National Ocean Service

About: National Ocean Service is a government organization based out in Silver Spring, Maryland, United States. It is known for research contribution in the topics: Algal bloom & Population. The organization has 500 authors who have published 643 publications receiving 46096 citations.

Using mummichog (Fundulus heteroclitus) arrays to monitor the effectiveness of remediation at a Superfund site in Charleston, South Carolina, USA

Abstract: We previously developed a cDNA array for mummichogs (Fundulus heteroclitus), an estuarine minnow, that is targeted for identifying differentially expressed genes from exposure to polycyclic aromatic hydrocarbons and several metals, including chromium. A chromium-contaminated Superfund site at Shipyard Creek in Charleston, South Carolina, USA, is undergoing remediation, providing us a unique opportunity to study the utility of arrays for monitoring the effectiveness of site remediation. Mummichogs were captured in Shipyard Creek in Charleston prior to remediation (2000) and after remediation began (2003 and 2005). Simultaneously, mummichogs were collected from a reference site at the Winyah Bay National Estuarine Research Reserve (NERR) in Georgetown, South Carolina, USA. The hepatic gene expression pattern of fish captured at Shipyard Creek in 2000 showed wide differences from the fish captured at NERR in 2000. Interestingly, as remediation progressed the gene expression pattern of mummichogs captured at Shipyard Creek became increasingly similar to those captured at NERR. The arrays acted as multidimensional biomarkers as the number of differentially expressed genes dropped from 22 in 2000 to four in 2003, and the magnitude of differential expression dropped from 3.2-fold in 2000 to no gene demonstrating a difference over 1.5-fold in 2003. Furthermore, the arrays indicated changes in the bioavailability of chromium caused by hydraulic dredging in the summer of 2005. This research is, to our knowledge, the first report using arrays as biomarkers for a weight-of-evidence hazard assessment and demonstrates that arrays can be used as multidimensional biomarkers to monitor site mitigation because the gene expression profile is associated with chromium bioavailability and body burden.

The role of cyanobacteria in Southern California salt marsh food webs

Abstract: Understanding wetland food webs is critical for effective habitat management, restoration and conservation. Microalgae are recognized as key food sources for marsh invertebrates but the importance of different groups under various conditions is rarely examined. We tested the hypothesis that faunal utilization of microalgae, and cyanobacteria in particular, is significant in Southern California created and natural salt marshes but varies with habitat type (creek bank versus marsh interior) and season (spring versus autumn). We used stable isotope analysis and mixing models (IsoSource) to compare food webs in adjacent young (created) and mature (natural) salt marshes. Isotopic values of some primary producers, macrofauna, epifauna, and fish demonstrated significant differences between the adjacent salt marshes. δ13C and δ34S values of the benthic microalgal community varied with taxonomic composition (diatoms versus cyanobacteria) and to a lesser extent with season. Depleted δ15N values of benthic diatoms and macroalgae indicated that N2 fixed within algal mats was recycled within the benthic algal community. Marsh fauna, including most major macrofauna taxal, Cerithidea, and Fundulus, also exhibited seasonal differences in isotopic composition, and Cerithidea and selected macrofauna (oligochaetes, polychaetes) from the marsh interior were more enriched in 13C and depleted in 15N than those from the creek bank. In the young marsh, the cyanobacteria contributed a minimum of 17–100% of the primary production in food webs supporting macrofauna, and cyanobacteria contributed at least 40% of the primary production included in Cerithidea and Fundulus food webs. A wider range of primary producers contributed to food webs in the mature marsh. Cyanobacteria were a greater source of trophic support for macrofauna from the marsh interior than the creek bank, whereas Spartina was a more important food source for creek bank macrofauna in both marshes. Insect larvae largely consumed cyanobacteria, whereas polychaetes exhibited greater utilization of Spartina. Phytoplankton was the primary food resource for mussels in both marshes. Although the spatial and temporal complexity of food webs has traditionally been collapsed into the study of relatively simplified food webs, isotope signatures reveal fine-scale patterns in food web structure that may be used to make more accurate assessments of ecosystem state. Accurate interpretation of marsh trophic structure using natural abundance stable isotopes requires fine-scale resolution in space and time, a large number of samples, and a high level of taxonomic resolution.

User-based skill assessment techniques for operational hydrodynamic forecast systems

Abstract: NOAA’s National Ocean Service (NOS) applies hydrodynamic models for the development, transition and implementation of operational forecast systems in US estuaries, ports, lakes and the coastal ocean. These models and systems have applications in the support of safe and efficient marine navigation and emergency response, as well as marine geospatial and ecological applications. As part of the forecast system development, skill assessment is required to evaluate each model system. A forecast model has to be ensured that it has been developed and implemented in a scientifically sound and operationally robust way, and its performance should meet or exceed target benchmarks before its products are approved for release to the public.This paper discusses a new approach for the development of standards and procedures for skill assessment of operational forecast systems, which are designed primarily to support marine transportation and emergency response. Accordingly, this skill assessment focuses on variables, st...

The role of 2,4-dihydroxyquinoline (DHQ) in Pseudomonas aeruginosa pathogenicity

Abstract: Bacteria synchronize group behaviors using quorum sensing, which is advantageous during an infection to thwart immune cell attack and resist deleterious changes in the environment. In Pseudomonas aeruginosa, the Pseudomonas quinolone signal (Pqs) quorum-sensing system is an important component of an interconnected intercellular communication network. Two alkylquinolones, 2-heptyl-4-quinolone (HHQ) and 2-heptyl-3-hydroxy-4-quinolone (PQS), activate transcriptional regulator PqsR to promote the production of quinolone signals and virulence factors. Our work focused on the most abundant quinolone produced from the Pqs system, 2,4-dihydroxyquinoline (DHQ), which was shown previously to sustain pyocyanin production and antifungal activity of P. aeruginosa. However, little is known about how DHQ affects P. aeruginosa pathogenicity. Using C. elegans as a model for P. aeruginosa infection, we found pqs mutants only able to produce DHQ maintained virulence towards the nematodes similar to wild-type. In addition, DHQ-only producing mutants displayed increased colonization of C. elegans and virulence factor production compared to a quinolone-null strain. DHQ also bound to PqsR and activated the transcription of pqs operon. More importantly, high extracellular concentration of DHQ was maintained in both aerobic and anaerobic growth. High levels of DHQ were also detected in the sputum samples of cystic fibrosis patients. Taken together, our findings suggest DHQ may play an important role in sustaining P. aeruginosa pathogenicity under oxygen-limiting conditions.

Rapid increases and extreme months in projections of United States high-tide flooding

Abstract: Coastal locations around the United States, particularly along the Atlantic coast, are experiencing recurrent flooding at high tide. Continued sea-level rise (SLR) will exacerbate the issue where present, and many more locations will begin to experience recurrent high-tide flooding (HTF) in the coming decades. Here we use established SLR scenarios and flooding thresholds to demonstrate how the combined effects of SLR and nodal cycle modulations of tidal amplitude lead to acute inflections in projections of future HTF. The mid-2030s, in particular, may see the onset of rapid increases in the frequency of HTF in multiple US coastal regions. We also show how annual cycles and sea-level anomalies lead to extreme seasons or months during which many days of HTF cluster together. Clustering can lead to critical frequencies of HTF occurring during monthly or seasonal periods one to two decades prior to being expected on an annual basis. High-tide flooding (HTF) is more likely with sea-level rise. Projections along the United States coastline, considering likely sea-level rise and tidal amplitude cycles, suggest increased HTF event clustering in time and rapid increases in annual HTF frequency as early as the mid-2030s.