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Mitochondrial damage elicits a TCDD-inducible poly(ADP-ribose) polymerase-mediated antiviral response

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TLDR
TIPARP is a viral RNA-sensing PRR that mediates antiviral responses triggered by BAX- and BAK1-dependent mitochondrial damage and typically localizes in the nucleus, but it accumulates in the cytoplasm after SINV infection, allowing targeting of cy toplasmic SinV RNA.
Abstract
The innate immune system senses RNA viruses by pattern recognition receptors (PRRs) and protects the host from virus infection. PRRs mediate the production of immune modulatory factors and direct the elimination of RNA viruses. Here, we show a unique PRR that mediates antiviral response. Tetrachlorodibenzo-p-dioxin (TCDD)-inducible poly(ADP ribose) polymerase (TIPARP), a Cysteine3 Histidine (CCCH)-type zinc finger-containing protein, binds to Sindbis virus (SINV) RNA via its zinc finger domain and recruits an exosome to induce viral RNA degradation. TIPARP typically localizes in the nucleus, but it accumulates in the cytoplasm after SINV infection, allowing targeting of cytoplasmic SINV RNA. Redistribution of TIPARP is induced by reactive oxygen species (ROS)-dependent oxidization of the nuclear pore that affects cytoplasmic-nuclear transport. BCL2-associated X protein (BAX) and BCL2 antagonist/killer 1 (BAK1), B-cell leukemia/lymphoma 2 (BCL2) family members, mediate mitochondrial damage to generate ROS after SINV infection. Thus, TIPARP is a viral RNA-sensing PRR that mediates antiviral responses triggered by BAX- and BAK1-dependent mitochondrial damage.

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Insights into the biogenesis, function, and regulation of ADP-ribosylation.

TL;DR: The functions of amino acid ADPr modifications and the ART proteins that make them, the nature of the chemical linkage between ADPr and its targets and how this impacts function and stability, and the way that ARTs select specific amino acids in targets to modify are discussed.
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The coronavirus macrodomain is required to prevent PARP-mediated inhibition of virus replication and enhancement of IFN expression.

TL;DR: It is demonstrated that the macrodomain is required to prevent PARP-mediated inhibition of coronavirus replication and enhancement of interferon production, suggesting that macrodomains counter cellular ADP-ribosylation.
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The impact of PARPs and ADP-ribosylation on inflammation and host–pathogen interactions

TL;DR: The current understanding of the mechanisms by which PARPs promote or suppress proinflammatory activation of macrophages, and various roles PARPs play in virus infections are given.
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Glucocorticoids, genes and brain function

TL;DR: A review of microarray reports revealed 88 genes whose transcription is consistently regulated by glucocorticoids (GCs), such as cortisol, corticosterone and dexamethasone, in the brain this article.
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PARPs and ADP-ribosylation in RNA biology: from RNA expression and processing to protein translation and proteostasis.

TL;DR: The role of PARP proteins and ADPRylation in all facets of this pathway, including gene regulation, mRNA processing, and protein abundance, is described.
References
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Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production.

TL;DR: It is shown that Atg16L1 (autophagy-related 16-like 1), which is implicated in Crohn's disease, regulates endotoxin-induced inflammasome activation in mice and is an essential component of the autophagic machinery responsible for control of the endot toxin-induced inflammatory immune response.
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Plat-E: an efficient and stable system for transient packaging of retroviruses.

TL;DR: Plat-E as mentioned in this paper is a cell line based on the 293T cell line, which uses EF1 alpha promoter and the Kozak consensus sequence upstream of the initiation codon to ensure high and stable expression of viral structural proteins.
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The roles of TLRs, RLRs and NLRs in pathogen recognition

TL;DR: Recent insights into pathogen sensing by PRRs are summarized and specific signaling pathways that lead to expression of genes that tailor immune responses to particular microbes are summarized.
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