J
Jesper Harholt
Researcher at University of Copenhagen
Publications - 64
Citations - 6900
Jesper Harholt is an academic researcher from University of Copenhagen. The author has contributed to research in topics: Cell wall & Mutant. The author has an hindex of 35, co-authored 61 publications receiving 5975 citations. Previous affiliations of Jesper Harholt include Carlsberg Laboratory & University of Copenhagen Faculty of Life Sciences.
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Journal ArticleDOI
Genome sequencing and analysis of the model grass Brachypodium distachyon
John P. Vogel,David F. Garvin,Todd C. Mockler,Jeremy Schmutz,Daniel S. Rokhsar,Michael W. Bevan,Kerrie Barry,Susan Lucas,Miranda Harmon-Smith,Kathleen Lail,Hope Tice,Jane Grimwood,Neil McKenzie,Naxin Huo,Yong Q. Gu,Gerard R. Lazo,Olin D. Anderson,Frank M. You,Ming-Cheng Luo,Jan Dvorak,Jonathan M. Wright,Melanie Febrer,Dominika Idziak,Robert Hasterok,Erika Lindquist,Mei Wang,Samuel E. Fox,Henry D. Priest,Sergei A. Filichkin,Scott A. Givan,Douglas W. Bryant,Jeff H. Chang,Haiyan Wu,Wei Wu,An-Ping Hsia,Patrick S. Schnable,Anantharaman Kalyanaraman,Brad Barbazuk,Todd P. Michael,Samuel P. Hazen,Jennifer N. Bragg,Debbie Laudencia-Chingcuanco,Yiqun Weng,Georg Haberer,Manuel Spannagl,Klaus F. X. Mayer,Thomas Rattei,Therese Mitros,Sang-Jik Lee,Jocelyn K. C. Rose,Lukas A. Mueller,Thomas L. York,Thomas Wicker,Jan P. Buchmann,Jaakko Tanskanen,Alan H. Schulman,Heidrun Gundlach,Michael W. Bevan,Antonio Costa de Oliveira,Luciano da C. Maia,William R. Belknap,Ning Jiang,Jinsheng Lai,Liucun Zhu,Jianxin Ma,Cheng Sun,Ellen J. Pritham,Jérôme Salse,Florent Murat,Michael Abrouk,Rémy Bruggmann,Joachim Messing,Noah Fahlgren,Christopher M. Sullivan,James C. Carrington,Elisabeth J. Chapman,Greg D. May,Jixian Zhai,Matthias Ganssmann,Sai Guna Ranjan Gurazada,Marcelo A German,Blake C. Meyers,Pamela J. Green,Ludmila Tyler,Jiajie Wu,James A. Thomson,Shan Chen,Henrik Vibe Scheller,Jesper Harholt,Peter Ulvskov,Jeffrey A. Kimbrel,Laura E. Bartley,Peijian Cao,Ki-Hong Jung,Manoj Sharma,Miguel E. Vega-Sánchez,Pamela C. Ronald,Chris Dardick,Stefanie De Bodt,Wim Verelst,Dirk Inzé,Maren Heese,Arp Schnittger,Xiaohan Yang,Udaya C. Kalluri,Gerald A. Tuskan,Zhihua Hua,Richard D. Vierstra,Yu Cui,Shuhong Ouyang,Qixin Sun,Zhiyong Liu,Alper Yilmaz,Erich Grotewold,Richard Sibout,Kian Hématy,Grégory Mouille,Herman Höfte,Todd P. Michael,Jérôme Pelloux,Devin O'Connor,James C. Schnable,Scott C. Rowe,Frank G. Harmon,Cynthia L. Cass,John C. Sedbrook,Mary E. Byrne,Sean Walsh,Janet Higgins,Pinghua Li,Thomas P. Brutnell,Turgay Unver,Hikmet Budak,Harry Belcram,Mathieu Charles,Boulos Chalhoub,Ivan Baxter +136 more
TL;DR: The high-quality genome sequence will help Brachypodium reach its potential as an important model system for developing new energy and food crops and establishes a template for analysis of the large genomes of economically important pooid grasses such as wheat.
Journal ArticleDOI
The Selaginella genome identifies genetic changes associated with the evolution of vascular plants.
