an hindex of 178, co-authored 713 publications receiving 233287 citations. Previous affiliations of Chris Sander include Purdue University & University of Leeds.
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By structure predictions sequence-structure gap
Burkhard Rost,Chris Sander +1 more
TL;DR: The problem of accurately predicting protein three-dimensional structure from sequence has yet to be solved, but several new and promising methods that work in one, two, or three dimensions have invigorated the field and led to further improvements of prediction methods.
Journal ArticleDOI
Author Correction: Analyses of non-coding somatic drivers in 2,658 cancer whole genomes
Esther Rheinbay,Morten Nielsen,Federico Abascal,Jeremiah Wala,Ofer Shapira,Grace Tiao,Henrik Hornshøj,Julian M. Hess,Randi Istrup Juul,Zi-Jun Lin,Lars Feuerbach,Radhakrishnan Sabarinathan,Tobias Madsen,Jaegil Kim,Loris Mularoni,Shimin Shuai,A. Lanzós,Carl Herrmann,Yosef E. Maruvka,Ciyue Shen,Samirkumar B. Amin,Pratiti Bandopadhayay,Johanna Katharina Bertl,Keith A. Boroevich,John P. Busanovich,Joana Carlevaro-Fita,Dimple Chakravarty,Calvin Wing Yiu Chan,David W Craft,Priyanka Dhingra,Klev Diamanti,Nuno A. Fonseca,Abel Gonzalez-Perez,Qianyun Guo,Mark P. Hamilton,Nicholas J. Haradhvala,Chen Hong,Keren Isaev,Todd A. Johnson,Malene Juul,André Kahles,Abdullah Kahraman,Young-Wook Kim,Jan Komorowski,Kiran Kumar,Sushant Kumar,Donghoon Lee,Kjong-Van Lehmann,Yilong Li,Eric Minwei Liu,Lucas Lochovsky,Keunchil Park,Oriol Pich,Nicola D. Roberts,Gordon Saksena,Steven E. Schumacher,Nikos Sidiropoulos,Lina Sieverling,Nasa Sinnott-Armstrong,Chip Stewart,David Tamborero,Jose M. C. Tubio,Husen M. Umer,Liis Uusküla-Reimand,Claes Wadelius,Lina Wadi,Xiaotong Yao,Cheng-Zhong Zhang,Jing Zhang,James E. Haber,Asger Hobolth,Marcin Imielinski,Manolis Kellis,Michael S. Lawrence,Christian von Mering,Hidewaki Nakagawa,Benjamin J. Raphael,Mark A. Rubin,Chris Sander,Lincoln D. Stein,Joshua M. Stuart,T. Tsunoda,David A. Wheeler,Rory Johnson,Jüri Reimand,Marc Gerstein,Ekta Khurana,Peter J. Campbell,Nuria Lopez-Bigas,Joachim Weischenfeldt,Rameen Beroukhim,Inigo Martincorena,Jakob Skou Pedersen,Gad Getz +93 more
On the use of sequence homologies Identical pentapeptides can have cc (cooperativity/protein folding/amino acid sequence homology)
Wolfgang Kabsch,Chris Sander +1 more
TL;DR: The structural significance of short sequence homologies is investigated by searching proteins of known three-dimensional structure for subsequence identities by finding an identical pentapeptide sequence between two pro- teins, which is not a significant indication of structural similarity or of evolutionary kinship.
Posted ContentDOI
3D RNA from evolutionary couplings
TL;DR: A global statistical sequence probability model of co-variation in a pairs of nucleotide positions to detect 3D contacts is used, in analogy to recently developed breakthrough methods for computational protein folding, to help shed light on the structure and function of non-protein-coding RNAs as well as 3D-structured mRNAs.