S
Sai Guna Ranjan Gurazada
Researcher at Delaware Biotechnology Institute
Publications - 6
Citations - 2098
Sai Guna Ranjan Gurazada is an academic researcher from Delaware Biotechnology Institute. The author has contributed to research in topics: Small RNA & RNA. The author has an hindex of 5, co-authored 6 publications receiving 1947 citations. Previous affiliations of Sai Guna Ranjan Gurazada include Austrian Academy of Sciences & Donald Danforth Plant Science Center.
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Journal ArticleDOI
Genome sequencing and analysis of the model grass Brachypodium distachyon
John P. Vogel,David F. Garvin,Todd C. Mockler,Jeremy Schmutz,Daniel S. Rokhsar,Michael W. Bevan,Kerrie Barry,Susan Lucas,Miranda Harmon-Smith,Kathleen Lail,Hope Tice,Jane Grimwood,Neil McKenzie,Naxin Huo,Yong Q. Gu,Gerard R. Lazo,Olin D. Anderson,Frank M. You,Ming-Cheng Luo,Jan Dvorak,Jonathan M. Wright,Melanie Febrer,Dominika Idziak,Robert Hasterok,Erika Lindquist,Mei Wang,Samuel E. Fox,Henry D. Priest,Sergei A. Filichkin,Scott A. Givan,Douglas W. Bryant,Jeff H. Chang,Haiyan Wu,Wei Wu,An-Ping Hsia,Patrick S. Schnable,Anantharaman Kalyanaraman,Brad Barbazuk,Todd P. Michael,Samuel P. Hazen,Jennifer N. Bragg,Debbie Laudencia-Chingcuanco,Yiqun Weng,Georg Haberer,Manuel Spannagl,Klaus F. X. Mayer,Thomas Rattei,Therese Mitros,Sang-Jik Lee,Jocelyn K. C. Rose,Lukas A. Mueller,Thomas L. York,Thomas Wicker,Jan P. Buchmann,Jaakko Tanskanen,Alan H. Schulman,Heidrun Gundlach,Michael W. Bevan,Antonio Costa de Oliveira,Luciano da C. Maia,William R. Belknap,Ning Jiang,Jinsheng Lai,Liucun Zhu,Jianxin Ma,Cheng Sun,Ellen J. Pritham,Jérôme Salse,Florent Murat,Michael Abrouk,Rémy Bruggmann,Joachim Messing,Noah Fahlgren,Christopher M. Sullivan,James C. Carrington,Elisabeth J. Chapman,Greg D. May,Jixian Zhai,Matthias Ganssmann,Sai Guna Ranjan Gurazada,Marcelo A German,Blake C. Meyers,Pamela J. Green,Ludmila Tyler,Jiajie Wu,James A. Thomson,Shan Chen,Henrik Vibe Scheller,Jesper Harholt,Peter Ulvskov,Jeffrey A. Kimbrel,Laura E. Bartley,Peijian Cao,Ki-Hong Jung,Manoj Sharma,Miguel E. Vega-Sánchez,Pamela C. Ronald,Chris Dardick,Stefanie De Bodt,Wim Verelst,Dirk Inzé,Maren Heese,Arp Schnittger,Xiaohan Yang,Udaya C. Kalluri,Gerald A. Tuskan,Zhihua Hua,Richard D. Vierstra,Yu Cui,Shuhong Ouyang,Qixin Sun,Zhiyong Liu,Alper Yilmaz,Erich Grotewold,Richard Sibout,Kian Hématy,Grégory Mouille,Herman Höfte,Todd P. Michael,Jérôme Pelloux,Devin O'Connor,James C. Schnable,Scott C. Rowe,Frank G. Harmon,Cynthia L. Cass,John C. Sedbrook,Mary E. Byrne,Sean Walsh,Janet Higgins,Pinghua Li,Thomas P. Brutnell,Turgay Unver,Hikmet Budak,Harry Belcram,Mathieu Charles,Boulos Chalhoub,Ivan Baxter +136 more
TL;DR: The high-quality genome sequence will help Brachypodium reach its potential as an important model system for developing new energy and food crops and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat.
Journal ArticleDOI
Massive Analysis of Rice Small RNAs: Mechanistic Implications of Regulated MicroRNAs and Variants for Differential Target RNA Cleavage
Dong-Hoon Jeong,Sunhee Park,Jixian Zhai,Sai Guna Ranjan Gurazada,Emanuele De Paoli,Blake C. Meyers,Pamela J. Green +6 more
TL;DR: This massive analysis of rice small RNAs evaluated annotated microRNAs (miRNAs) and identified new miRNA family members with distinct sequences and organ-preferential expression that provide new insight about how an agriculturally important rice phenotype could be regulated in the panicle.
Journal ArticleDOI
RNA polymerase V-dependent small RNAs in Arabidopsis originate from small, intergenic loci including most SINE repeats
Tzuu-fen Lee,Sai Guna Ranjan Gurazada,Jixian Zhai,Shengben Li,Stacey A. Simon,Marjori Matzke,Xuemei Chen,Blake C. Meyers +7 more
TL;DR: The results suggest that RNAP V affects siRNA production from genomic loci with features dissimilar to known RNAP IV-dependent loci, and may target and silence a set of small, intergenic transposable elements located in dispersed genomic regions for silencing.
Journal ArticleDOI
RNA-directed DNA methylation and plant development require an IWR1-type transcription factor
Tatsuo Kanno,Etienne Bucher,Lucia Daxinger,Bruno Huettel,David P. Kreil,Frank Breinig,Frank Breinig,Marc Lind,Marc Lind,Manfred J. Schmitt,Manfred J. Schmitt,Stacey A. Simon,Stacey A. Simon,Sai Guna Ranjan Gurazada,Sai Guna Ranjan Gurazada,Blake C. Meyers,Blake C. Meyers,Zdravko J. Lorković,Zdravko J. Lorković,Antonius J. M. Matzke,Marjori Matzke +20 more
TL;DR: A genetic screen designed to reveal factors that are important for RdDM in a developmental context in Arabidopsis identified DMS4, which might be a regulatory factor for several RNA polymerases, thus explaining its diverse roles in the plant.
Journal ArticleDOI
Next-Generation Sequence Databases: RNA and Genomic Informatics Resources for Plants
Mayumi Nakano,Mayumi Nakano,Kevin McCormick,Caghan Demirci,Feray Demirci,Feray Demirci,Sai Guna Ranjan Gurazada,Sai Guna Ranjan Gurazada,Deepti Ramachandruni,Deepti Ramachandruni,Ayush Dusia,Ayush Dusia,Joshua A. Rothhaupt,Joshua A. Rothhaupt,Blake C. Meyers,Blake C. Meyers,Blake C. Meyers +16 more
TL;DR: Graphical and analytical tools, including a new viewer and a query page for the analysis of phased small RNAs are developed, particularly useful for understanding the complex small RNA pathways of plants.