Jo Ann Banks,Tomoaki Nishiyama,Mitsuyasu Hasebe,Mitsuyasu Hasebe,John L. Bowman,John L. Bowman,Michael Gribskov,Claude W. dePamphilis,Victor A. Albert,Naoki Aono,Tsuyoshi Aoyama,Tsuyoshi Aoyama,Barbara A. Ambrose,Neil W. Ashton,Michael J. Axtell,Elizabeth I. Barker,Michael S. Barker,Jeffrey L. Bennetzen,Nicholas D. Bonawitz,Clint Chapple,Chaoyang Cheng,Luiz Gustavo Guedes Corrêa,Michael Dacre,Jeremy D. DeBarry,Ingo Dreyer,Marek Eliáš,Eric M. Engstrom,Mark Estelle,Liang Feng,Cédric Finet,Sandra K. Floyd,Wolf B. Frommer,Tomomichi Fujita,Lydia Gramzow,Michael Gutensohn,Michael Gutensohn,Jesper Harholt,Mitsuru Hattori,Mitsuru Hattori,Alexander Heyl,Tadayoshi Hirai,Yuji Hiwatashi,Yuji Hiwatashi,Masaki Ishikawa,Mineko Iwata,Kenneth G. Karol,Barbara Koehler,Uener Kolukisaoglu,Uener Kolukisaoglu,Minoru Kubo,Tetsuya Kurata,Sylvie Lalonde,Kejie Li,Ying Li,Ying Li,Amy Litt,Eric Lyons,Gerard Manning,Takeshi Maruyama,Todd P. Michael,Koji Mikami,Saori Miyazaki,Saori Miyazaki,Shin-Ichi Morinaga,Shin-Ichi Morinaga,TakashiMurata,TakashiMurata,Bernd Mueller-Roeber,David R. Nelson,Mari Obara,Yasuko Oguri,Richard G. Olmstead,Naoko T. Onodera,Bent O. Petersen,Birgit Pils,Michael J. Prigge,Stefan A. Rensing,Diego Mauricio Riaño-Pachón,Diego Mauricio Riaño-Pachón,Alison W. Roberts,Yoshikatsu Sato,Henrik Vibe Scheller,Henrik Vibe Scheller,Burkhard Schulz,Christian Schulz,Eugene V. Shakirov,Nakako Shibagaki,Naoki Shinohara,Dorothy E. Shippen,Iben Sørensen,Iben Sørensen,Ryo Sotooka,Nagisa Sugimoto,Mamoru Sugita,Naomi Sumikawa,Milos Tanurdzic,Günter Theißen,Peter Ulvskov,Sachiko Wakazuki,Jing-Ke Weng,Jing-Ke Weng,William G.T. Willats,Daniel Wipf,Paul G. Wolf,Lixing Yang,Andreas Zimmer,Qihui Zhu,Therese Mitros,Uffe Hellsten,Dominique Loqué,Robert Otillar,Asaf Salamov,Jeremy Schmutz,Harris Shapiro,Erika Lindquist,Susan Lucas,Daniel S. Rokhsar,Daniel S. Rokhsar,Igor V. Grigoriev +118 more
TL;DR: The genome sequence of the lycophyte Selaginella moellendorffii (Selaginella), the first nonseed vascular plant genome reported, is reported, finding that the transition from a gametophytes- to a sporophyte-dominated life cycle required far fewer new genes than the Transition from a non Seed vascular to a flowering plant.
Journal ArticleDOI
Biosynthesis of pectin
TL;DR: The plant cell wall is composed of polysaccharides and proteins, which are often classified into cellulose, hemicelluloses, and pectin, and these
Journal ArticleDOI
The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization.
Tomoaki Nishiyama,Hidetoshi Sakayama,Jan de Vries,Jan de Vries,Henrik Buschmann,Denis Saint-Marcoux,Denis Saint-Marcoux,Kristian K. Ullrich,Fabian B. Haas,Lisa Vanderstraeten,Dirk Becker,Daniel Lang,Stanislav Vosolsobě,Stephane Rombauts,Per K.I. Wilhelmsson,Philipp Janitza,Ramona Kern,Alexander Heyl,Florian Rümpler,Luz Irina A. Calderón Villalobos,John M. Clay,Roman Skokan,Atsushi Toyoda,Yutaka Suzuki,Hiroshi Kagoshima,Elio Schijlen,Navindra Tajeshwar,Bruno Catarino,Alexander J. Hetherington,Assia Saltykova,Clémence Bonnot,Holger Breuninger,Aikaterini Symeonidi,Guru V. Radhakrishnan,Filip Van Nieuwerburgh,Dieter Deforce,Caren Chang,Kenneth G. Karol,Rainer Hedrich,Peter Ulvskov,Gernot Glöckner,Charles F. Delwiche,Jan Petrášek,Yves Van de Peer,Yves Van de Peer,Jiri Friml,Mary J. Beilby,Liam Dolan,Yuji Kohara,Sumio Sugano,Asao Fujiyama,Pierre-Marc Delaux,Marcel Quint,Marcel Quint,Günter Theißen,Martin Hagemann,Jesper Harholt,Christophe Dunand,Sabine Zachgo,Jane A. Langdale,Florian Maumus,Dominique Van Der Straeten,Sven B. Gould,Stefan A. Rensing +63 more
TL;DR: Transcriptomic analysis of sexual reproductive structures reveals intricate control by TFs, activity of the ROS gene network, and the ancestral use of plant-like storage and stress protection proteins in the zygote.
Journal ArticleDOI
Biosynthesis of pectin
TL;DR: Biochemical methods successfully led to the recent identification of a pectin biosynthetic galacturonosyltransferase (GAUT1), and recent functional genomics and mutant studies have allowed the identification of several biosynthetics enzymes involved in making different parts of pectIn several other cases, enzymes have been identified as involved inMaking pect in but because of ambiguity in the cell wall compositions of mutants and lack of direct biochemical evidence their specific activities are more uncertain.